FFCP PHASE1:Hg19::chr11:17784935..17784940,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:17784935..17784940,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr11:17784935..17784940,+ | |||
|id=chr11:17784935..17784940,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.79e-88;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.28e-57!57;UBERON:0005068!3.28e-57!57;UBERON:0006241!3.28e-57!57;UBERON:0007135!3.28e-57!57;UBERON:0002616!3.42e-55!59;UBERON:0000955!7.95e-51!69;UBERON:0006238!7.95e-51!69;UBERON:0001893!1.90e-48!34;UBERON:0001017!1.07e-46!82;UBERON:0002780!9.54e-46!41;UBERON:0001890!9.54e-46!41;UBERON:0006240!9.54e-46!41;UBERON:0001869!7.10e-45!32;UBERON:0003080!1.28e-44!42;UBERON:0005743!2.05e-44!86;UBERON:0000073!8.95e-44!94;UBERON:0001016!8.95e-44!94;UBERON:0002791!1.80e-43!33;UBERON:0002020!2.85e-42!34;UBERON:0003528!2.85e-42!34;UBERON:0002619!2.78e-40!22;UBERON:0003075!5.14e-37!86;UBERON:0007284!5.14e-37!86;UBERON:0001950!1.84e-36!20;UBERON:0000956!1.96e-35!25;UBERON:0000203!1.96e-35!25;UBERON:0002346!3.08e-35!90;UBERON:0003056!4.29e-30!61;UBERON:0007023!4.79e-30!115;UBERON:0000033!2.34e-27!123;UBERON:0000153!6.10e-26!129;UBERON:0007811!6.10e-26!129;UBERON:0004121!4.20e-23!169;UBERON:0000924!1.71e-22!173;UBERON:0006601!1.71e-22!173;UBERON:0004733!1.15e-16!12;UBERON:0002028!1.15e-16!12;UBERON:0007277!1.15e-16!12;UBERON:0000025!2.88e-16!194;UBERON:0002021!2.05e-15!5;UBERON:0004732!2.25e-15!13;UBERON:0002680!9.73e-15!9;UBERON:0001895!9.73e-15!9;UBERON:0010092!9.73e-15!9;UBERON:0003076!2.62e-13!15;UBERON:0003057!2.62e-13!15;UBERON:0000200!1.36e-12!6;UBERON:0004111!2.21e-12!241;UBERON:0002771!8.36e-12!3;UBERON:0000988!1.68e-11!3;UBERON:0000064!4.21e-11!219;UBERON:0000477!7.61e-10!286;UBERON:0001871!1.34e-09!7;UBERON:0001874!1.99e-09!1;UBERON:0002902!2.16e-09!1;UBERON:0009899!2.16e-09!1;UBERON:0002298!2.27e-09!8;UBERON:0001882!2.55e-09!1;UBERON:0005403!2.55e-09!1;UBERON:0007190!4.15e-09!1;UBERON:0002336!4.50e-09!1;UBERON:0001018!4.50e-09!1;UBERON:0002473!4.50e-09!1;UBERON:0005340!4.50e-09!1;UBERON:0002316!4.50e-09!1;UBERON:0003544!4.50e-09!1;UBERON:0001020!4.50e-09!1;UBERON:0005970!4.50e-09!1;UBERON:0002437!4.50e-09!1;UBERON:0002022!5.72e-09!1;UBERON:0000369!5.74e-09!4;UBERON:0002435!5.74e-09!4;UBERON:0000204!5.74e-09!4;UBERON:0010082!5.74e-09!4;UBERON:0000483!7.89e-09!309;UBERON:0000119!1.04e-08!312;UBERON:0002308!1.42e-08!9;UBERON:0000125!1.42e-08!9;UBERON:0000475!9.01e-08!365;UBERON:0001872!2.01e-07!5;UBERON:0000349!2.07e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.09e-44;6!UBERON:0002680;2.87e-30;9!UBERON:0001895;2.87e-30;9!UBERON:0004733;4.86e-23;12!UBERON:0002028;4.86e-23;12!UBERON:0004732;2.28e-21;13!UBERON:0002021;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.76e-45,6;UBERON:0006215,9.76e-45,6;UBERON:0002680,2.66e-30,9;UBERON:0001895,2.66e-30,9;UBERON:0010092,2.66e-30,9;UBERON:0004733,4.59e-23,12;UBERON:0002028,4.59e-23,12;UBERON:0007277,4.59e-23,12;UBERON:0004732,2.16e-21,13;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15;UBERON:0002021,1.83e-14,5;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p@chr11:17784935..17784940,+ | |||
}} | }} |
Latest revision as of 20:32, 23 July 2015
Short description: | p@chr11:17784935..17784940, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:17784935..17784940, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.76e-45 | 6 |
rhombic lip | 9.76e-45 | 6 |
regional part of metencephalon | 2.66e-30 | 9 |
metencephalon | 2.66e-30 | 9 |
future metencephalon | 2.66e-30 | 9 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |
occipital lobe | 1.83e-14 | 5 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |