FFCP PHASE1:Hg19::chr10:17515827..17515838,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17515827..17515838,+ | |||
|description=CAGE_peak_at_chr10:17515827..17515838,+ | |description=CAGE_peak_at_chr10:17515827..17515838,+ | ||
|id=chr10:17515827..17515838,+ | |id=chr10:17515827..17515838,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.79e-46!112;CL:0000049!1.79e-46!112;CL:0000037!3.45e-37!172;CL:0000566!3.45e-37!172;CL:0002032!6.72e-35!165;CL:0000837!6.72e-35!165;CL:0000988!1.08e-34!182;CL:0000766!3.08e-25!76;CL:0000839!1.74e-20!70;CL:0000557!3.91e-20!71;CL:0002057!1.58e-17!42;CL:0000738!1.35e-16!140;CL:0002194!3.68e-16!63;CL:0000576!3.68e-16!63;CL:0000040!3.68e-16!63;CL:0000559!3.68e-16!63;CL:0000860!3.76e-16!45;CL:0002009!1.50e-15!65;CL:0000767!6.71e-14!3;CL:0000134!1.79e-13!358;CL:0002031!2.29e-13!124;CL:0002320!4.76e-13!365;CL:0000219!1.49e-11!390;CL:0002087!2.95e-11!119;CL:0000048!1.50e-10!430;CL:0000723!2.78e-10!436;CL:0000034!6.15e-10!444;CL:0002274!6.18e-09!5;CL:0000457!6.18e-09!5;CL:0002191!6.18e-09!5;CL:0000097!6.18e-09!5;CL:0000831!6.18e-09!5;CL:0002028!6.18e-09!5;CL:0000840!1.58e-07!5;CL:0001029!1.58e-07!5 | |ontology_enrichment_celltype=CL:0000763!1.79e-46!112;CL:0000049!1.79e-46!112;CL:0000037!3.45e-37!172;CL:0000566!3.45e-37!172;CL:0002032!6.72e-35!165;CL:0000837!6.72e-35!165;CL:0000988!1.08e-34!182;CL:0000766!3.08e-25!76;CL:0000839!1.74e-20!70;CL:0000557!3.91e-20!71;CL:0002057!1.58e-17!42;CL:0000738!1.35e-16!140;CL:0002194!3.68e-16!63;CL:0000576!3.68e-16!63;CL:0000040!3.68e-16!63;CL:0000559!3.68e-16!63;CL:0000860!3.76e-16!45;CL:0002009!1.50e-15!65;CL:0000767!6.71e-14!3;CL:0000134!1.79e-13!358;CL:0002031!2.29e-13!124;CL:0002320!4.76e-13!365;CL:0000219!1.49e-11!390;CL:0002087!2.95e-11!119;CL:0000048!1.50e-10!430;CL:0000723!2.78e-10!436;CL:0000034!6.15e-10!444;CL:0002274!6.18e-09!5;CL:0000457!6.18e-09!5;CL:0002191!6.18e-09!5;CL:0000097!6.18e-09!5;CL:0000831!6.18e-09!5;CL:0002028!6.18e-09!5;CL:0000840!1.58e-07!5;CL:0001029!1.58e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000840;3.60e-17;5!CL:0000763;6.48e-13;100!CL:0000990;1.20e-11;8!CL:0000860;6.45e-11;33!CL:0002057;6.45e-11;33!CL:0000097;4.98e-10;5!CL:0000451;1.25e-09;10!CL:0000473;6.52e-09;39!CL:0000234;6.52e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.07e-30,108;CL:0000049,1.07e-30,108;CL:0002032,5.76e-20,161;CL:0000837,5.76e-20,161;CL:0000037,4.75e-19,168;CL:0000839,2.26e-18,66;CL:0000557,4.42e-18,67;CL:0000988,5.62e-18,177;CL:0000840,4.37e-17,5;CL:0001029,4.37e-17,5;CL:0000766,9.64e-17,72;CL:0002194,1.12e-13,59;CL:0000576,1.12e-13,59;CL:0000040,1.12e-13,59;CL:0000559,1.12e-13,59;CL:0002009,3.35e-13,61;CL:0000990,1.36e-11,8;CL:0000097,4.98e-10,5;CL:0002028,4.98e-10,5;CL:0000451,1.38e-09,10;CL:0002031,1.69e-09,120;CL:0000860,4.96e-09,42;CL:0002057,4.96e-09,42;CL:0000738,3.31e-08,136;CL:0000134,7.48e-08,354;CL:0000473,7.48e-08,48;CL:0000234,7.48e-08,48;CL:0002320,1.18e-07,361;CL:0000219,5.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;4.35e-10;108 | |||
