FFCP PHASE1:Hg19::chr13:31288341..31288344,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:31288341..31288344,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr13:31288341..31288344,- | |description=CAGE_peak_at_chr13:31288341..31288344,- | ||
|id=chr13:31288341..31288344,- | |id=chr13:31288341..31288344,- | ||
|ontology_enrichment_celltype=CL:0002057!2.69e-39!42;CL:0000860!2.33e-36!45;CL:0000766!4.81e-32!76;CL:0002194!3.70e-24!63;CL:0000576!3.70e-24!63;CL:0000040!3.70e-24!63;CL:0000559!3.70e-24!63;CL:0002009!2.77e-23!65;CL:0000738!3.92e-23!140;CL:0000839!2.59e-21!70;CL:0000557!5.95e-21!71;CL:0000763!5.77e-20!112;CL:0000049!5.77e-20!112;CL:0000037!1.35e-17!172;CL:0000566!1.35e-17!172;CL:0000988!1.37e-17!182;CL:0002087!1.06e-16!119;CL:0000842!2.45e-15!3;CL:0000094!4.39e-15!8;CL:0002032!5.66e-13!165;CL:0000837!5.66e-13!165;CL:0000080!8.02e-13!6;CL:0000224!1.28e-11!4;CL:0002031!2.16e-11!124;CL:0000771!3.94e-11!2;CL:0000081!6.90e-11!11;CL:0002393!9.23e-09!9;CL:0002397!9.23e-09!9;CL:0000134!2.39e-08!358;CL:0002320!4.80e-08!365;CL:0000219!1.17e-07!390;CL:0000767!3.54e-07!3 | |ontology_enrichment_celltype=CL:0002057!2.69e-39!42;CL:0000860!2.33e-36!45;CL:0000766!4.81e-32!76;CL:0002194!3.70e-24!63;CL:0000576!3.70e-24!63;CL:0000040!3.70e-24!63;CL:0000559!3.70e-24!63;CL:0002009!2.77e-23!65;CL:0000738!3.92e-23!140;CL:0000839!2.59e-21!70;CL:0000557!5.95e-21!71;CL:0000763!5.77e-20!112;CL:0000049!5.77e-20!112;CL:0000037!1.35e-17!172;CL:0000566!1.35e-17!172;CL:0000988!1.37e-17!182;CL:0002087!1.06e-16!119;CL:0000842!2.45e-15!3;CL:0000094!4.39e-15!8;CL:0002032!5.66e-13!165;CL:0000837!5.66e-13!165;CL:0000080!8.02e-13!6;CL:0000224!1.28e-11!4;CL:0002031!2.16e-11!124;CL:0000771!3.94e-11!2;CL:0000081!6.90e-11!11;CL:0002393!9.23e-09!9;CL:0002397!9.23e-09!9;CL:0000134!2.39e-08!358;CL:0002320!4.80e-08!365;CL:0000219!1.17e-07!390;CL:0000767!3.54e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000226;1.67e-49;3!CL:0000842;1.67e-49;3!CL:0000771;1.11e-34;2!CL:0002393;1.19e-25;6!CL:0002397;1.19e-25;6!CL:0000094;1.76e-19;8!CL:0000081;2.35e-14;11!CL:0000766;7.32e-08;69!CL:0000775;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000226,2.33e-49,3;CL:0000842,2.33e-49,3;CL:0000771,1.11e-34,2;CL:0000094,1.76e-19,8;CL:0002393,2.40e-17,9;CL:0002397,2.40e-17,9;CL:0000081,2.35e-14,11;CL:0000766,4.79e-14,72;CL:0000738,8.82e-14,136;CL:0000037,5.32e-11,168;CL:0000988,2.14e-10,177;CL:0000860,6.18e-10,42;CL:0002057,6.18e-10,42;CL:0000763,3.26e-09,108;CL:0000049,3.26e-09,108;CL:0000473,1.08e-08,48;CL:0000234,1.08e-08,48;CL:0002087,1.55e-08,115;CL:0002194,5.97e-07,59;CL:0000576,5.97e-07,59;CL:0000040,5.97e-07,59;CL:0000559,5.97e-07,59;CL:0000775,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.33e-17;1!CL:0002057;3.25e-07;42!UBERON:0003056;9.91e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.64e-22!102;UBERON:0003061!2.64e-22!102;UBERON:0002193!8.14e-20!112;UBERON:0002371!4.19e-18!80;UBERON:0001474!1.55e-16!86;UBERON:0004765!1.99e-13!101;UBERON:0001434!1.99e-13!101;UBERON:0002405!1.20e-12!115;UBERON:0003081!1.84e-08!216;UBERON:0000178!1.15e-07!