FFCP PHASE1:Hg19::chr13:99630159..99630163,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB384096_5end | |association_with_transcript=0bp_to_AB384096_5end | ||
|cluster_id=chr13:99630159..99630163,- | |||
|description=CAGE_peak_1_at_AB384096_5end | |description=CAGE_peak_1_at_AB384096_5end | ||
|id=chr13:99630159..99630163,- | |id=chr13:99630159..99630163,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000632;2.45e-12;3!CL:0002188;6.33e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.31e-12,3;CL:0002188,5.73e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-42!57;UBERON:0005068!1.71e-42!57;UBERON:0006241!1.71e-42!57;UBERON:0007135!1.71e-42!57;UBERON:0003075!2.71e-38!86;UBERON:0007284!2.71e-38!86;UBERON:0002346!3.48e-36!90;UBERON:0005743!1.22e-35!86;UBERON:0000073!2.01e-33!94;UBERON:0001016!2.01e-33!94;UBERON:0001017!3.18e-33!82;UBERON:0002616!2.46e-32!59;UBERON:0000955!1.04e-30!69;UBERON:0006238!1.04e-30!69;UBERON:0007023!1.19e-26!115;UBERON:0002780!6.42e-26!41;UBERON:0001890!6.42e-26!41;UBERON:0006240!6.42e-26!41;UBERON:0001893!1.51e-25!34;UBERON:0002020!2.55e-25!34;UBERON:0003528!2.55e-25!34;UBERON:0003080!3.45e-25!42;UBERON:0002791!2.01e-23!33;UBERON:0003056!2.22e-23!61;UBERON:0001869!4.77e-21!32;UBERON:0000153!1.21e-20!129;UBERON:0007811!1.21e-20!129;UBERON:0000033!1.38e-20!123;UBERON:0003076!2.00e-19!15;UBERON:0003057!2.00e-19!15;UBERON:0004121!2.54e-19!169;UBERON:0000924!1.19e-18!173;UBERON:0006601!1.19e-18!173;UBERON:0002308!2.90e-17!9;UBERON:0000125!2.90e-17!9;UBERON:0002298!1.67e-14!8;UBERON:0002619!2.07e-14!22;UBERON:0001950!3.84e-13!20;UBERON:0000956!1.82e-12!25;UBERON:0000203!1.82e-12!25;UBERON:0004733!3.28e-12!12;UBERON:0002028!3.28e-12!12;UBERON:0007277!3.28e-12!12;UBERON:0000025!4.49e-12!194;UBERON:0009663!5.47e-12!7;UBERON:0004732!3.46e-11!13;UBERON:0000483!3.49e-11!309;UBERON:0000119!5.70e-11!312;UBERON:0000988!1.85e-10!3;UBERON:0006331!2.04e-10!3;UBERON:0002240!3.17e-10!3;UBERON:0004111!1.82e-09!241;UBERON:0002420!3.15e-09!9;UBERON:0007245!3.15e-09!9;UBERON:0010009!3.15e-09!9;UBERON:0010011!3.15e-09!9;UBERON:0000454!3.15e-09!9;UBERON:0000475!4.56e-09!365;UBERON:0000200!9.31e-09!6;UBERON:0002680!1.45e-08!9;UBERON:0001895!1.45e-08!9;UBERON:0010092!1.45e-08!9;UBERON:0000477!2.05e-08!286;UBERON:0000369!4.35e-08!4;UBERON:0002435!4.35e-08!4;UBERON:0000204!4.35e-08!4;UBERON:0010082!4.35e-08!4;UBERON:0002148!2.76e-07!2;UBERON:0009662!2.76e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!1.71e-42!57;UBERON:0005068!1.71e-42!57;UBERON:0006241!1.71e-42!57;UBERON:0007135!1.71e-42!57;UBERON:0003075!2.71e-38!86;UBERON:0007284!2.71e-38!86;UBERON:0002346!3.48e-36!90;UBERON:0005743!1.22e-35!86;UBERON:0000073!2.01e-33!94;UBERON:0001016!2.01e-33!94;UBERON:0001017!3.18e-33!82;UBERON:0002616!2.46e-32!59;UBERON:0000955!1.04e-30!69;UBERON:0006238!1.04e-30!69;UBERON:0007023!1.19e-26!115;UBERON:0002780!6.42e-26!41;UBERON:0001890!6.42e-26!41;UBERON:0006240!6.42e-26!41;UBERON:0001893!1.51e-25!34;UBERON:0002020!2.55e-25!34;UBERON:0003528!2.55e-25!34;UBERON:0003080!3.45e-25!42;UBERON:0002791!2.01e-23!33;UBERON:0003056!2.22e-23!61;UBERON:0001869!4.77e-21!32;UBERON:0000153!1.21e-20!129;UBERON:0007811!1.21e-20!129;UBERON:0000033!1.38e-20!123;UBERON:0003076!2.00e-19!15;UBERON:0003057!2.00e-19!15;UBERON:0004121!2.54e-19!169;UBERON:0000924!1.19e-18!173;UBERON:0006601!1.19e-18!173;UBERON:0002308!2.90e-17!9;UBERON:0000125!2.90e-17!9;UBERON:0002298!1.67e-14!8;UBERON:0002619!2.07e-14!22;UBERON:0001950!3.84e-13!20;UBERON:0000956!1.82e-12!25;UBERON:0000203!1.82e-12!25;UBERON:0004733!3.28e-12!12;UBERON:0002028!3.28e-12!12;UBERON:0007277!3.28e-12!12;UBERON:0000025!4.49e-12!194;UBERON:0009663!5.47e-12!7;UBERON:0004732!3.46e-11!13;UBERON:0000483!3.49e-11!309;UBERON:0000119!5.70e-11!312;UBERON:0000988!1.85e-10!3;UBERON:0006331!2.04e-