FFCP PHASE1:Hg19::chr10:92923714..92923731,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:92923714..92923731,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr10:92923714..92923731,- | |description=CAGE_peak_at_chr10:92923714..92923731,- | ||
|id=chr10:92923714..92923731,- | |id=chr10:92923714..92923731,- | ||
|ontology_enrichment_celltype=CL:0002393;7.13e-23;6!CL:0002397;7.13e-23;6!CL:0000767;3.64e-17;3!CL:0000623;3.10e-16;3!CL:0000576;5.42e-13;48!CL:0001014;2.34e-12;2!CL:0001016;2.34e-12;2!CL:0000766;4.71e-12;69!CL:0000860;1.88e-10;33!CL:0002057;1.88e-10;33!CL:0000097;3.41e-10;5!CL:0000473;2.83e-08;39!CL:0000234;2.83e-08;39!CL:0000226;6.94e-08;3!CL:0000842;6.94e-08;3!CL:0000763;2.23e-07;100!CL:0002087;3.10e-07;104!CL:0000738;4.25e-07;136 | |ontology_enrichment_celltype=CL:0002057!1.84e-38!42;CL:0000860!1.34e-36!45;CL:0000557!4.77e-28!71;CL:0000738!3.93e-27!140;CL:0000766!3.42e-25!76;CL:0002009!4.56e-25!65;CL:0000839!1.02e-23!70;CL:0002031!2.08e-23!124;CL:0002194!6.49e-23!63;CL:0000576!6.49e-23!63;CL:0000040!6.49e-23!63;CL:0000559!6.49e-23!63;CL:0002087!1.46e-22!119;CL:0000037!1.15e-19!172;CL:0000566!1.15e-19!172;CL:0000988!2.26e-17!182;CL:0002320!2.95e-17!365;CL:0000134!4.71e-17!358;CL:0002032!6.57e-17!165;CL:0000837!6.57e-17!165;CL:0000763!5.99e-16!112;CL:0000049!5.99e-16!112;CL:0000219!2.74e-13!390;CL:0000048!6.13e-13!430;CL:0000723!2.59e-12!436;CL:0000034!4.36e-12!444;CL:0002393!2.08e-09!9;CL:0002397!2.08e-09!9;CL:0000063!1.30e-07!578 | ||
| | |ontology_enrichment_celltype_v019=CL:0002393;7.13e-23;6!CL:0002397;7.13e-23;6!CL:0000767;3.64e-17;3!CL:0000623;3.10e-16;3!CL:0000576;5.42e-13;48!CL:0001014;2.34e-12;2!CL:0001016;2.34e-12;2!CL:0000766;4.71e-12;69!CL:0000860;1.88e-10;33!CL:0002057;1.88e-10;33!CL:0000097;3.41e-10;5!CL:0000473;2.83e-08;39!CL:0000234;2.83e-08;39!CL:0000226;6.94e-08;3!CL:0000842;6.94e-08;3!CL:0000763;2.23e-07;100!CL:0002087;3.10e-07;104!CL:0000738;4.25e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.90e-31,136;CL:0000557,5.68e-27,67;CL:0000037,5.20e-26,168;CL:0000766,6.64e-25,72;CL:0000988,2.27e-24,177;CL:0002031,3.39e-22,120;CL:0002032,7.85e-22,161;CL:0000837,7.85e-22,161;CL:0000860,8.23e-22,42;CL:0002057,8.23e-22,42;CL:0000763,5.27e-21,108;CL:0000049,5.27e-21,108;CL:0000839,3.36e-19,66;CL:0000473,1.03e-18,48;CL:0000234,1.03e-18,48;CL:0002009,1.38e-18,61;CL:0000767,1.96e-17,3;CL:0002087,3.27e-17,115;CL:0000623,7.62e-17,3;CL:0000825,7.62e-17,3;CL:0002393,2.49e-15,9;CL:0002397,2.49e-15,9;CL:0002194,2.22e-14,59;CL:0000576,2.22e-14,59;CL:0000040,2.22e-14,59;CL:0000559,2.22e-14,59;CL:0000134,7.86e-14,354;CL:0002320,1.98e-13,361;CL:0001014,2.29e-12,2;CL:0001016,2.29e-12,2;CL:0000219,5.18e-12,386;CL:0000034,1.22e-10,441;CL:0000097,2.62e-10,5;CL:0002028,2.62e-10,5;CL:0000048,2.82e-10,427;CL:0000723,4.90e-10,433;CL:0000226,9.52e-08,3;CL:0000842,9.52e-08,3;CL:0000094,8.22e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.14e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.98e-28!80;UBERON:0001474!9.26e-28!86;UBERON:0002390!3.11e-25!102;UBERON:0003061!3.11e-25!102;UBERON:0004765!3.98e-23!101;UBERON:0001434!3.98e-23!101;UBERON:0002193!2.50e-21!112;UBERON:0002405!6.05e-20!115;UBERON:0002384!5.23e-17!375;UBERON:0002204!2.42e-12!167;UBERON:0003081!4.55e-11!216;UBERON:0000926!3.83e-07!448;UBERON:0004120!3.83e-07!448;UBERON:0006603!3.83e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.28e-23,82;UBERON:0002371,2.68e-23,76;UBERON:0002390,3.91e-21,98;UBERON:0003061,3.91e-21,98;UBERON:0004765,3.92e-21,90;UBERON:0002193,9.47e-19,108;UBERON:0001434,1.40e-18,100;UBERON:0002405,2.79e-18,93;UBERON:0002384,7.01e-13,371;UBERON:0002204,2.37e-09,167;UBERON:0003081,8.21e-08,203 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,5.90046415273356,1.91914699048606,5.10893206943051,0,0,0,0.0774672005803016,0,0.293600439334847,15.5118714388926,6.01633342410425,9.98250005292918,0,0,0,0.145398238779565,0,0,0.929716147622738,0.411167888021826,0.929119112685311,0.863077176966451,0.512321413058201,1.18241114944293,2.06847408441971,0.645484683583826,1.35426486594342,0.564727018627814,0.272906150057846,0.449446968890169,0.918251677112708,0.962787081228281,0.639337125799041,0.329851300186716,0.398927315243264,0.852449501065388,2.32167390902867,0.56738522469114,1.24564449799115,1.50749199154046,1.0429658368404,0.868755378820466