FFCP PHASE1:Hg19::chr13:46913340..46913351,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:46913340..46913351,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr13:46913340..46913351,- | |description=CAGE_peak_at_chr13:46913340..46913351,- | ||
|id=chr13:46913340..46913351,- | |id=chr13:46913340..46913351,- | ||
|ontology_enrichment_celltype=CL:0002057!7.30e-107!42;CL:0000860!2.85e-99!45;CL:0002194!3.68e-72!63;CL:0000576!3.68e-72!63;CL:0000040!3.68e-72!63;CL:0000559!3.68e-72!63;CL:0002009!9.34e-70!65;CL:0000766!8.49e-67!76;CL:0000839!2.45e-64!70;CL:0000557!2.42e-63!71;CL:0002087!5.42e-48!119;CL:0000738!1.00e-44!140;CL:0000763!3.89e-43!112;CL:0000049!3.89e-43!112;CL:0002031!4.39e-38!124;CL:0000037!5.52e-35!172;CL:0000566!5.52e-35!172;CL:0000988!1.23e-32!182;CL:0002032!1.11e-30!165;CL:0000837!1.11e-30!165;CL:0002393!7.89e-24!9;CL:0002397!7.89e-24!9;CL:0000842!6.32e-14!3;CL:0000134!1.17e-12!358;CL:0002320!2.92e-12!365;CL:0000219!7.50e-11!390;CL:0000224!1.43e-10!4;CL:0000048!3.65e-09!430;CL:0000723!6.34e-09!436;CL:0000034!1.30e-08!444;CL:0000080!3.38e-07!6;CL:0000767!3.44e-07!3;CL:0000875!9.91e-07!3;CL:0002396!9.91e-07!3 | |ontology_enrichment_celltype=CL:0002057!7.30e-107!42;CL:0000860!2.85e-99!45;CL:0002194!3.68e-72!63;CL:0000576!3.68e-72!63;CL:0000040!3.68e-72!63;CL:0000559!3.68e-72!63;CL:0002009!9.34e-70!65;CL:0000766!8.49e-67!76;CL:0000839!2.45e-64!70;CL:0000557!2.42e-63!71;CL:0002087!5.42e-48!119;CL:0000738!1.00e-44!140;CL:0000763!3.89e-43!112;CL:0000049!3.89e-43!112;CL:0002031!4.39e-38!124;CL:0000037!5.52e-35!172;CL:0000566!5.52e-35!172;CL:0000988!1.23e-32!182;CL:0002032!1.11e-30!165;CL:0000837!1.11e-30!165;CL:0002393!7.89e-24!9;CL:0002397!7.89e-24!9;CL:0000842!6.32e-14!3;CL:0000134!1.17e-12!358;CL:0002320!2.92e-12!365;CL:0000219!7.50e-11!390;CL:0000224!1.43e-10!4;CL:0000048!3.65e-09!430;CL:0000723!6.34e-09!436;CL:0000034!1.30e-08!444;CL:0000080!3.38e-07!6;CL:0000767!3.44e-07!3;CL:0000875!9.91e-07!3;CL:0002396!9.91e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.40e-48;33!CL:0002057;1.40e-48;33!CL:0000473;6.73e-35;39!CL:0000234;6.73e-35;39!CL:0000576;2.02e-31;48!CL:0000766;8.09e-23;69!CL:0002393;5.45e-17;6!CL:0002397;5.45e-17;6!CL:0002087;1.43e-12;104!CL:0000763;1.22e-11;100!CL:0000738;5.56e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.59e-65,42;CL:0002057,2.59e-65,42;CL:0000473,6.38e-57,48;CL:0000234,6.38e-57,48;CL:0002194,3.65e-45,59;CL:0000576,3.65e-45,59;CL:0000040,3.65e-45,59;CL:0000559,3.65e-45,59;CL:0002009,1.20e-43,61;CL:0000766,1.23e-41,72;CL:0000839,3.01e-40,66;CL:0000557,1.26e-39,67;CL:0000763,3.20e-27,108;CL:0000049,3.20e-27,108;CL:0002087,2.10e-22,115;CL:0002031,2.15e-21,120;CL:0000738,3.13e-21,136;CL:0002032,1.27e-17,161;CL:0000837,1.27e-17,161;CL:0000037,8.38e-17,168;CL:0000988,7.66e-16,177;CL:0002393,1.63e-11,9;CL:0002397,1.63e-11,9;CL:0000134,9.02e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;8.71e-42;42!UBERON:0005425;3.85e-12;1!CL:0000049;3.16e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.67e-55!80;UBERON:0001474!3.55e-51!86;UBERON:0002390!6.69e-51!102;UBERON:0003061!6.69e-51!102;UBERON:0002193!1.30e-48!112;UBERON:0004765!1.39e-42!101;UBERON:0001434!1.39e-42!101;UBERON:0002405!4.10e-39!115;UBERON:0002204!5.39e-23!167;UBERON:0003081!3.84e-20!216;UBERON:0002384!1.03e-11!375;UBERON:0000926!5.10e-07!448;UBERON:0004120!5.10e-07!448;UBERON:0006603!5.10e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!1.67e-55!80;UBERON:0001474!3.55e-51!86;UBERON:0002390!6.69e-51!102;UBERON:0003061!6.69e-51!102;UBERON:0002193!1.30e-48!112;UBERON:0004765!1.39e-42!101;UBERON:0001434!1.39e-42!101;UBERON:0002405!4.10e-39!115;UBERON:0002204!5.39e-23!167;UBERON:0003081!3.84e-20!216;UBERON:0002384!1.03e-11!375;UBERON:0000926!5.10e-07!448;UBERON:0004120!5.10e-07!448;UBERON:0006603!5.10e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.85e-12;1!UBERON:0001785;3.85e-12;1!UBERON:0002464;3.85e-12;1!UBERON:0004904;3.85e-12;1!UBERON:0001021;3.85e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.06e-35,76;UBERON:0001474,4.10e-32,82;UBERON:0004765,4.07e-29,90;UBERON:0002405,4.01e-28,93;UBERON:0002390,1.33e-26,98;UBERON:0003061,1.33e-26,98;UBERON:0001434,4.92e-26,100;UBERON:0002193,5.64e-24,108;UBERON:0002204,8.16e-15,167;UBERON:0000941,3.85e-12,1;UBERON:0001785,3.85e-12,1;UBERON:0002464,3.85e-12,1;UBERON:0004904,3.85e-12,1;UBERON:0001021,3.85e-12,1;UBERON:0003902,3.85e-12,1;UBERON:0005425,3.85e-12,1;UBERON:0003081,8.22e-12,203;UBERON:0000926,8.38e-07,315;UBERON:0004120,8.38e-07,315;UBERON:0006603,8.38e-07,315 | |||
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|short_description=p@chr13:46913340..46913351,- | |short_description=p@chr13:46913340..46913351,- | ||
}} | }} |
Latest revision as of 16:23, 24 July 2015
Short description: | p@chr13:46913340..46913351, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:46913340..46913351, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.59e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.59e-65 | 42 |
defensive cell | 6.38e-57 | 48 |
phagocyte | 6.38e-57 | 48 |
monopoietic cell | 3.65e-45 | 59 |
monocyte | 3.65e-45 | 59 |
monoblast | 3.65e-45 | 59 |
promonocyte | 3.65e-45 | 59 |
macrophage dendritic cell progenitor | 1.20e-43 | 61 |
myeloid leukocyte | 1.23e-41 | 72 |
myeloid lineage restricted progenitor cell | 3.01e-40 | 66 |
granulocyte monocyte progenitor cell | 1.26e-39 | 67 |
myeloid cell | 3.20e-27 | 108 |
common myeloid progenitor | 3.20e-27 | 108 |
nongranular leukocyte | 2.10e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.15e-21 | 120 |
leukocyte | 3.13e-21 | 136 |
hematopoietic oligopotent progenitor cell | 1.27e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-17 | 161 |
hematopoietic stem cell | 8.38e-17 | 168 |
hematopoietic cell | 7.66e-16 | 177 |
intermediate monocyte | 1.63e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.63e-11 | 9 |
mesenchymal cell | 9.02e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.06e-35 | 76 |
bone element | 4.10e-32 | 82 |
skeletal element | 4.07e-29 | 90 |
immune system | 4.01e-28 | 93 |
hematopoietic system | 1.33e-26 | 98 |
blood island | 1.33e-26 | 98 |
skeletal system | 4.92e-26 | 100 |
hemolymphoid system | 5.64e-24 | 108 |
musculoskeletal system | 8.16e-15 | 167 |
cranial nerve II | 3.85e-12 | 1 |
cranial nerve | 3.85e-12 | 1 |
nerve trunk | 3.85e-12 | 1 |
nerve connecting eye with brain | 3.85e-12 | 1 |
nerve | 3.85e-12 | 1 |
retinal neural layer | 3.85e-12 | 1 |
presumptive neural retina | 3.85e-12 | 1 |
lateral plate mesoderm | 8.22e-12 | 203 |
mesoderm | 8.38e-07 | 315 |
mesoderm-derived structure | 8.38e-07 | 315 |
presumptive mesoderm | 8.38e-07 | 315 |