FFCP PHASE1:Hg19::chr11:130014534..130014545,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:130014534..130014545,+ | |||
|coexpression_cluster_id=C3116 | |||
|description=CAGE_peak_at_chr11:130014534..130014545,+ | |description=CAGE_peak_at_chr11:130014534..130014545,+ | ||
|id=chr11:130014534..130014545,+ | |id=chr11:130014534..130014545,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.51e-08;33!CL:0002057;1.51e-08;33!CL:0000473;2.09e-08;39!CL:0000234;2.09e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.55e-09,48;CL:0000234,2.55e-09,48;CL:0000860,2.45e-08,42;CL:0002057,2.45e-08,42;CL:0002194,4.30e-07,59;CL:0000576,4.30e-07,59;CL:0000040,4.30e-07,59;CL:0000559,4.30e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-07;42 | |||
|ontology_enrichment_disease=DOID:0050687!7.46e-07!143 | |ontology_enrichment_disease=DOID:0050687!7.46e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.16e-09!57;UBERON:0005068!2.16e-09!57;UBERON:0006241!2.16e-09!57;UBERON:0007135!2.16e-09!57;UBERON:0000062!8.53e-09!511;UBERON:0007023!1.89e-08!115;UBERON:0000922!7.74e-08!612;UBERON:0002616!8.23e-08!59;UBERON:0000468!1.62e-07!659;UBERON:0002780!4.97e-07!41;UBERON:0001890!4.97e-07!41;UBERON:0006240!4.97e-07!41;UBERON:0000467!5.18e-07!625;UBERON:0002050!7.36e-07!605;UBERON:0005423!7.36e-07!605;UBERON:0000480!7.48e-07!626;UBERON:0001017!9.86e-07!82 | |ontology_enrichment_uberon=UBERON:0001049!2.16e-09!57;UBERON:0005068!2.16e-09!57;UBERON:0006241!2.16e-09!57;UBERON:0007135!2.16e-09!57;UBERON:0000062!8.53e-09!511;UBERON:0007023!1.89e-08!115;UBERON:0000922!7.74e-08!612;UBERON:0002616!8.23e-08!59;UBERON:0000468!1.62e-07!659;UBERON:0002780!4.97e-07!41;UBERON:0001890!4.97e-07!41;UBERON:0006240!4.97e-07!41;UBERON:0000467!5.18e-07!625;UBERON:0002050!7.36e-07!605;UBERON:0005423!7.36e-07!605;UBERON:0000480!7.48e-07!626;UBERON:0001017!9.86e-07!82 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.58e-13,56;UBERON:0005068,3.58e-13,56;UBERON:0006241,3.58e-13,56;UBERON:0007135,3.58e-13,56;UBERON:0000073,6.14e-11,53;UBERON:0002616,6.14e-11,53;UBERON:0003075,4.00e-10,82;UBERON:0007284,4.00e-10,82;UBERON:0001017,1.31e-09,81;UBERON:0002346,3.08e-09,86;UBERON:0007023,1.08e-08,114;UBERON:0001016,1.83e-08,89;UBERON:0000955,1.19e-07,68;UBERON:0006238,1.19e-07,68;UBERON:0002780,1.19e-07,41;UBERON:0001890,1.19e-07,41;UBERON:0003080,1.19e-07,41;UBERON:0006240,1.19e-07,41;UBERON:0010314,1.35e-07,132;UBERON:0003076,1.39e-07,15;UBERON:0003057,1.39e-07,15;UBERON:0003528,1.91e-07,34;UBERON:0002020,1.91e-07,34;UBERON:0000025,4.20e-07,192 | |||
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0.320568492303233 | ||
|short_description=p@chr11:130014534..130014545,+ | |short_description=p@chr11:130014534..130014545,+ | ||
}} | }} |
Latest revision as of 20:00, 23 July 2015
Short description: | p@chr11:130014534..130014545, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:130014534..130014545, + |
Coexpression cluster: | C3116_pineal_Monocytederived_thyroid_colon_Cardiac_large_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.55e-09 | 48 |
phagocyte | 2.55e-09 | 48 |
classical monocyte | 2.45e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-08 | 42 |
monopoietic cell | 4.30e-07 | 59 |
monocyte | 4.30e-07 | 59 |
monoblast | 4.30e-07 | 59 |
promonocyte | 4.30e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.58e-13 | 56 |
neural rod | 3.58e-13 | 56 |
future spinal cord | 3.58e-13 | 56 |
neural keel | 3.58e-13 | 56 |
regional part of nervous system | 6.14e-11 | 53 |
regional part of brain | 6.14e-11 | 53 |
neural plate | 4.00e-10 | 82 |
presumptive neural plate | 4.00e-10 | 82 |
central nervous system | 1.31e-09 | 81 |
neurectoderm | 3.08e-09 | 86 |
adult organism | 1.08e-08 | 114 |
nervous system | 1.83e-08 | 89 |
brain | 1.19e-07 | 68 |
future brain | 1.19e-07 | 68 |
regional part of forebrain | 1.19e-07 | 41 |
forebrain | 1.19e-07 | 41 |
anterior neural tube | 1.19e-07 | 41 |
future forebrain | 1.19e-07 | 41 |
structure with developmental contribution from neural crest | 1.35e-07 | 132 |
posterior neural tube | 1.39e-07 | 15 |
chordal neural plate | 1.39e-07 | 15 |
brain grey matter | 1.91e-07 | 34 |
gray matter | 1.91e-07 | 34 |
tube | 4.20e-07 | 192 |