FFCP PHASE1:Hg19::chr10:28820520..28820523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:28820520..28820523,- | |||
|description=CAGE_peak_at_chr10:28820520..28820523,- | |description=CAGE_peak_at_chr10:28820520..28820523,- | ||
|id=chr10:28820520..28820523,- | |id=chr10:28820520..28820523,- | ||
|ontology_enrichment_celltype=CL:0002087!6.47e-13!119;CL:0002031!9.41e-12!124;CL:0000738!1.39e-11!140;CL:0000860!1.39e-11!45;CL:0002057!6.22e-11!42;CL:0002194!8.02e-11!63;CL:0000576!8.02e-11!63;CL:0000040!8.02e-11!63;CL:0000559!8.02e-11!63;CL:0000839!9.59e-11!70;CL:0000037!1.00e-10!172;CL:0000566!1.00e-10!172;CL:0002032!2.37e-10!165;CL:0000837!2.37e-10!165;CL:0002009!4.23e-10!65;CL:0000766!7.44e-10!76;CL:0000557!2.40e-09!71;CL:0000988!5.27e-09!182;CL:0000763!7.18e-08!112;CL:0000049!7.18e-08!112 | |ontology_enrichment_celltype=CL:0002087!6.47e-13!119;CL:0002031!9.41e-12!124;CL:0000738!1.39e-11!140;CL:0000860!1.39e-11!45;CL:0002057!6.22e-11!42;CL:0002194!8.02e-11!63;CL:0000576!8.02e-11!63;CL:0000040!8.02e-11!63;CL:0000559!8.02e-11!63;CL:0000839!9.59e-11!70;CL:0000037!1.00e-10!172;CL:0000566!1.00e-10!172;CL:0002032!2.37e-10!165;CL:0000837!2.37e-10!165;CL:0002009!4.23e-10!65;CL:0000766!7.44e-10!76;CL:0000557!2.40e-09!71;CL:0000988!5.27e-09!182;CL:0000763!7.18e-08!112;CL:0000049!7.18e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0002393;9.90e-10;6!CL:0002397;9.90e-10;6!CL:0000576;3.97e-08;48 | |ontology_enrichment_celltype_v019=CL:0002393;9.90e-10;6!CL:0002397;9.90e-10;6!CL:0000576;3.97e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.06e-11,115;CL:0002031,2.04e-11,120;CL:0000766,6.22e-11,72;CL:0000738,8.05e-11,136;CL:0002194,9.26e-11,59;CL:0000576,9.26e-11,59;CL:0000040,9.26e-11,59;CL:0000559,9.26e-11,59;CL:0000839,1.21e-10,66;CL:0000860,3.38e-10,42;CL:0002057,3.38e-10,42;CL:0002009,3.54e-10,61;CL:0000557,2.09e-09,67;CL:0002032,5.22e-09,161;CL:0000837,5.22e-09,161;CL:0000037,9.90e-09,168;CL:0002393,2.79e-08,9;CL:0002397,2.79e-08,9;CL:0000988,3.09e-08,177;CL:0000473,3.11e-08,48;CL:0000234,3.11e-08,48;CL:0000763,5.12e-07,108;CL:0000049,5.12e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-08;42 | |ontology_enrichment_development_v019=CL:0002057;2.66e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.00e-10!112;UBERON:0002390!1.53e-09!102;UBERON:0003061!1.53e-09!102;UBERON:0007023!2.13e-08!115;UBERON:0001049!1.61e-07!57;UBERON:0005068!1.61e-07!57;UBERON:0006241!1.61e-07!57;UBERON:0007135!1.61e-07!57;UBERON:0002371!6.21e-07!80 | |ontology_enrichment_uberon=UBERON:0002193!1.00e-10!112;UBERON:0002390!1.53e-09!102;UBERON:0003061!1.53e-09!102;UBERON:0007023!2.13e-08!115;UBERON:0001049!1.61e-07!57;UBERON:0005068!1.61e-07!57;UBERON:0006241!1.61e-07!57;UBERON:0007135!1.61e-07!57;UBERON:0002371!6.21e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.35e-11,56;UBERON:0005068,8.35e-11,56;UBERON:0006241,8.35e-11,56;UBERON:0007135,8.35e-11,56;UBERON:0002390,3.87e-10,98;UBERON:0003061,3.87e-10,98;UBERON:0002193,1.12e-09,108;UBERON:0000073,1.16e-09,53;UBERON:0002616,1.16e-09,53;UBERON:0002371,3.93e-08,76;UBERON:0002780,5.63e-08,41;UBERON:0001890,5.63e-08,41;UBERON:0003080,5.63e-08,41;UBERON:0006240,5.63e-08,41;UBERON:0003528,3.37e-07,34;UBERON:0002020,3.37e-07,34;UBERON:0001474,4.90e-07,82;UBERON:0001893,5.10e-07,34 | |||
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| ||
|short_description=p@chr10:28820520..28820523,- | |short_description=p@chr10:28820520..28820523,- | ||
}} | }} |
Latest revision as of 12:59, 23 July 2015
Short description: | p@chr10:28820520..28820523, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:28820520..28820523, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.06e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.04e-11 | 120 |
myeloid leukocyte | 6.22e-11 | 72 |
leukocyte | 8.05e-11 | 136 |
monopoietic cell | 9.26e-11 | 59 |
monocyte | 9.26e-11 | 59 |
monoblast | 9.26e-11 | 59 |
promonocyte | 9.26e-11 | 59 |
myeloid lineage restricted progenitor cell | 1.21e-10 | 66 |
classical monocyte | 3.38e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.38e-10 | 42 |
macrophage dendritic cell progenitor | 3.54e-10 | 61 |
granulocyte monocyte progenitor cell | 2.09e-09 | 67 |
hematopoietic oligopotent progenitor cell | 5.22e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.22e-09 | 161 |
hematopoietic stem cell | 9.90e-09 | 168 |
intermediate monocyte | 2.79e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.79e-08 | 9 |
hematopoietic cell | 3.09e-08 | 177 |
defensive cell | 3.11e-08 | 48 |
phagocyte | 3.11e-08 | 48 |
myeloid cell | 5.12e-07 | 108 |
common myeloid progenitor | 5.12e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
neural tube | 8.35e-11 | 56 |
neural rod | 8.35e-11 | 56 |
future spinal cord | 8.35e-11 | 56 |
neural keel | 8.35e-11 | 56 |
hematopoietic system | 3.87e-10 | 98 |
blood island | 3.87e-10 | 98 |
hemolymphoid system | 1.12e-09 | 108 |
regional part of nervous system | 1.16e-09 | 53 |
regional part of brain | 1.16e-09 | 53 |
bone marrow | 3.93e-08 | 76 |
regional part of forebrain | 5.63e-08 | 41 |
forebrain | 5.63e-08 | 41 |
anterior neural tube | 5.63e-08 | 41 |
future forebrain | 5.63e-08 | 41 |
brain grey matter | 3.37e-07 | 34 |
gray matter | 3.37e-07 | 34 |
bone element | 4.90e-07 | 82 |
telencephalon | 5.10e-07 | 34 |