FFCP PHASE1:Hg19::chr10:17279298..17279334,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_CU674071_5end | |association_with_transcript=-29bp_to_CU674071_5end | ||
|cluster_id=chr10:17279298..17279334,- | |||
|coexpression_cluster_id=C490 | |coexpression_cluster_id=C490 | ||
|description=CAGE_peak_1_at_CU674071_5end | |description=CAGE_peak_1_at_CU674071_5end | ||
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|ontology_enrichment_celltype=CL:0002371!2.90e-32!591;CL:0000055!5.32e-30!180;CL:0000144!1.43e-29!625;CL:0000048!3.91e-25!430;CL:0000723!1.26e-23!436;CL:0000034!7.47e-22!444;CL:0000548!2.31e-21!679;CL:0000004!2.31e-21!679;CL:0000255!2.31e-21!679;CL:0000012!4.67e-21!682;CL:0000003!2.88e-18!722;CL:0000057!3.98e-17!75;CL:0002320!1.21e-13!365;CL:0000222!3.10e-13!119;CL:0000680!1.63e-12!57;CL:0000056!1.63e-12!57;CL:0000355!1.63e-12!57;CL:0000183!5.64e-12!59;CL:0000219!5.89e-12!390;CL:0000134!6.77e-12!358;CL:0000187!6.92e-12!54;CL:0000393!7.21e-12!60;CL:0000211!7.21e-12!60;CL:0000192!1.14e-09!42;CL:0000514!1.14e-09!42;CL:0002620!3.35e-09!23;CL:0002009!5.61e-09!65;CL:0002057!1.23e-08!42;CL:0002194!1.79e-08!63;CL:0000576!1.79e-08!63;CL:0000040!1.79e-08!63;CL:0000559!1.79e-08!63;CL:0000359!9.51e-08!32;CL:0000860!1.44e-07!45;CL:0000557!2.91e-07!71 | |ontology_enrichment_celltype=CL:0002371!2.90e-32!591;CL:0000055!5.32e-30!180;CL:0000144!1.43e-29!625;CL:0000048!3.91e-25!430;CL:0000723!1.26e-23!436;CL:0000034!7.47e-22!444;CL:0000548!2.31e-21!679;CL:0000004!2.31e-21!679;CL:0000255!2.31e-21!679;CL:0000012!4.67e-21!682;CL:0000003!2.88e-18!722;CL:0000057!3.98e-17!75;CL:0002320!1.21e-13!365;CL:0000222!3.10e-13!119;CL:0000680!1.63e-12!57;CL:0000056!1.63e-12!57;CL:0000355!1.63e-12!57;CL:0000183!5.64e-12!59;CL:0000219!5.89e-12!390;CL:0000134!6.77e-12!358;CL:0000187!6.92e-12!54;CL:0000393!7.21e-12!60;CL:0000211!7.21e-12!60;CL:0000192!1.14e-09!42;CL:0000514!1.14e-09!42;CL:0002620!3.35e-09!23;CL:0002009!5.61e-09!65;CL:0002057!1.23e-08!42;CL:0002194!1.79e-08!63;CL:0000576!1.79e-08!63;CL:0000040!1.79e-08!63;CL:0000559!1.79e-08!63;CL:0000359!9.51e-08!32;CL:0000860!1.44e-07!45;CL:0000557!2.91e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.47e-09;23!CL:0000860;2.48e-08;33!CL:0002057;2.48e-08;33!CL:0000473;3.04e-08;39!CL:0000234;3.04e-08;39!CL:0000057;6.19e-08;73!CL:0000359;1.45e-07;32!CL:0000192;3.59e-07;43!CL:0000187;5.38e-07;55!CL:0000393;6.52e-07;61!CL:0000211;6.52e-07;61!CL:0000134;7.50e-07;55 | |ontology_enrichment_celltype_v019=CL:0002620;2.47e-09;23!CL:0000860;2.48e-08;33!CL:0002057;2.48e-08;33!CL:0000473;3.04e-08;39!CL:0000234;3.04e-08;39!CL:0000057;6.19e-08;73!CL:0000359;1.45e-07;32!CL:0000192;3.59e-07;43!CL:0000187;5.38e-07;55!CL:0000393;6.52e-07;61!CL:0000211;6.52e-07;61!CL:0000134;7.50e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.03e-25,427;CL:0000723,2.21e-24,433;CL:0000034,2.04e-22,441;CL:0000057,4.73e-18,76