FFCP PHASE1:Hg19::chr11:9286221..9286230,+: Difference between revisions
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|id=chr11:9286221..9286230,+
|short_description=p@chr11:9286221..9286230,+
|description=CAGE_peak_at_chr11:9286221..9286230,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:9286221..9286230,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:9286221..9286230,+ | |||
|id=chr11:9286221..9286230,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.35e-75!42;CL:0000860!1.83e-69!45;CL:0000766!6.18e-51!76;CL:0002009!2.43e-47!65;CL:0002194!4.26e-46!63;CL:0000576!4.26e-46!63;CL:0000040!4.26e-46!63;CL:0000559!4.26e-46!63;CL:0000557!1.31e-42!71;CL:0000839!1.20e-40!70;CL:0000763!3.18e-35!112;CL:0000049!3.18e-35!112;CL:0000738!6.50e-33!140;CL:0002087!1.87e-28!119;CL:0000037!4.41e-26!172;CL:0000566!4.41e-26!172;CL:0002031!3.71e-25!124;CL:0002032!1.24e-24!165;CL:0000837!1.24e-24!165;CL:0000988!4.95e-24!182;CL:0002393!2.68e-12!9;CL:0002397!2.68e-12!9;CL:0000134!2.21e-11!358;CL:0002320!6.24e-11!365;CL:0000094!2.86e-10!8;CL:0000219!5.29e-10!390;CL:0000034!1.18e-08!444;CL:0000048!4.39e-08!430;CL:0000771!4.65e-08!2;CL:0000723!8.31e-08!436;CL:0000081!2.39e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.45e-48;33!CL:0002057;2.45e-48;33!CL:0000576;3.83e-32;48!CL:0000473;3.35e-31;39!CL:0000234;3.35e-31;39!CL:0000766;5.54e-24;69!CL:0000771;7.69e-21;2!CL:0002393;1.16e-14;6!CL:0002397;1.16e-14;6!CL:0000763;9.55e-13;100!CL:0002087;2.38e-12;104!CL:0000094;1.28e-11;8!CL:0000081;1.38e-08;11!CL:0000738;2.35e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.12e-62,42;CL:0002057,2.12e-62,42;CL:0000473,2.65e-54,48;CL:0000234,2.65e-54,48;CL:0000766,2.92e-49,72;CL:0002194,5.86e-43,59;CL:0000576,5.86e-43,59;CL:0000040,5.86e-43,59;CL:0000559,5.86e-43,59;CL:0002009,1.71e-41,61;CL:0000839,3.25e-38,66;CL:0000557,1.29e-37,67;CL:0000763,4.07e-32,108;CL:0000049,4.07e-32,108;CL:0000738,5.40e-25,136;CL:0002087,5.34e-21,115;CL:0000771,7.70e-21,2;CL:0002032,1.05e-20,161;CL:0000837,1.05e-20,161;CL:0002031,5.04e-20,120;CL:0000037,9.89e-20,168;CL:0000988,1.37e-18,177;CL:0000094,1.36e-11,8;CL:0002393,5.89e-10,9;CL:0002397,5.89e-10,9;CL:0000081,1.44e-08,11;CL:0000134,7.93e-08,354;CL:0002320,1.29e-07,361;CL:0000219,7.25e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.88e-44;42!UBERON:0005425;1.21e-10;1!CL:0000049;2.39e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.18e-39!80;UBERON:0001474!7.36e-36!86;UBERON:0002390!7.70e-33!102;UBERON:0003061!7.70e-33!102;UBERON:0004765!4.11e-31!101;UBERON:0001434!4.11e-31!101;UBERON:0002193!4.68e-29!112;UBERON:0002405!1.56e-24!115;UBERON:0002204!2.47e-16!167;UBERON:0003081!1.87e-11!216;UBERON:0002384!2.56e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.21e-10;1!UBERON:0001785;1.21e-10;1!UBERON:0002464;1.21e-10;1!UBERON:0004904;1.21e-10;1!UBERON:0001021;1.21e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.28e-33,76;UBERON:0001474,2.29e-30,82;UBERON:0004765,1.79e-27,90;UBERON:0002405,1.62e-26,93;UBERON:0002390,4.77e-25,98;UBERON:0003061,4.77e-25,98;UBERON:0001434,1.68e-24,100;UBERON:0002193,1.63e-22,108;UBERON:0002204,1.11e-13,167;UBERON:0003081,8.74e-11,203;UBERON:0000941,1.61e-10,1;UBERON:0001785,1.61e-10,1;UBERON:0002464,1.61e-10,1;UBERON:0004904,1.61e-10,1;UBERON:0001021,1.61e-10,1;UBERON:0003902,1.61e-10,1;UBERON:0005425,1.61e-10,1;UBERON:0002384,2.52e-07,371 | |||
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| ||
|short_description=p@chr11:9286221..9286230,+ | |||
}} | }} |
Latest revision as of 03:31, 24 July 2015
Short description: | p@chr11:9286221..9286230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:9286221..9286230, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.12e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.12e-62 | 42 |
defensive cell | 2.65e-54 | 48 |
phagocyte | 2.65e-54 | 48 |
myeloid leukocyte | 2.92e-49 | 72 |
monopoietic cell | 5.86e-43 | 59 |
monocyte | 5.86e-43 | 59 |
monoblast | 5.86e-43 | 59 |
promonocyte | 5.86e-43 | 59 |
macrophage dendritic cell progenitor | 1.71e-41 | 61 |
myeloid lineage restricted progenitor cell | 3.25e-38 | 66 |
granulocyte monocyte progenitor cell | 1.29e-37 | 67 |
myeloid cell | 4.07e-32 | 108 |
common myeloid progenitor | 4.07e-32 | 108 |
leukocyte | 5.40e-25 | 136 |
nongranular leukocyte | 5.34e-21 | 115 |
eosinophil | 7.70e-21 | 2 |
hematopoietic oligopotent progenitor cell | 1.05e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 5.04e-20 | 120 |
hematopoietic stem cell | 9.89e-20 | 168 |
hematopoietic cell | 1.37e-18 | 177 |
granulocyte | 1.36e-11 | 8 |
intermediate monocyte | 5.89e-10 | 9 |
CD14-positive, CD16-positive monocyte | 5.89e-10 | 9 |
blood cell | 1.44e-08 | 11 |
mesenchymal cell | 7.93e-08 | 354 |
connective tissue cell | 1.29e-07 | 361 |
motile cell | 7.25e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.28e-33 | 76 |
bone element | 2.29e-30 | 82 |
skeletal element | 1.79e-27 | 90 |
immune system | 1.62e-26 | 93 |
hematopoietic system | 4.77e-25 | 98 |
blood island | 4.77e-25 | 98 |
skeletal system | 1.68e-24 | 100 |
hemolymphoid system | 1.63e-22 | 108 |
musculoskeletal system | 1.11e-13 | 167 |
lateral plate mesoderm | 8.74e-11 | 203 |
cranial nerve II | 1.61e-10 | 1 |
cranial nerve | 1.61e-10 | 1 |
nerve trunk | 1.61e-10 | 1 |
nerve connecting eye with brain | 1.61e-10 | 1 |
nerve | 1.61e-10 | 1 |
retinal neural layer | 1.61e-10 | 1 |
presumptive neural retina | 1.61e-10 | 1 |
connective tissue | 2.52e-07 | 371 |