FFCP PHASE1:Hg19::chr10:82227975..82228006,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:82227975..82228006,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_at_chr10:82227975..82228006,+ | |description=CAGE_peak_at_chr10:82227975..82228006,+ | ||
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|ontology_enrichment_celltype=CL:0000084!9.12e-18!25;CL:0000827!9.12e-18!25;CL:0000791!6.20e-17!18;CL:0000789!6.20e-17!18;CL:0002420!6.20e-17!18;CL:0002419!6.20e-17!18;CL:0000790!6.20e-17!18;CL:0000738!6.81e-15!140;CL:0000037!9.53e-15!172;CL:0000566!9.53e-15!172;CL:0002087!1.30e-14!119;CL:0002032!4.06e-14!165;CL:0000837!4.06e-14!165;CL:0000988!3.59e-13!182;CL:0002031!5.95e-13!124;CL:0000625!1.25e-12!11;CL:0000542!6.26e-12!53;CL:0000051!6.26e-12!53;CL:0000838!1.73e-11!52;CL:0000624!2.36e-07!6;CL:0002393!6.31e-07!9;CL:0002397!6.31e-07!9 | |ontology_enrichment_celltype=CL:0000084!9.12e-18!25;CL:0000827!9.12e-18!25;CL:0000791!6.20e-17!18;CL:0000789!6.20e-17!18;CL:0002420!6.20e-17!18;CL:0002419!6.20e-17!18;CL:0000790!6.20e-17!18;CL:0000738!6.81e-15!140;CL:0000037!9.53e-15!172;CL:0000566!9.53e-15!172;CL:0002087!1.30e-14!119;CL:0002032!4.06e-14!165;CL:0000837!4.06e-14!165;CL:0000988!3.59e-13!182;CL:0002031!5.95e-13!124;CL:0000625!1.25e-12!11;CL:0000542!6.26e-12!53;CL:0000051!6.26e-12!53;CL:0000838!1.73e-11!52;CL:0000624!2.36e-07!6;CL:0002393!6.31e-07!9;CL:0002397!6.31e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.18e-49;18!CL:0000789;3.18e-49;18!CL:0002419;3.18e-49;18!CL:0000084;6.11e-48;25!CL:0000625;4.17e-35;11!CL:0000624;7.74e-19;6!CL:0000542;6.53e-15;53!CL:0000226;3.50e-10;3!CL:0000842;3.50e-10;3!CL:0000898;4.50e-10;3!CL:0000623;1.86e-09;3!CL:0000815;1.77e-07;2!CL:0000792;1.77e-07;2!CL:0002677;1.77e-07;2 | |ontology_enrichment_celltype_v019=CL:0000791;3.18e-49;18!CL:0000789;3.18e-49;18!CL:0002419;3.18e-49;18!CL:0000084;6.11e-48;25!CL:0000625;4.17e-35;11!CL:0000624;7.74e-19;6!CL:0000542;6.53e-15;53!CL:0000226;3.50e-10;3!CL:0000842;3.50e-10;3!CL:0000898;4.50e-10;3!CL:0000623;1.86e-09;3!CL:0000815;1.77e-07;2!CL:0000792;1.77e-07;2!CL:0002677;1.77e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.94e-49,18;CL:0000789,1.94e-49,18;CL:0002420,1.94e-49,18;CL:0002419,1.94e-49,18;CL:0000790,1.94e-49,18;CL:0000084,3.94e-48,25;CL:0000827,3.94e-48,25;CL:0000625,4.37e-35,11;CL:0000838,2.40e-27,52;CL:0000542,1.03e-26,53;CL:0000051,1.03e-26,53;CL:0000624,4.42e-19,6;CL:0002087,5.17e-17,115;CL:0000738,2.09e-14,136;CL:0002031,1.80e-13,120;CL:0000037,5.00e-12,168;CL:0000988,5.15e-11,177;CL:0000898,3.00e-10,3;CL:0000226,3.74e-10,3;CL:0000842,3.74e-10,3;CL:0002032,5.62e-10,161;CL:0000837,5.62e-10,161;CL:0000623,7.21e-10,3;CL:0000825,7.21e-10,3;CL:0000815,1.61e-07,2;CL:0000792,1.61e-07,2;CL:0002677,1.61e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.18e-49;18!CL:0000051;6.53e-15;53 | |ontology_enrichment_development_v019=CL:0000790;3.18e-49;18!CL:0000051;6.53e-15;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.90e-11!115;UBERON:0002193!6.56e-11!112;UBERON:0002390!2.29e-08!102;UBERON:0003061!2.29e-08!102;UBERON:0000178!2.23e-07!15;UBERON:0000179!2.23e-07!15;UBERON:0000463!2.23e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.90e-11!115;UBERON:0002193!6.56e-11!112;UBERON:0002390!2.29e-08!102;UBERON:0003061!2.29e-08!102;UBERON:0000178!2.23e-07!15;UBERON:0000179!2.23e-07!15;UBERON:0000463!2.23e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.27e-19;15!UBERON:0000179;5.27e-19;15!UBERON:0000463;5.27e-19;15!UBERON:0002390;1.42e-12;32!UBERON:0002193;2.75e-09;42!UBERON:0002370;5.16e-08;2!UBERON:0005058;5.16e-08;2!UBERON:0009113;5.16e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.27e-19;15!UBERON:0000179;5.27e-19;15!UBERON:0000463;5.27e-19;15!UBERON:0002390;1.42e-12;32!UBERON:0002193;2.75e-09;42!UBERON:0002370;5.16e-08;2!UBERON:0005058;5.16e-08;2!UBERON:0009113;5.16e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.15e-19,15;UBERON:0000179,3.15e-19,15;UBERON:0000463,3.15e-19,15;UBERON:0002370,3.92e-08,4;UBERON:0005058,3.92e-08,4;UBERON:0009113,3.92e-08,4;UBERON:0003295,3.92e-08,4;UBERON:0005562,3.92e-08,4;UBERON:0004177,1.37e-07,7;UBERON:0005057,1.37e-07,7;UBERON:0002193,2.11e-07,108 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0.232401601740905,0.284338464974843,0,1.66198622559563,0.802177789880567,1.08505435357926,0.671746422719773,0.971680998056939,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,1.03423704220986,0,0,0.376484679085209,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.870627715885752,0,0.622822248995575,0.251248665256743,1.0429658368404,0,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0.855038231223746,0.59675003159727,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0.263384084775077,2.16380747125216,3.93010762749165,2.46721798799411,0.668745981562712,7.82213439920617,4.73447805734733,1.94826728407911,1.00269411196656,1.47302953737419,0.664601683750863,1.89562704635511,0.768547918354051,0.260118695119756,1.15106533222573,1.10540007114339,1.73881851441031,8.89719378972362,9.63146981122967,9.40819714244791,0.679856056185397,1.91610246800961,4.81078423675682,2.02415753615602,4.45991580053735,6.51083453856419,5.70271226669025,4.36667845325541,7.29523683580185,6.24653632761729,2.60454977248419,3.28451198768419,2.01606743224732,1.60464117470104,5.21367853978076,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.870648686496336,0.132957960518865,0.238490624305342,0,0,0.79504962946682,0,0,0,0.419499436209906,0,0,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0,0.367663080345869,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.463721619900307,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.792435906119034,0.414656231081544,2.16179930125442,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.94064817373566,1.92514554419623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0,2.06768026122887,3.01999881146064,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0.308061348417659,0,0,0.633309773357254,2.27466768141793,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,1.52234282769651,0,2.84823593587081,1.42939065274673,3.70226045777575,1.94541993357815,0.540031437238115,2.37937552888281,0,0,0,0.371606350251437,0.144269212976445,0,0.159426272728822,0.59873811429845,0.191505370132367,0.846694330895531,0,1.12318871245384,0.684704037099577,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0,0,0,0.586032717087576,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,1.44999915086959,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,2.04386596391473,0.470940769185074,0.166211681900156,0,0,0,0,1.11255605286265,0.210998064528027,0,0,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0,0.471807930864739,0,0,0.547364367646998,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0,3.94331031418972,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0,0,0,0.0607495566580247,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.640724475406168,0.78602152549833,0.828478110694391,4.96166021811951,0.197611631897944,0,0,0,0,0,0.327872630709804,0,0,0,0,0.573409195690071,0.443716206147409,0.496771223531068,0,0,0.303298235083296,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,2.39984875025916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94634094001504,0,0,0,0,0,0.319267718114302,0.205116364240755,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,1.09651553371436,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.394636641377094,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| ||
|short_description=p@chr10:82227975..82228006,+ | |short_description=p@chr10:82227975..82228006,+ | ||
}} | }} |
Latest revision as of 16:09, 23 July 2015
Short description: | p@chr10:82227975..82228006, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:82227975..82228006, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.94e-49 | 18 |
alpha-beta T cell | 1.94e-49 | 18 |
immature T cell | 1.94e-49 | 18 |
mature T cell | 1.94e-49 | 18 |
immature alpha-beta T cell | 1.94e-49 | 18 |
T cell | 3.94e-48 | 25 |
pro-T cell | 3.94e-48 | 25 |
CD8-positive, alpha-beta T cell | 4.37e-35 | 11 |
lymphoid lineage restricted progenitor cell | 2.40e-27 | 52 |
lymphocyte | 1.03e-26 | 53 |
common lymphoid progenitor | 1.03e-26 | 53 |
CD4-positive, alpha-beta T cell | 4.42e-19 | 6 |
nongranular leukocyte | 5.17e-17 | 115 |
leukocyte | 2.09e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 1.80e-13 | 120 |
hematopoietic stem cell | 5.00e-12 | 168 |
hematopoietic cell | 5.15e-11 | 177 |
naive T cell | 3.00e-10 | 3 |
single nucleate cell | 3.74e-10 | 3 |
mononuclear cell | 3.74e-10 | 3 |
hematopoietic oligopotent progenitor cell | 5.62e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.62e-10 | 161 |
natural killer cell | 7.21e-10 | 3 |
pro-NK cell | 7.21e-10 | 3 |
regulatory T cell | 1.61e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.61e-07 | 2 |
naive regulatory T cell | 1.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.15e-19 | 15 |
haemolymphatic fluid | 3.15e-19 | 15 |
organism substance | 3.15e-19 | 15 |
thymus | 3.92e-08 | 4 |
hemolymphoid system gland | 3.92e-08 | 4 |
thymic region | 3.92e-08 | 4 |
pharyngeal gland | 3.92e-08 | 4 |
thymus primordium | 3.92e-08 | 4 |
hemopoietic organ | 1.37e-07 | 7 |
immune organ | 1.37e-07 | 7 |
hemolymphoid system | 2.11e-07 | 108 |