;CL:0000222,1.41e-13,121;CL:0002320,1.46e-13,361;CL:0000680,2.79e-13,58;CL:0000056,2.79e-13,58;CL:0000355,2.79e-13,58;CL:0000187,1.28e-12,55;CL:0000393,1.87e-12,61;CL:0000211,1.87e-12,61;CL:0000219,3.40e-12,386;CL:0000134,8.96e-12,354;CL:0000473,3.41e-10,48;CL:0000234,3.41e-10,48;CL:0000192,3.93e-10,43;CL:0000514,3.93e-10,43;CL:0002009,6.02e-10,61;CL:0002194,2.13e-09,59;CL:0000576,2.13e-09,59;CL:0000040,2.13e-09,59;CL:0000559,2.13e-09,59;CL:0002620,2.38e-09,23;CL:0000860,1.12e-08,42;CL:0002057,1.12e-08,42;CL:0000557,6.57e-08,67;CL:0000359,7.05e-08,32;CL:0000839,5.05e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000355;1.97e-07;58!CL:0000514;3.59e-07;43 | |ontology_enrichment_development_v019=CL:0000355;1.97e-07;58!CL:0000514;3.59e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;1.41e-07;42!UBERON:0003509;1.41e-07;42!UBERON:0004572;1.41e-07;42!UBERON:0004573;2.28e-07;33!UBERON:0004571;2.28e-07;33!UBERON:0001013;3.94e-07;14!UBERON:0002384;6.71e-07;198!UBERON:0007500;7.78e-07;56!UBERON:0001981;7.78e-07;56!UBERON:0004537;7.78e-07;56 | |ontology_enrichment_uberon_v019=UBERON:0001637;1.41e-07;42!UBERON:0003509;1.41e-07;42!UBERON:0004572;1.41e-07;42!UBERON:0004573;2.28e-07;33!UBERON:0004571;2.28e-07;33!UBERON:0001013;3.94e-07;14!UBERON:0002384;6.71e-07;198!UBERON:0007500;7.78e-07;56!UBERON:0001981;7.78e-07;56!UBERON:0004537;7.78e-07;56 | ||
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| ||
|short_description=p1@CU674071 | |short_description=p1@CU674071 | ||
}} | }} |
Latest revision as of 12:18, 23 July 2015
Short description: | p1@CU674071 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU674071_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | -29bp_to_CU674071_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.03e-25 | 427 |
somatic stem cell | 2.21e-24 | 433 |
stem cell | 2.04e-22 | 441 |
fibroblast | 4.73e-18 | 76 |
mesodermal cell | 1.41e-13 | 121 |
connective tissue cell | 1.46e-13 | 361 |
muscle precursor cell | 2.79e-13 | 58 |
myoblast | 2.79e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.79e-13 | 58 |
muscle cell | 1.28e-12 | 55 |
electrically responsive cell | 1.87e-12 | 61 |
electrically active cell | 1.87e-12 | 61 |
motile cell | 3.40e-12 | 386 |
mesenchymal cell | 8.96e-12 | 354 |
defensive cell | 3.41e-10 | 48 |
phagocyte | 3.41e-10 | 48 |
smooth muscle cell | 3.93e-10 | 43 |
smooth muscle myoblast | 3.93e-10 | 43 |
macrophage dendritic cell progenitor | 6.02e-10 | 61 |
monopoietic cell | 2.13e-09 | 59 |
monocyte | 2.13e-09 | 59 |
monoblast | 2.13e-09 | 59 |
promonocyte | 2.13e-09 | 59 |
skin fibroblast | 2.38e-09 | 23 |
classical monocyte | 1.12e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-08 | 42 |
granulocyte monocyte progenitor cell | 6.57e-08 | 67 |
vascular associated smooth muscle cell | 7.05e-08 | 32 |
myeloid lineage restricted progenitor cell | 5.05e-07 | 66 |