FFCP PHASE1:Hg19::chr12:94167610..94167614,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:94167610..94167614,+ | |||
|description=CAGE_peak_at_chr12:94167610..94167614,+ | |description=CAGE_peak_at_chr12:94167610..94167614,+ | ||
|id=chr12:94167610..94167614,+ | |id=chr12:94167610..94167614,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.19e-42!42;CL:0000860!2.23e-38!45;CL:0002194!7.88e-27!63;CL:0000576!7.88e-27!63;CL:0000040!7.88e-27!63;CL:0000559!7.88e-27!63;CL:0002009!1.50e-25!65;CL:0000766!8.51e-24!76;CL:0000839!1.10e-22!70;CL:0000557!3.65e-22!71;CL:0002087!3.52e-21!119;CL:0000738!6.10e-18!140;CL:0002031!1.12e-16!124;CL:0000763!9.96e-15!112;CL:0000049!9.96e-15!112;CL:0000988!2.89e-14!182;CL:0000037!6.83e-14!172;CL:0000566!6.83e-14!172;CL:0002032!4.86e-13!165;CL:0000837!4.86e-13!165;CL:0002393!2.26e-11!9;CL:0002397!2.26e-11!9;CL:0000080!3.61e-08!6 | |ontology_enrichment_celltype=CL:0002057!3.19e-42!42;CL:0000860!2.23e-38!45;CL:0002194!7.88e-27!63;CL:0000576!7.88e-27!63;CL:0000040!7.88e-27!63;CL:0000559!7.88e-27!63;CL:0002009!1.50e-25!65;CL:0000766!8.51e-24!76;CL:0000839!1.10e-22!70;CL:0000557!3.65e-22!71;CL:0002087!3.52e-21!119;CL:0000738!6.10e-18!140;CL:0002031!1.12e-16!124;CL:0000763!9.96e-15!112;CL:0000049!9.96e-15!112;CL:0000988!2.89e-14!182;CL:0000037!6.83e-14!172;CL:0000566!6.83e-14!172;CL:0002032!4.86e-13!165;CL:0000837!4.86e-13!165;CL:0002393!2.26e-11!9;CL:0002397!2.26e-11!9;CL:0000080!3.61e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.25e-34;33!CL:0002057;3.25e-34;33!CL:0000473;2.97e-27;39!CL:0000234;2.97e-27;39!CL:0000576;1.49e-18;48!CL:0000766;1.37e-13;69!CL:0002087;1.13e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;3.25e-34;33!CL:0002057;3.25e-34;33!CL:0000473;2.97e-27;39!CL:0000234;2.97e-27;39!CL:0000576;1.49e-18;48!CL:0000766;1.37e-13;69!CL:0002087;1.13e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.82e-38,42;CL:0002057,2.82e-38,42;CL:0000473,3.30e-33,48;CL:0000234,3.30e-33,48;CL:0002194,4.19e-26,59;CL:0000576,4.19e-26,59;CL:0000040,4.19e-26,59;CL:0000559,4.19e-26,59;CL:0002009,3.46e-25,61;CL:0000766,2.74e-24,72;CL:0000839,3.92e-23,66;CL:0000557,9.29e-23,67;CL:0000763,8.55e-18,108;CL:0000049,8.55e-18,108;CL:0002087,1.76e-16,115;CL:0002031,1.10e-15,120;CL:0000738,1.79e-15,136;CL:0000988,1.50e-14,177;CL:0002032,1.96e-14,161;CL:0000837,1.96e-14,161;CL:0000037,1.04e-13,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-27;42!UBERON:0005425;6.32e-10;1 | |ontology_enrichment_development_v019=CL:0002057;1.02e-27;42!UBERON:0005425;6.32e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-19!102;UBERON:0003061!1.53e-19!102;UBERON:0002371!4.09e-19!80;UBERON:0002193!3.86e-17!112;UBERON:0001474!8.51e-17!86;UBERON:0004765!7.77e-15!101;UBERON:0001434!7.77e-15!101;UBERON:0002405!1.61e-12!115;UBERON:0002204!6.54e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!1.53e-19!102;UBERON:0003061!1.53e-19!102;UBERON:0002371!4.09e-19!80;UBERON:0002193!3.86e-17!112;UBERON:0001474!8.51e-17!86;UBERON:0004765!7.77e-15!101;UBERON:0001434!7.77e-15!101;UBERON:0002405!1.61e-12!115;UBERON:0002204!6.54e-09!