15;UBERON:0000179!1.15e-07!15;UBERON:0000463!1.15e-07!15;UBERON:0002384!1.24e-07!375;UBERON:0002204!2.84e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!2.64e-22!102;UBERON:0003061!2.64e-22!102;UBERON:0002193!8.14e-20!112;UBERON:0002371!4.19e-18!80;UBERON:0001474!1.55e-16!86;UBERON:0004765!1.99e-13!101;UBERON:0001434!1.99e-13!101;UBERON:0002405!1.20e-12!115;UBERON:0003081!1.84e-08!216;UBERON:0000178!1.15e-07!15;UBERON:0000179!1.15e-07!15;UBERON:0000463!1.15e-07!15;UBERON:0002384!1.24e-07!375;UBERON:0002204!2.84e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.33e-17;1!UBERON:0001785;1.33e-17;1!UBERON:0002464;1.33e-17;1!UBERON:0004904;1.33e-17;1!UBERON:0001021;1.33e-17;1!UBERON:0000178;1.76e-10;15!UBERON:0000179;1.76e-10;15!UBERON:0000463;1.76e-10;15!UBERON:0003714;1.78e-09;2!UBERON:0005162;1.78e-09;2!UBERON:0000122;1.78e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.03e-17,1;UBERON:0001785,1.03e-17,1;UBERON:0002464,1.03e-17,1;UBERON:0004904,1.03e-17,1;UBERON:0001021,1.03e-17,1;UBERON:0003902,1.03e-17,1;UBERON:0005425,1.03e-17,1;UBERON:0000178,1.88e-10,15;UBERON:0000179,1.88e-10,15;UBERON:0000463,1.88e-10,15;UBERON:0002390,4.14e-10,98;UBERON:0003061,4.14e-10,98;UBERON:0003714,1.57e-09,2;UBERON:0005162,1.57e-09,2;UBERON:0000122,1.57e-09,2;UBERON:0002193,3.99e-09,108 | |||
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|short_description=p@chr13:31288341..31288344,- | |short_description=p@chr13:31288341..31288344,- | ||
}} | }} |
Latest revision as of 15:33, 24 July 2015
Short description: | p@chr13:31288341..31288344, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:31288341..31288344, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 2.33e-49 | 3 |
mononuclear cell | 2.33e-49 | 3 |
eosinophil | 1.11e-34 | 2 |
granulocyte | 1.76e-19 | 8 |
intermediate monocyte | 2.40e-17 | 9 |
CD14-positive, CD16-positive monocyte | 2.40e-17 | 9 |
blood cell | 2.35e-14 | 11 |
myeloid leukocyte | 4.79e-14 | 72 |
leukocyte | 8.82e-14 | 136 |
hematopoietic stem cell | 5.32e-11 | 168 |
hematopoietic cell | 2.14e-10 | 177 |
classical monocyte | 6.18e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.18e-10 | 42 |
myeloid cell | 3.26e-09 | 108 |
common myeloid progenitor | 3.26e-09 | 108 |
defensive cell | 1.08e-08 | 48 |
phagocyte | 1.08e-08 | 48 |
nongranular leukocyte | 1.55e-08 | 115 |
monopoietic cell | 5.97e-07 | 59 |
monocyte | 5.97e-07 | 59 |
monoblast | 5.97e-07 | 59 |
promonocyte | 5.97e-07 | 59 |
neutrophil | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.03e-17 | 1 |
cranial nerve | 1.03e-17 | 1 |
nerve trunk | 1.03e-17 | 1 |
nerve connecting eye with brain | 1.03e-17 | 1 |
nerve | 1.03e-17 | 1 |
retinal neural layer | 1.03e-17 | 1 |
presumptive neural retina | 1.03e-17 | 1 |
blood | 1.88e-10 | 15 |
haemolymphatic fluid | 1.88e-10 | 15 |
organism substance | 1.88e-10 | 15 |
hematopoietic system | 4.14e-10 | 98 |
blood island | 4.14e-10 | 98 |
neural tissue | 1.57e-09 | 2 |
multi cell component structure | 1.57e-09 | 2 |
neuron projection bundle | 1.57e-09 | 2 |
hemolymphoid system | 3.99e-09 | 108 |