FFCP PHASE1:Hg19::chrX:73834449..73834481,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51132 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13429 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NVW2 | |||
|association_with_transcript=0bp_to_ENST00000332687,ENST00000349225,NM_016120,NM_183353,uc004ebu.2,uc004ebw.2_5end | |||
|description=CAGE_peak_1_at_RLIM_5end | |||
|id=chrX:73834449..73834481,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.62e-23!143;DOID:305!1.62e-16!106;DOID:162!2.82e-16!235;DOID:14566!3.42e-16!239;DOID:3095!6.75e-07!22;DOID:2994!6.75e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.43e-07;22!DOID:2994;5.43e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.59e-23,143;DOID:305,1.62e-16,106;DOID:162,3.03e-16,235;DOID:14566,3.76e-16,239;DOID:3095,6.74e-07,22;DOID:2994,6.74e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.71e-11!94;UBERON:0001016!5.71e-11!94;UBERON:0000062!6.58e-10!511;UBERON:0001017!8.48e-10!82;UBERON:0005743!1.32e-09!86;UBERON:0000955!1.70e-09!69;UBERON:0006238!1.70e-09!69;UBERON:0002616!1.56e-08!59;UBERON:0001049!6.07e-08!57;UBERON:0005068!6.07e-08!57;UBERON:0006241!6.07e-08!57;UBERON:0007135!6.07e-08!57;UBERON:0002780!9.17e-08!41;UBERON:0001890!9.17e-08!41;UBERON:0006240!9.17e-08!41;UBERON:0000924!1.73e-07!173;UBERON:0006601!1.73e-07!173;UBERON:0003080!2.36e-07!42;UBERON:0000033!2.48e-07!123;UBERON:0002346!4.20e-07!90;UBERON:0004121!9.39e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.72e-11,89;UBERON:0001017,4.14e-10,81;UBERON:0000955,7.76e-10,68;UBERON:0006238,7.76e-10,68;UBERON:0000073,1.52e-08,53;UBERON:0002616,1.52e-08,53;UBERON:0001049,2.78e-08,56;UBERON:0005068,2.78e-08,56;UBERON:0006241,2.78e-08,56;UBERON:0007135,2.78e-08,56;UBERON:0002780,9.16e-08,41;UBERON:0001890,9.16e-08,41;UBERON:0003080,9.16e-08,41;UBERON:0006240,9.16e-08,41;UBERON:0004121,1.91e-07,171;UBERON:0000924,1.91e-07,171;UBERON:0006601,1.91e-07,171;UBERON:0011216,2.44e-07,223 | |||
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| |||
|short_description=p1@RLIM | |||
}} |
Revision as of 06:08, 23 January 2014
Short description: | p1@RLIM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RLIM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000332687, ENST00000349225, NM_016120, NM_183353, uc004ebu.2, uc004ebw.2_5end |
EntrezGene: | RLIM |
HGNC: | 13429 |
UniProt: | Q9NVW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.72e-11 | 89 |
central nervous system | 4.14e-10 | 81 |
brain | 7.76e-10 | 68 |
future brain | 7.76e-10 | 68 |
regional part of nervous system | 1.52e-08 | 53 |
regional part of brain | 1.52e-08 | 53 |
neural tube | 2.78e-08 | 56 |
neural rod | 2.78e-08 | 56 |
future spinal cord | 2.78e-08 | 56 |
neural keel | 2.78e-08 | 56 |
regional part of forebrain | 9.16e-08 | 41 |
forebrain | 9.16e-08 | 41 |
anterior neural tube | 9.16e-08 | 41 |
future forebrain | 9.16e-08 | 41 |
ectoderm-derived structure | 1.91e-07 | 171 |
ectoderm | 1.91e-07 | 171 |
presumptive ectoderm | 1.91e-07 | 171 |
organ system subdivision | 2.44e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.59e-23 | 143 |
carcinoma | 1.62e-16 | 106 |
cancer | 3.03e-16 | 235 |
disease of cellular proliferation | 3.76e-16 | 239 |
germ cell and embryonal cancer | 6.74e-07 | 22 |
germ cell cancer | 6.74e-07 | 22 |