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.32e-10;1!UBERON:0001785;6.32e-10;1!UBERON:0002464;6.32e-10;1!UBERON:0004904;6.32e-10;1!UBERON:0001021;6.32e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0000941;6.32e-10;1!UBERON:0001785;6.32e-10;1!UBERON:0002464;6.32e-10;1!UBERON:0004904;6.32e-10;1!UBERON:0001021;6.32e-10;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.00e-20,76;UBERON:0001474,3.22e-18,82;UBERON:0002390,3.12e-17,98;UBERON:0003061,3.12e-17,98;UBERON:0004765,2.08e-16,90;UBERON:0002405,8.28e-16,93;UBERON:0002193,2.04e-15,108;UBERON:0001434,1.51e-14,100;UBERON:0000941,4.85e-10,1;UBERON:0001785,4.85e-10,1;UBERON:0002464,4.85e-10,1;UBERON:0004904,4.85e-10,1;UBERON:0001021,4.85e-10,1;UBERON:0003902,4.85e-10,1;UBERON:0005425,4.85e-10,1;UBERON:0002204,4.38e-09,167;UBERON:0003081,5.02e-07,203 | |||
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| ||
|short_description=p@chr12:94167610..94167614,+ | |short_description=p@chr12:94167610..94167614,+ | ||
}} | }} |
Latest revision as of 13:42, 24 July 2015
Short description: | p@chr12:94167610..94167614, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:94167610..94167614, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.82e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.82e-38 | 42 |
defensive cell | 3.30e-33 | 48 |
phagocyte | 3.30e-33 | 48 |
monopoietic cell | 4.19e-26 | 59 |
monocyte | 4.19e-26 | 59 |
monoblast | 4.19e-26 | 59 |
promonocyte | 4.19e-26 | 59 |
macrophage dendritic cell progenitor | 3.46e-25 | 61 |
myeloid leukocyte | 2.74e-24 | 72 |
myeloid lineage restricted progenitor cell | 3.92e-23 | 66 |
granulocyte monocyte progenitor cell | 9.29e-23 | 67 |
myeloid cell | 8.55e-18 | 108 |
common myeloid progenitor | 8.55e-18 | 108 |
nongranular leukocyte | 1.76e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.10e-15 | 120 |
leukocyte | 1.79e-15 | 136 |
hematopoietic cell | 1.50e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.96e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-14 | 161 |
hematopoietic stem cell | 1.04e-13 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.00e-20 | 76 |
bone element | 3.22e-18 | 82 |
hematopoietic system | 3.12e-17 | 98 |
blood island | 3.12e-17 | 98 |
skeletal element | 2.08e-16 | 90 |
immune system | 8.28e-16 | 93 |
hemolymphoid system | 2.04e-15 | 108 |
skeletal system | 1.51e-14 | 100 |
cranial nerve II | 4.85e-10 | 1 |
cranial nerve | 4.85e-10 | 1 |
nerve trunk | 4.85e-10 | 1 |
nerve connecting eye with brain | 4.85e-10 | 1 |
nerve | 4.85e-10 | 1 |
retinal neural layer | 4.85e-10 | 1 |
presumptive neural retina | 4.85e-10 | 1 |
musculoskeletal system | 4.38e-09 | 167 |
lateral plate mesoderm | 5.02e-07 | 203 |