|ontology_enrichment_disease=DOID:1240!2.05e-25!39;DOID:8692!3.42e-25!31;DOID:2531!1.48e-18!51;DOID:0060083!1.48e-18!51;DOID:1036!3.27e-14!8 | |ontology_enrichment_disease=DOID:1240!2.05e-25!39;DOID:8692!3.42e-25!31;DOID:2531!1.48e-18!51;DOID:0060083!1.48e-18!51;DOID:1036!3.27e-14!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.88e-22;8!DOID:8692;1.15e-16;31!DOID:8552;3.85e-12;1!DOID:1240;7.48e-11;39!DOID:2531;8.80e-07;51!DOID:0060083;8.80e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.46e-22,8;DOID:8692,5.03e-17,31;DOID:1240,2.08e-13,39;DOID:8552,4.81e-12,1;DOID:2531,4.21e-10,51;DOID:0060083,4.21e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.36e-19!80;UBERON:0001474!1.13e-17!86;UBERON:0002390!2.45e-17!102;UBERON:0003061!2.45e-17!102;UBERON:0002193!2.52e-15!112;UBERON:0004765!2.40e-14!101;UBERON:0001434!2.40e-14!101;UBERON:0002405!2.37e-13!115;UBERON:0002384!1.81e-12!375;UBERON:0002204!1.08e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!2.36e-19!80;UBERON:0001474!1.13e-17!86;UBERON:0002390!2.45e-17!102;UBERON:0003061!2.45e-17!102;UBERON:0002193!2.52e-15!112;UBERON:0004765!2.40e-14!101;UBERON:0001434!2.40e-14!101;UBERON:0002405!2.37e-13!115;UBERON:0002384!1.81e-12!375;UBERON:0002204!1.08e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.53e-16,76;UBERON:0001474,1.51e-14,82;UBERON:0004765,3.90e-13,90;UBERON:0002405,1.14e-12,93;UBERON:0002390,5.96e-12,98;UBERON:0003061,5.96e-12,98;UBERON:0001434,1.10e-11,100;UBERON:0002193,1.03e-10,108;UBERON:0002384,2.22e-07,371 | |||
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| ||
|short_description=p@chr10:17515827..17515838,+ | |short_description=p@chr10:17515827..17515838,+ | ||
}} | }} |
Latest revision as of 12:20, 23 July 2015
Short description: | p@chr10:17515827..17515838, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17515827..17515838, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.07e-30 | 108 |
common myeloid progenitor | 1.07e-30 | 108 |
hematopoietic oligopotent progenitor cell | 5.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-20 | 161 |
hematopoietic stem cell | 4.75e-19 | 168 |
myeloid lineage restricted progenitor cell | 2.26e-18 | 66 |
granulocyte monocyte progenitor cell | 4.42e-18 | 67 |
hematopoietic cell | 5.62e-18 | 177 |
immature conventional dendritic cell | 4.37e-17 | 5 |
common dendritic progenitor | 4.37e-17 | 5 |
myeloid leukocyte | 9.64e-17 | 72 |
monopoietic cell | 1.12e-13 | 59 |
monocyte | 1.12e-13 | 59 |
monoblast | 1.12e-13 | 59 |
promonocyte | 1.12e-13 | 59 |
macrophage dendritic cell progenitor | 3.35e-13 | 61 |
conventional dendritic cell | 1.36e-11 | 8 |
mast cell | 4.98e-10 | 5 |
basophil mast progenitor cell | 4.98e-10 | 5 |
dendritic cell | 1.38e-09 | 10 |
hematopoietic lineage restricted progenitor cell | 1.69e-09 | 120 |
classical monocyte | 4.96e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.96e-09 | 42 |
leukocyte | 3.31e-08 | 136 |
mesenchymal cell | 7.48e-08 | 354 |
defensive cell | 7.48e-08 | 48 |
phagocyte | 7.48e-08 | 48 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 5.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.53e-16 | 76 |
bone element | 1.51e-14 | 82 |
skeletal element | 3.90e-13 | 90 |
immune system | 1.14e-12 | 93 |
hematopoietic system | 5.96e-12 | 98 |
blood island | 5.96e-12 | 98 |
skeletal system | 1.10e-11 | 100 |
hemolymphoid system | 1.03e-10 | 108 |
connective tissue | 2.22e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.46e-22 | 8 |
myeloid leukemia | 5.03e-17 | 31 |
leukemia | 2.08e-13 | 39 |
chronic myeloid leukemia | 4.81e-12 | 1 |
hematologic cancer | 4.21e-10 | 51 |
immune system cancer | 4.21e-10 | 51 |