FFCP PHASE1:Hg19::chr12:47786984..47787003,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:47786984..47787003,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:47786984..47787003,- | |||
|id=chr12:47786984..47787003,- | |||
|ontology_enrichment_celltype=CL:0002057!4.13e-43!42;CL:0000860!1.00e-39!45;CL:0000766!2.53e-34!76;CL:0002009!6.33e-29!65;CL:0002194!7.65e-28!63;CL:0000576!7.65e-28!63;CL:0000040!7.65e-28!63;CL:0000559!7.65e-28!63;CL:0000738!2.67e-26!140;CL:0000557!7.56e-26!71;CL:0000839!2.45e-24!70;CL:0000763!6.41e-22!112;CL:0000049!6.41e-22!112;CL:0000988!3.22e-21!182;CL:0002087!3.48e-21!119;CL:0000037!2.18e-19!172;CL:0000566!2.18e-19!172;CL:0002031!1.25e-18!124;CL:0002032!2.83e-18!165;CL:0000837!2.83e-18!165;CL:0000094!1.48e-12!8;CL:0000034!1.93e-12!444;CL:0000723!3.87e-12!436;CL:0000081!5.83e-12!11;CL:0000048!8.14e-12!430;CL:0000080!2.94e-11!6;CL:0000134!2.34e-09!358;CL:0000767!4.38e-09!3;CL:0002320!6.01e-09!365;CL:0000219!1.63e-07!390;CL:0002371!3.62e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.14e-63;33!CL:0002057;9.14e-63;33!CL:0000473;3.52e-44;39!CL:0000234;3.52e-44;39!CL:0000576;3.27e-37;48!CL:0000766;9.83e-25;69!CL:0002087;2.02e-14;104!CL:0002393;6.60e-14;6!CL:0002397;6.60e-14;6!CL:0000763;2.18e-12;100!CL:0000738;4.66e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.92e-75,42;CL:0002057,3.92e-75,42;CL:0000473,2.07e-65,48;CL:0000234,2.07e-65,48;CL:0002194,8.65e-52,59;CL:0000576,8.65e-52,59;CL:0000040,8.65e-52,59;CL:0000559,8.65e-52,59;CL:0002009,4.96e-50,61;CL:0000766,9.41e-47,72;CL:0000839,4.30e-46,66;CL:0000557,2.25e-45,67;CL:0000763,2.28e-30,108;CL:0000049,2.28e-30,108;CL:0002087,1.98e-25,115;CL:0002031,2.93e-24,120;CL:0000738,1.46e-23,136;CL:0002032,1.84e-19,161;CL:0000837,1.84e-19,161;CL:0000037,1.57e-18,168;CL:0000988,1.93e-17,177;CL:0002393,1.84e-09,9;CL:0002397,1.84e-09,9;CL:0000134,3.75e-07,354;CL:0002320,5.99e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.68e-52;42!UBERON:0005425;3.78e-10;1!CL:0000049;4.12e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.34e-24!102;UBERON:0003061!1.34e-24!102;UBERON:0002371!7.53e-24!80;UBERON:0001474!1.21e-21!86;UBERON:0002193!1.35e-21!112;UBERON:0004765!2.75e-17!101;UBERON:0001434!2.75e-17!101;UBERON:0003081!3.93e-16!216;UBERON:0002204!1.18e-15!167;UBERON:0002405!2.92e-14!115;UBERON:0002384!2.17e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.78e-10;1!UBERON:0001785;3.78e-10;1!UBERON:0002464;3.78e-10;1!UBERON:0004904;3.78e-10;1!UBERON:0001021;3.78e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.52e-40,76;UBERON:0001474,1.13e-36,82;UBERON:0004765,3.35e-33,90;UBERON:0002405,4.73e-32,93;UBERON:0002390,2.73e-30,98;UBERON:0003061,2.73e-30,98;UBERON:0001434,1.24e-29,100;UBERON:0002193,3.01e-27,108;UBERON:0002204,1.20e-16,167;UBERON:0003081,3.54e-13,203;UBERON:0000941,3.61e-10,1;UBERON:0001785,3.61e-10,1;UBERON:0002464,3.61e-10,1;UBERON:0004904,3.61e-10,1;UBERON:0001021,3.61e-10,1;UBERON:0003902,3.61e-10,1;UBERON:0005425,3.61e-10,1;UBERON:0000926,2.14e-07,315;UBERON:0004120,2.14e-07,315;UBERON:0006603,2.14e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0.0774672005803016,0,0,3.32397245119126,1.40381113229099,1.73608696572681,0,0,0,0,0,0,0.929716147622738,0.411167888021826,2.47765096716083,0.863077176966451,1.7931249457037,3.07426898855161,10.6871161028352,8.39130088658974,10.8341189275473,0.188242339542605,0,0,9.48860066349798,4.17207735198922,5.75403413219137,0,0.199463657621632,0,13.6398342155434,7.37600792098482,7.4738669879469,0.75374599577023,1.0429658368404,0.65156653411535,3.63239701580021,13.9945501675275,17.4054313092486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92355994087075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0.73927574994817,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:47786984..47787003,- | |||
}} |
Latest revision as of 08:47, 24 July 2015
Short description: | p@chr12:47786984..47787003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47786984..47787003, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.92e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.92e-75 | 42 |
defensive cell | 2.07e-65 | 48 |
phagocyte | 2.07e-65 | 48 |
monopoietic cell | 8.65e-52 | 59 |
monocyte | 8.65e-52 | 59 |
monoblast | 8.65e-52 | 59 |
promonocyte | 8.65e-52 | 59 |
macrophage dendritic cell progenitor | 4.96e-50 | 61 |
myeloid leukocyte | 9.41e-47 | 72 |
myeloid lineage restricted progenitor cell | 4.30e-46 | 66 |
granulocyte monocyte progenitor cell | 2.25e-45 | 67 |
myeloid cell | 2.28e-30 | 108 |
common myeloid progenitor | 2.28e-30 | 108 |
nongranular leukocyte | 1.98e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 2.93e-24 | 120 |
leukocyte | 1.46e-23 | 136 |
hematopoietic oligopotent progenitor cell | 1.84e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-19 | 161 |
hematopoietic stem cell | 1.57e-18 | 168 |
hematopoietic cell | 1.93e-17 | 177 |
intermediate monocyte | 1.84e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.84e-09 | 9 |
mesenchymal cell | 3.75e-07 | 354 |
connective tissue cell | 5.99e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.52e-40 | 76 |
bone element | 1.13e-36 | 82 |
skeletal element | 3.35e-33 | 90 |
immune system | 4.73e-32 | 93 |
hematopoietic system | 2.73e-30 | 98 |
blood island | 2.73e-30 | 98 |
skeletal system | 1.24e-29 | 100 |
hemolymphoid system | 3.01e-27 | 108 |
musculoskeletal system | 1.20e-16 | 167 |
lateral plate mesoderm | 3.54e-13 | 203 |
cranial nerve II | 3.61e-10 | 1 |
cranial nerve | 3.61e-10 | 1 |
nerve trunk | 3.61e-10 | 1 |
nerve connecting eye with brain | 3.61e-10 | 1 |
nerve | 3.61e-10 | 1 |
retinal neural layer | 3.61e-10 | 1 |
presumptive neural retina | 3.61e-10 | 1 |
mesoderm | 2.14e-07 | 315 |
mesoderm-derived structure | 2.14e-07 | 315 |
presumptive mesoderm | 2.14e-07 | 315 |