FFCP PHASE1:Hg19::chr10:11220716..11220733,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:11220716..11220733,-
|short_description=p@chr10:11220716..11220733,-
|description=CAGE_peak_at_chr10:11220716..11220733,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:11220716..11220733,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_at_chr10:11220716..11220733,- | |||
|id=chr10:11220716..11220733,- | |||
|ontology_enrichment_celltype=CL:0000037!5.74e-52!172;CL:0000566!5.74e-52!172;CL:0000988!4.55e-49!182;CL:0000738!3.22e-48!140;CL:0002032!1.14e-45!165;CL:0000837!1.14e-45!165;CL:0002087!1.31e-41!119;CL:0002031!4.24e-40!124;CL:0000763!8.00e-25!112;CL:0000049!8.00e-25!112;CL:0000766!1.78e-22!76;CL:0002057!9.16e-22!42;CL:0000839!1.49e-20!70;CL:0000557!4.15e-20!71;CL:0000838!8.89e-20!52;CL:0000860!9.80e-20!45;CL:0000542!3.15e-19!53;CL:0000051!3.15e-19!53;CL:0002194!1.54e-18!63;CL:0000576!1.54e-18!63;CL:0000040!1.54e-18!63;CL:0000559!1.54e-18!63;CL:0002009!1.14e-17!65;CL:0002393!4.57e-14!9;CL:0002397!4.57e-14!9;CL:0000134!6.14e-14!358;CL:0002320!3.21e-13!365;CL:0000791!5.85e-12!18;CL:0000789!5.85e-12!18;CL:0002420!5.85e-12!18;CL:0002419!5.85e-12!18;CL:0000790!5.85e-12!18;CL:0000084!7.56e-12!25;CL:0000827!7.56e-12!25;CL:0000219!1.14e-11!390;CL:0000624!1.84e-11!6;CL:0000048!9.59e-09!430;CL:0000723!2.54e-08!436;CL:0000034!3.13e-08!444;CL:0000623!7.95e-07!3;CL:0000825!7.95e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.14e-28;6!CL:0000791;1.78e-20;18!CL:0000789;1.78e-20;18!CL:0002419;1.78e-20;18!CL:0000623;4.71e-16;3!CL:0000898;4.40e-15;3!CL:0000767;5.08e-15;3!CL:0000084;2.77e-14;25!CL:0000542;1.50e-12;53!CL:0000815;2.07e-10;2!CL:0000792;2.07e-10;2!CL:0002677;2.07e-10;2!CL:0002087;8.62e-09;104!CL:0000576;3.75e-08;48!CL:0000860;2.15e-07;33!CL:0002057;2.15e-07;33!CL:0002393;2.27e-07;6!CL:0002397;2.27e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.24e-30,136;CL:0002087,7.19e-30,115;CL:0000037,7.77e-29,168;CL:0000624,8.03e-29,6;CL:0000988,5.35e-27,177;CL:0002032,1.72e-26,161;CL:0000837,1.72e-26,161;CL:0002031,3.12e-26,120;CL:0000838,7.31e-23,52;CL:0000542,2.34e-22,53;CL:0000051,2.34e-22,53;CL:0000791,1.71e-20,18;CL:0000789,1.71e-20,18;CL:0002420,1.71e-20,18;CL:0002419,1.71e-20,18;CL:0000790,1.71e-20,18;CL:0000623,4.62e-16,3;CL:0000825,4.62e-16,3;CL:0000898,4.53e-15,3;CL:0000767,7.29e-15,3;CL:0000084,2.69e-14,25;CL:0000827,2.69e-14,25;CL:0000860,3.75e-13,42;CL:0002057,3.75e-13,42;CL:0000473,3.29e-11,48;CL:0000234,3.29e-11,48;CL:0000766,7.99e-11,72;CL:0000815,2.08e-10,2;CL:0000792,2.08e-10,2;CL:0002677,2.08e-10,2;CL:0000134,9.34e-10,354;CL:0002320,2.02e-09,361;CL:0002194,1.68e-08,59;CL:0000576,1.68e-08,59;CL:0000040,1.68e-08,59;CL:0000559,1.68e-08,59;CL:0002393,1.98e-08,9;CL:0002397,1.98e-08,9;CL:0000763,2.02e-08,108;CL:0000049,2.02e-08,108;CL:0000219,3.07e-08,386;CL:0002009,3.75e-08,61;CL:0000839,2.24e-07,66;CL:0000557,3.11e-07,67;CL:0000048,8.50e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000790;1.78e-20;18!CL:0000051;1.50e-12;53!CL:0002057;7.06e-10;42 | |||
|ontology_enrichment_disease=DOID:1240!3.55e-08!39;DOID:2531!8.87e-07!51;DOID:0060083!8.87e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.78e-20!102;UBERON:0003061!8.78e-20!102;UBERON:0002371!5.63e-18!80;UBERON:0002193!1.00e-17!112;UBERON:0001474!5.89e-16!86;UBERON:0002405!4.00e-13!115;UBERON:0002384!3.00e-12!375;UBERON:0004765!5.12e-12!101;UBERON:0001434!5.12e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.81e-09,371;UBERON:0002371,2.39e-07,76;UBERON:0002390,3.22e-07,98;UBERON:0003061,3.22e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,1.52826811495903,1.39571002064908,1.18066171970519,3.14691421479123,1.15148819429164,2.47705797305722,0,0,0,0,0,2.64240395401362,1.66198622559563,1.60435557976113,1.95309783644267,0,0.647787332037959,0,0.290796477559129,0,0,0,0,0.619412741790207,1.1507695692886,0.512321413058201,2.36482229888585,1.37898272294647,0.645484683583826,0,0,0,0.224723484445085,0.918251677112708,0.962787081228281,0,0.329851300186716,1.39624560335142,1.27867425159808,0,0,0,1.25624332628372,1.0429658368404,1.95469960234605,0,0,0,0.845021145247767,0.425208599930087,0.838634582033504,0.336985893439485,0.600707571366025,0,1.42506371870624,0.59675003159727,0.182664153764634,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,1.76171156811282,1.52909291250092,0,0.560508562981536,0,1.7703879310245,4.71612915298998,7.19605246498282,0,1.30368906653436,1.89379122293893,0,0.334231370655521,2.65145316727353,0.886135578334485,1.89562704635511,0.384273959177026,0.130059347559878,0,0.552700035571697,0.289803085735052,2.22429844743091,1.07016331235885,1.04535523804977,0.226618685395132,4.21542542962113,4.81078423675682,3.28925599625354,0,0,0,0.301150238155546,0.383959833463255,0,0,0,4.03213486449465,5.34880391567015,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,5.71389204585589,6.90008239550455,8.08561128562415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.620304078368662,1.72571360654893,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0.213425530045242,0,0.997896857164083,0.383010740264733,0,0.649243880549111,0,0.912938716132769,0.156679895773023,0,0.169291777801603,2.08764497634809,0.201799707191048,0,0,0.307240764308458,0.447352215784832,0.667396566847634,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,2.55786185113436,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.247127877893006,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0.248298857183432,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,1.52826811495903,1.39571002064908,1.18066171970519,3.14691421479123,1.15148819429164,2.47705797305722,0,0,0,0,0,2.64240395401362,1.66198622559563,1.60435557976113,1.95309783644267,0,0.647787332037959,0,0.290796477559129,0,0,0,0,0.619412741790207,1.1507695692886,0.512321413058201,2.36482229888585,1.37898272294647,0.645484683583826,0,0,0,0.224723484445085,0.918251677112708,0.962787081228281,0,0.329851300186716,1.39624560335142,1.27867425159808,0,0,0,1.25624332628372,1.0429658368404,1.95469960234605,0,0,0,0.845021145247767,0.425208599930087,0.838634582033504,0.336985893439485,0.600707571366025,0,1.42506371870624,0.59675003159727,0.182664153764634,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,1.76171156811282,1.52909291250092,0,0.560508562981536,0,1.7703879310245,4.71612915298998,7.19605246498282,0,1.30368906653436,1.89379122293893,0,0.334231370655521,2.65145316727353,0.886135578334485,1.89562704635511,0.384273959177026,0.130059347559878,0,0.552700035571697,0.289803085735052,2.22429844743091,1.07016331235885,1.04535523804977,0.226618685395132,4.21542542962113,4.81078423675682,3.28925599625354,0,0,0,0.301150238155546,0.383959833463255,0,0,0,4.03213486449465,5.34880391567015,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,5.71389204585589,6.90008239550455,8.08561128562415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.620304078368662,1.72571360654893,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0.213425530045242,0,0.997896857164083,0.383010740264733,0,0.649243880549111,0,0.912938716132769,0.156679895773023,0,0.169291777801603,2.08764497634809,0.201799707191048,0,0,0.307240764308458,0.447352215784832,0.667396566847634,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,2.55786185113436,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.247127877893006,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0.248298857183432,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr10:11220716..11220733,- | |||
}} | }} |
Latest revision as of 10:22, 23 July 2015
Short description: | p@chr10:11220716..11220733, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:11220716..11220733, - |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.81e-09 | 371 |
bone marrow | 2.39e-07 | 76 |
hematopoietic system | 3.22e-07 | 98 |
blood island | 3.22e-07 | 98 |