FFCP PHASE1:Hg19::chrX:47446081..47446133,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_CU674427_5end | |||
|coexpression_cluster_id=C609 | |||
|description=CAGE_peak_1_at_CU674427_5end | |||
|id=chrX:47446081..47446133,- | |||
|ontology_enrichment_celltype=CL:0000055!3.19e-28!180;CL:0000057!1.41e-17!75;CL:0000048!4.18e-17!430;CL:0002371!1.06e-16!591;CL:0000723!5.62e-16!436;CL:0000034!7.93e-15!444;CL:0000680!8.12e-15!57;CL:0000056!8.12e-15!57;CL:0000355!8.12e-15!57;CL:0000548!1.53e-14!679;CL:0000004!1.53e-14!679;CL:0000255!1.53e-14!679;CL:0000144!1.63e-14!625;CL:0000183!4.10e-14!59;CL:0000012!8.01e-14!682;CL:0000187!1.04e-13!54;CL:0000393!1.94e-11!60;CL:0000211!1.94e-11!60;CL:0000192!2.98e-10!42;CL:0000514!2.98e-10!42;CL:0002320!8.04e-09!365;CL:0002334!2.69e-08!12;CL:0000134!1.66e-07!358;CL:0000003!2.12e-07!722;CL:0002494!2.65e-07!16;CL:0000359!3.26e-07!32;CL:0000222!4.10e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000134;9.37e-10;55!CL:0002334;1.63e-09;12!CL:0000187;7.37e-09;55!CL:0000723;1.85e-08;61!CL:0002494;2.18e-08;16!CL:0000048;3.01e-08;58!CL:0000192;3.55e-08;43!CL:0000057;5.14e-08;73!CL:0000359;5.77e-08;32!CL:0002320;1.68e-07;188!CL:0000393;4.02e-07;61!CL:0000211;4.02e-07;61!CL:0000034;8.33e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,8.04e-23,427;CL:0000723,2.33e-21,433;CL:0000057,9.19e-21,76;CL:0000034,7.81e-20,441;CL:0000680,3.60e-16,58;CL:0000056,3.60e-16,58;CL:0000355,3.60e-16,58;CL:0000187,6.91e-15,55;CL:0002320,7.26e-13,361;CL:0000393,2.85e-12,61;CL:0000211,2.85e-12,61;CL:0000134,4.31e-11,354;CL:0000192,7.16e-11,43;CL:0000514,7.16e-11,43;CL:0002334,1.69e-09,12;CL:0000219,1.12e-08,386;CL:0000359,2.35e-08,32;CL:0002494,2.49e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000355;2.02e-08;58!CL:0000514;3.55e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!7.65e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.05e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.20e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!3.49e-13!448;UBERON:0004120!3.49e-13!448;UBERON:0006603!3.49e-13!448;UBERON:0001134!3.72e-13!61;UBERON:0002036!3.72e-13!61;UBERON:0003082!3.72e-13!61;UBERON:0004290!1.09e-12!70;UBERON:0000914!1.30e-12!83;UBERON:0002329!1.30e-12!83;UBERON:0003077!1.30e-12!83;UBERON:0003059!1.30e-12!83;UBERON:0007282!1.30e-12!83;UBERON:0009618!1.30e-12!83;UBERON:0007285!1.30e-12!83;UBERON:0002385!2.89e-12!63;UBERON:0001015!2.89e-12!63;UBERON:0000383!2.89e-12!63;UBERON:0002204!1.34e-11!167;UBERON:0000486!7.33e-11!82;UBERON:0005256!2.37e-09!143;UBERON:0002384!8.06e-09!375;UBERON:0001013!7.57e-08!14;UBERON:0002100!5.85e-07!216;UBERON:0000468!7.86e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.36e-09;14!UBERON:0002384;2.07e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.64e-15,315;UBERON:0004120,1.64e-15,315;UBERON:0006603,1.64e-15,315;UBERON:0001134,1.53e-14,62;UBERON:0002036,1.53e-14,62;UBERON:0003082,1.53e-14,62;UBERON:0007524,4.07e-14,73;UBERON:0002329,4.79e-14,71;UBERON:0003059,4.79e-14,71;UBERON:0007282,4.79e-14,71;UBERON:0004290,4.79e-14,71;UBERON:0009618,4.79e-14,71;UBERON:0007503,9.11e-14,78;UBERON:0003077,1.50e-13,72;UBERON:0007285,1.50e-13,72;UBERON:0002385,1.88e-13,64;UBERON:0001015,1.88e-13,64;UBERON:0000383,1.88e-13,64;UBERON:0002384,7.30e-13,371;UBERON:0002204,7.48e-13,167;UBERON:0000486,1.38e-11,83;UBERON:0005256,2.03e-09,122;UBERON:0003104,8.26e-09,160;UBERON:0009142,8.26e-09,160;UBERON:0001013,8.72e-09,14;UBERON:0004872,2.18e-07,83;UBERON:0000948,3.24e-07,24;UBERON:0005498,3.24e-07,24;UBERON:0004140,3.24e-07,24;UBERON:0009881,3.24e-07,24;UBERON:0004141,3.24e-07,24;UBERON:0003084,3.24e-07,24;UBERON:0007005,3.24e-07,24;UBERON:0004139,3.24e-07,24;UBERON:0004291,3.24e-07,24;UBERON:0000490,5.96e-07,148 | |||
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| |||
|short_description=p1@CU674427 | |||
}} |
Revision as of 05:32, 23 January 2014
Short description: | p1@CU674427 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_CU674427_5end |
Coexpression cluster: | C609_Smooth_mesenchymal_Preadipocyte_Cardiac_Fibroblast_Osteoblast_tenocyte |
Association with transcript: | 0bp_to_CU674427_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 8.04e-23 | 427 |
somatic stem cell | 2.33e-21 | 433 |
fibroblast | 9.19e-21 | 76 |
stem cell | 7.81e-20 | 441 |
muscle precursor cell | 3.60e-16 | 58 |
myoblast | 3.60e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.60e-16 | 58 |
muscle cell | 6.91e-15 | 55 |
connective tissue cell | 7.26e-13 | 361 |
electrically responsive cell | 2.85e-12 | 61 |
electrically active cell | 2.85e-12 | 61 |
mesenchymal cell | 4.31e-11 | 354 |
smooth muscle cell | 7.16e-11 | 43 |
smooth muscle myoblast | 7.16e-11 | 43 |
preadipocyte | 1.69e-09 | 12 |
motile cell | 1.12e-08 | 386 |
vascular associated smooth muscle cell | 2.35e-08 | 32 |
cardiocyte | 2.49e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.20e-08 | 14 |