FFCP PHASE1:Hg19::chr12:9820699..9820712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:9820699..9820712,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:9820699..9820712,+ | |description=CAGE_peak_at_chr12:9820699..9820712,+ | ||
|id=chr12:9820699..9820712,+ | |id=chr12:9820699..9820712,+ | ||
|ontology_enrichment_celltype=CL:0002031!4.89e-15!124;CL:0002087!5.01e-15!119;CL:0002057!1.14e-13!42;CL:0000738!3.98e-13!140;CL:0000860!2.06e-12!45;CL:0002009!5.10e-11!65;CL:0000557!9.80e-11!71;CL:0000988!1.16e-10!182;CL:0002194!2.32e-10!63;CL:0000576!2.32e-10!63;CL:0000040!2.32e-10!63;CL:0000559!2.32e-10!63;CL:0002032!2.59e-10!165;CL:0000837!2.59e-10!165;CL:0000839!7.18e-10!70;CL:0000037!1.74e-09!172;CL:0000566!1.74e-09!172;CL:0000766!1.20e-08!76 | |ontology_enrichment_celltype=CL:0002031!4.89e-15!124;CL:0002087!5.01e-15!119;CL:0002057!1.14e-13!42;CL:0000738!3.98e-13!140;CL:0000860!2.06e-12!45;CL:0002009!5.10e-11!65;CL:0000557!9.80e-11!71;CL:0000988!1.16e-10!182;CL:0002194!2.32e-10!63;CL:0000576!2.32e-10!63;CL:0000040!2.32e-10!63;CL:0000559!2.32e-10!63;CL:0002032!2.59e-10!165;CL:0000837!2.59e-10!165;CL:0000839!7.18e-10!70;CL:0000037!1.74e-09!172;CL:0000566!1.74e-09!172;CL:0000766!1.20e-08!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.41e-43;33!CL:0002057;2.41e-43;33!CL:0000473;1.27e-29;39!CL:0000234;1.27e-29;39!CL:0000576;2.33e-18;48!CL:0000766;6.05e-13;69!CL:0002087;3.78e-12;104!CL:0000511;2.84e-08;1!CL:0002625;2.84e-08;1!CL:0000216;2.84e-08;1!CL:0002379;2.84e-08;1!CL:0000763;5.80e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.52e-36,42;CL:0002057,2.52e-36,42;CL:0000473,1.99e-31,48;CL:0000234,1.99e-31,48;CL:0000839,8.77e-25,66;CL:0002194,1.44e-24,59;CL:0000576,1.44e-24,59;CL:0000040,1.44e-24,59;CL:0000559,1.44e-24,59;CL:0000557,2.25e-24,67;CL:0002009,1.10e-23,61;CL:0000766,1.71e-22,72;CL:0002087,5.43e-19,115;CL:0002031,5.05e-18,120;CL:0000738,2.16e-17,136;CL:0000988,2.36e-17,177;CL:0002032,4.05e-14,161;CL:0000837,4.05e-14,161;CL:0000763,4.84e-14,108;CL:0000049,4.84e-14,108;CL:0000037,2.25e-13,168;CL:0002379,2.13e-08,1;CL:0000511,2.64e-08,1;CL:0002625,2.64e-08,1;CL:0000216,2.64e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;5.53e-25;42 | |||
|ontology_enrichment_disease=DOID:0060058!8.31e-10!10 | |ontology_enrichment_disease=DOID:0060058!8.31e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.53e-08;1!DOID:0060061;1.53e-08;1!DOID:8691;1.53e-08;1!DOID:12603;1.77e-08;1!DOID:3620;2.84e-08;1!DOID:3565;2.84e-08;1!DOID:0060058;6.47e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.59e-08,1;DOID:0060061,1.59e-08,1;DOID:8691,1.59e-08,1;DOID:12603,1.71e-08,1;DOID:3620,2.13e-08,1;DOID:3565,2.13e-08,1;DOID:0060058,6.75e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.68e-12!102;UBERON:0003061!1.68e-12!102;UBERON:0002193!1.99e-12!112;UBERON:0002371!7.42e-09!80;UBERON:0002405!3.06e-08!115;UBERON:0001474!7.77e-08!86 | |ontology_enrichment_uberon=UBERON:0002390!1.68e-12!102;UBERON:0003061!1.68e-12!102;UBERON:0002193!1.99e-12!112;UBERON:0002371!7.42e-09!80;UBERON:0002405!3.06e-08!115;UBERON:0001474!7.77e-08!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.84e-08;1!UBERON:0001343;2.84e-08;1!UBERON:0004910;2.84e-08;1!UBERON:0004813;2.84e-08;1!UBERON:0002331;7.18e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.26e-23,98;UBERON:0003061,7.26e-23,98;UBERON:0002371,3.65e-21,76;UBERON:0002193,1.96e-20,108;UBERON:0001474,2.07e-19,82;UBERON:0004765,1.97e-17,90;UBERON:0002405,8.91e-17,93;UBERON:0001434,2.13e-15,100;UBERON:0003081,1.07e-11,203;UBERON:0001136,2.64e-08,1;UBERON:0001343,2.64e-08,1;UBERON:0004910,2.64e-08,1;UBERON:0005154,2.64e-08,1;UBERON:0005295,2.64e-08,1;UBERON:0004813,2.64e-08,1;UBERON:0005297,2.64e-08,1;UBERON:0005294,2.64e-08,1;UBERON:0010141,2.64e-08,1;UBERON:0005891,2.64e-08,1;UBERON:0002204,5.00e-08,167;UBERON:0000926,5.95e-07,315;UBERON:0004120,5.95e-07,315;UBERON:0006603,5.95e-07,315;UBERON:0002331,6.09e-07,10;UBERON:0000358,6.09e-07,10;UBERON:0000307,6.09e-07,10;UBERON:0000091,6.09e-07,10;UBERON:0000087,6.09e-07,10;UBERON:0007010,6.09e-07,10;UBERON:0007806,6.09e-07,10;UBERON:0008780,6.09e-07,10;UBERON:0005728,6.09e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,1.42169232487422,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,3.71647645074124,1.1507695692886,0.512321413058201,1.6553756092201,35.1640594351351,40.0200503821972,46.0450054420762,0,0,0.224723484445085,41.6274093624427,42.3626315740444,69.0484095862965,0,0,0,17.412554317715,11.9150897185139,36.1236904417433,0,0,0,22.3997815974346,27.2525450630798,69.9381876244355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,1.12101712596307,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.552700035571697,