10!3;UBERON:0002240!3.17e-10!3;UBERON:0004111!1.82e-09!241;UBERON:0002420!3.15e-09!9;UBERON:0007245!3.15e-09!9;UBERON:0010009!3.15e-09!9;UBERON:0010011!3.15e-09!9;UBERON:0000454!3.15e-09!9;UBERON:0000475!4.56e-09!365;UBERON:0000200!9.31e-09!6;UBERON:0002680!1.45e-08!9;UBERON:0001895!1.45e-08!9;UBERON:0010092!1.45e-08!9;UBERON:0000477!2.05e-08!286;UBERON:0000369!4.35e-08!4;UBERON:0002435!4.35e-08!4;UBERON:0000204!4.35e-08!4;UBERON:0010082!4.35e-08!4;UBERON:0002148!2.76e-07!2;UBERON:0009662!2.76e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;4.27e-34;1!UBERON:0011215;4.27e-34;1!UBERON:0001018;4.27e-34;1!UBERON:0002473;4.27e-34;1!UBERON:0005340;4.27e-34;1!UBERON:0003544;4.27e-34;1!UBERON:0005970;4.27e-34;1!UBERON:0002316;4.27e-34;1!UBERON:0001020;4.27e-34;1!UBERON:0002437;4.27e-34;1!UBERON:0001897;8.34e-18;2!UBERON:0001875;8.34e-18;2!UBERON:0005162;8.34e-18;2!UBERON:0000122;8.34e-18;2!UBERON:0006514;8.34e-18;2!UBERON:0010225;8.34e-18;2!UBERON:0000988;2.45e-12;3!UBERON:0002784;1.38e-09;4!UBERON:0000073;1.64e-09;53!UBERON:0002616;1.64e-09;53!UBERON:0002780;1.07e-07;41!UBERON:0001890;1.07e-07;41!UBERON:0002298;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,1.84e-34,1;UBERON:0011215,1.84e-34,1;UBERON:0001018,1.84e-34,1;UBERON:0002473,1.84e-34,1;UBERON:0005340,1.84e-34,1;UBERON:0003544,1.84e-34,1;UBERON:0005970,1.84e-34,1;UBERON:0002316,1.84e-34,1;UBERON:0001020,1.84e-34,1;UBERON:0002437,1.84e-34,1;UBERON:0005162,5.48e-18,2;UBERON:0000122,5.48e-18,2;UBERON:0001897,9.07e-18,2;UBERON:0010225,9.07e-18,2;UBERON:0001875,1.07e-17,2;UBERON:0006514,1.07e-17,2;UBERON:0000988,3.24e-12,3;UBERON:0000073,2.46e-10,53;UBERON:0002616,2.46e-10,53;UBERON:0001049,8.06e-10,56;UBERON:0005068,8.06e-10,56;UBERON:0006241,8.06e-10,56;UBERON:0007135,8.06e-10,56;UBERON:0002784,1.44e-09,4;UBERON:0000955,4.31e-08,68;UBERON:0006238,4.31e-08,68;UBERON:0002780,7.94e-08,41;UBERON:0001890,7.94e-08,41;UBERON:0003080,7.94e-08,41;UBERON:0006240,7.94e-08,41;UBERON:0001017,6.74e-07,81;UBERON:0003075,6.74e-07,82;UBERON:0007284,6.74e-07,82;UBERON:0002298,9.49e-07,6 | |||
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|short_description=p1@AB384096 | |short_description=p1@AB384096 | ||
}} | }} |
Latest revision as of 17:42, 24 July 2015
Short description: | p1@AB384096 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB384096_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AB384096_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.31e-12 | 3 |
glomerular endothelial cell | 5.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 1.84e-34 | 1 |
central nervous system cell part cluster | 1.84e-34 | 1 |
axon tract | 1.84e-34 | 1 |
intercerebral commissure | 1.84e-34 | 1 |
dorsal telencephalic commissure | 1.84e-34 | 1 |
brain white matter | 1.84e-34 | 1 |
brain commissure | 1.84e-34 | 1 |
white matter | 1.84e-34 | 1 |
nervous system commissure | 1.84e-34 | 1 |
cerebral hemisphere white matter | 1.84e-34 | 1 |
multi cell component structure | 5.48e-18 | 2 |
neuron projection bundle | 5.48e-18 | 2 |
dorsal plus ventral thalamus | 9.07e-18 | 2 |
thalamic complex | 9.07e-18 | 2 |
globus pallidus | 1.07e-17 | 2 |
pallidum | 1.07e-17 | 2 |
pons | 3.24e-12 | 3 |
regional part of nervous system | 2.46e-10 | 53 |
regional part of brain | 2.46e-10 | 53 |
neural tube | 8.06e-10 | 56 |
neural rod | 8.06e-10 | 56 |
future spinal cord | 8.06e-10 | 56 |
neural keel | 8.06e-10 | 56 |
regional part of diencephalon | 1.44e-09 | 4 |
brain | 4.31e-08 | 68 |
future brain | 4.31e-08 | 68 |
regional part of forebrain | 7.94e-08 | 41 |
forebrain | 7.94e-08 | 41 |
anterior neural tube | 7.94e-08 | 41 |
future forebrain | 7.94e-08 | 41 |
central nervous system | 6.74e-07 | 81 |
neural plate | 6.74e-07 | 82 |
presumptive neural plate | 6.74e-07 | 82 |
brainstem | 9.49e-07 | 6 |