,1.21079900526674,0,0.632924774881769,1.47878700418359,1.91343869968539,0.628975936525128,1.34794357375794,0.901061357049038,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,1.68152568894461,0,0.590129310341499,0.786021525498329,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,2.01606743224732,1.60464117470104,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.14398982156026,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,3.10992173311158,1.72943944100354,1.38866676769018,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.57624608161542,1.94064817373566,1.79680250791648,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.03384013061444,1.50999940573032,0.853820462427555,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.581051892299796,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0.160317640503067,0.213452994739353,0,0.288180834308212,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,3.82455615637551,8.51182150013745,0,0,0,0,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,1.63205341010842,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16856654923612,0,0.947015026375446,0.251567901752575,0,0.457680136793847,0.756154618816195,0.310874401165561,0.147855149989634,0.159296767163702,0,0,2.48823724704513,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0.909243296012797,0.644463342254931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0.19998739585493,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,5.90046415273356,1.91914699048606,5.10893206943051,0,0,0,0.0774672005803016,0,0.293600439334847,15.5118714388926,6.01633342410425,9.98250005292918,0,0,0,0.145398238779565,0,0,0.929716147622738,0.411167888021826,0.929119112685311,0.863077176966451,0.512321413058201,1.18241114944293,2.06847408441971,0.645484683583826,1.35426486594342,0.564727018627814,0.272906150057846,0.449446968890169,0.918251677112708,0.962787081228281,0.639337125799041,0.329851300186716,0.398927315243264,0.852449501065388,2.32167390902867,0.56738522469114,1.24564449799115,1.50749199154046,1.0429658368404,0.868755378820466,1.21079900526674,0,0.632924774881769,1.47878700418359,1.91343869968539,0.628975936525128,1.34794357375794,0.901061357049038,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,1.68152568894461,0,0.590129310341499,0.786021525498329,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,2.01606743224732,1.60464117470104,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.14398982156026,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,3.10992173311158,1.72943944100354,1.38866676769018,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.57624608161542,1.94064817373566,1.79680250791648,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,1.03384013061444,1.50999940573032,0.853820462427555,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.581051892299796,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.286822704408103,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0.160317640503067,0.213452994739353,0,0.288180834308212,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,3.82455615637551,8.51182150013745,0,0,0,0,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,1.63205341010842,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16856654923612,0,0.947015026375446,0.251567901752575,0,0.457680136793847,0.756154618816195,0.310874401165561,0.147855149989634,0.159296767163702,0,0,2.48823724704513,0.265841714557995,0,0,0.380805212168795,0.406870733204662,0.909243296012797,0.644463342254931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0.19998739585493,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr10:92923714..92923731,- | |short_description=p@chr10:92923714..92923731,- | ||
}} | }} |
Latest revision as of 16:44, 23 July 2015
Short description: | p@chr10:92923714..92923731, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:92923714..92923731, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 1.28e-23 | 82 |
bone marrow | 2.68e-23 | 76 |
hematopoietic system | 3.91e-21 | 98 |
blood island | 3.91e-21 | 98 |
skeletal element | 3.92e-21 | 90 |
hemolymphoid system | 9.47e-19 | 108 |
skeletal system | 1.40e-18 | 100 |
immune system | 2.79e-18 | 93 |
connective tissue | 7.01e-13 | 371 |
musculoskeletal system | 2.37e-09 | 167 |
lateral plate mesoderm | 8.21e-08 | 203 |