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,1.13061588384802,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,1.47798971368783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,2.9728508020115,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63390144493182,1.72989514525104,1.98401704060365,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,2.07047417247523,0.638341257770182,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,1.88212655758537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0.506827321959218,0,0,0,0,0,0,0,0,0,0,3.19979833367888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.699588091474503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,1.42169232487422,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,3.71647645074124,1.1507695692886,0.512321413058201,1.6553756092201,35.1640594351351,40.0200503821972,46.0450054420762,0,0,0.224723484445085,41.6274093624427,42.3626315740444,69.0484095862965,0,0,0,17.412554317715,11.9150897185139,36.1236904417433,0,0,0,22.3997815974346,27.2525450630798,69.9381876244355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,1.12101712596307,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0.552700035571697,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,1.13061588384802,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,1.47798971368783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,2.9728508020115,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63390144493182,1.72989514525104,1.98401704060365,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,2.07047417247523,0.638341257770182,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,1.88212655758537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0.506827321959218,0,0,0,0,0,0,0,0,0,0,3.19979833367888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.699588091474503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr12:9820699..9820712,+ | |short_description=p@chr12:9820699..9820712,+ | ||
}} | }} |
Latest revision as of 14:00, 24 July 2015
Short description: | p@chr12:9820699..9820712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9820699..9820712, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.52e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.52e-36 | 42 |
defensive cell | 1.99e-31 | 48 |
phagocyte | 1.99e-31 | 48 |
myeloid lineage restricted progenitor cell | 8.77e-25 | 66 |
monopoietic cell | 1.44e-24 | 59 |
monocyte | 1.44e-24 | 59 |
monoblast | 1.44e-24 | 59 |
promonocyte | 1.44e-24 | 59 |
granulocyte monocyte progenitor cell | 2.25e-24 | 67 |
macrophage dendritic cell progenitor | 1.10e-23 | 61 |
myeloid leukocyte | 1.71e-22 | 72 |
nongranular leukocyte | 5.43e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 5.05e-18 | 120 |
leukocyte | 2.16e-17 | 136 |
hematopoietic cell | 2.36e-17 | 177 |
hematopoietic oligopotent progenitor cell | 4.05e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.05e-14 | 161 |
myeloid cell | 4.84e-14 | 108 |
common myeloid progenitor | 4.84e-14 | 108 |
hematopoietic stem cell | 2.25e-13 | 168 |
meningothelial cell | 2.13e-08 | 1 |
androgen binding protein secreting cell | 2.64e-08 | 1 |
seminiferous tubule epithelial cell | 2.64e-08 | 1 |
Sertoli cell | 2.64e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.26e-23 | 98 |
blood island | 7.26e-23 | 98 |
bone marrow | 3.65e-21 | 76 |
hemolymphoid system | 1.96e-20 | 108 |
bone element | 2.07e-19 | 82 |
skeletal element | 1.97e-17 | 90 |
immune system | 8.91e-17 | 93 |
skeletal system | 2.13e-15 | 100 |
lateral plate mesoderm | 1.07e-11 | 203 |
mesothelium | 2.64e-08 | 1 |
seminiferous tubule of testis | 2.64e-08 | 1 |
epithelium of male gonad | 2.64e-08 | 1 |
epithelial cord | 2.64e-08 | 1 |
sex cord | 2.64e-08 | 1 |
seminiferous tubule epithelium | 2.64e-08 | 1 |
testis sex cord | 2.64e-08 | 1 |
genital ridge | 2.64e-08 | 1 |
primitive sex cord of indifferent gonad | 2.64e-08 | 1 |
coelomic epithelium | 2.64e-08 | 1 |
musculoskeletal system | 5.00e-08 | 167 |
mesoderm | 5.95e-07 | 315 |
mesoderm-derived structure | 5.95e-07 | 315 |
presumptive mesoderm | 5.95e-07 | 315 |
umbilical cord | 6.09e-07 | 10 |
blastocyst | 6.09e-07 | 10 |
blastula | 6.09e-07 | 10 |
bilaminar disc | 6.09e-07 | 10 |
inner cell mass | 6.09e-07 | 10 |
cleaving embryo | 6.09e-07 | 10 |
connecting stalk | 6.09e-07 | 10 |
inner cell mass derived epiblast | 6.09e-07 | 10 |
extraembryonic mesoderm | 6.09e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.59e-08 | 1 |
cutaneous T cell lymphoma | 1.59e-08 | 1 |
mycosis fungoides | 1.59e-08 | 1 |
acute leukemia | 1.71e-08 | 1 |
central nervous system cancer | 2.13e-08 | 1 |
meningioma | 2.13e-08 | 1 |
lymphoma | 6.75e-07 | 10 |