FFCP PHASE1:Hg19::chr14:55794660..55794664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:55794660..55794664,+ | |||
|description=CAGE_peak_at_chr14:55794660..55794664,+ | |description=CAGE_peak_at_chr14:55794660..55794664,+ | ||
|id=chr14:55794660..55794664,+ | |id=chr14:55794660..55794664,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.58e-12!42;CL:0000860!3.57e-12!45;CL:0000839!2.40e-10!70;CL:0002031!5.35e-10!124;CL:0000557!7.70e-10!71;CL:0000766!1.37e-09!76;CL:0000738!1.68e-09!140;CL:0000037!1.76e-09!172;CL:0000566!1.76e-09!172;CL:0002032!3.85e-09!165;CL:0000837!3.85e-09!165;CL:0000763!5.45e-09!112;CL:0000049!5.45e-09!112;CL:0002009!2.15e-08!65;CL:0002087!5.48e-08!119;CL:0000988!1.02e-07!182;CL:0002194!1.36e-07!63;CL:0000576!1.36e-07!63;CL:0000040!1.36e-07!63;CL:0000559!1.36e-07!63 | |ontology_enrichment_celltype=CL:0002057!1.58e-12!42;CL:0000860!3.57e-12!45;CL:0000839!2.40e-10!70;CL:0002031!5.35e-10!124;CL:0000557!7.70e-10!71;CL:0000766!1.37e-09!76;CL:0000738!1.68e-09!140;CL:0000037!1.76e-09!172;CL:0000566!1.76e-09!172;CL:0002032!3.85e-09!165;CL:0000837!3.85e-09!165;CL:0000763!5.45e-09!112;CL:0000049!5.45e-09!112;CL:0002009!2.15e-08!65;CL:0002087!5.48e-08!119;CL:0000988!1.02e-07!182;CL:0002194!1.36e-07!63;CL:0000576!1.36e-07!63;CL:0000040!1.36e-07!63;CL:0000559!1.36e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.69e-10;33!CL:0002057;5.69e-10;33!CL:0000764;4.00e-08;2!CL:0000558;4.00e-08;2!CL:0000576;6.29e-08;48!CL:0000473;1.08e-07;39!CL:0000234;1.08e-07;39 | |ontology_enrichment_celltype_v019=CL:0000860;5.69e-10;33!CL:0002057;5.69e-10;33!CL:0000764;4.00e-08;2!CL:0000558;4.00e-08;2!CL:0000576;6.29e-08;48!CL:0000473;1.08e-07;39!CL:0000234;1.08e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.09e-13,42;CL:0002057,2.09e-13,42;CL:0000473,2.44e-11,48;CL:0000234,2.44e-11,48;CL:0000839,3.26e-11,66;CL:0000766,4.69e-10,72;CL:0002031,6.32e-10,120;CL:0002194,1.82e-08,59;CL:0000576,1.82e-08,59;CL:0000040,1.82e-08,59;CL:0000559,1.82e-08,59;CL:0000557,2.88e-08,67;CL:0000738,3.26e-08,136;CL:0000764,3.37e-08,2;CL:0000765,3.37e-08,2;CL:0000050,3.37e-08,2;CL:0000038,3.37e-08,2;CL:0000558,3.37e-08,2;CL:0000547,3.37e-08,2;CL:0000549,3.37e-08,2;CL:0000550,3.37e-08,2;CL:0000552,3.37e-08,2;CL:0002009,4.25e-08,61;CL:0002032,9.97e-08,161;CL:0000837,9.97e-08,161;CL:0002087,1.58e-07,115;CL:0000763,2.83e-07,108;CL:0000049,2.83e-07,108;CL:0000037,3.51e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.98e-09;42 | |ontology_enrichment_development_v019=CL:0002057;2.98e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.70e-18!115;UBERON:0001049!2.79e-12!57;UBERON:0005068!2.79e-12!57;UBERON:0006241!2.79e-12!57;UBERON:0007135!2.79e-12!57;UBERON:0002616!7.68e-10!59;UBERON:0002780!2.65e-09!41;UBERON:0001890!2.65e-09!41;UBERON:0006240!2.65e-09!41;UBERON:0002619!3.54e-09!22;UBERON:0003080!8.39e-09!42;UBERON:0002020!9.73e-09!34;UBERON:0003528!9.73e-09!34;UBERON:0002371!2.42e-08!80;UBERON:0001893!4.62e-08!34;UBERON:0001950!4.86e-08!20;UBERON:0001869!4.97e-08!32;UBERON:0002791!9.41e-08!33;UBERON:0000955!1.01e-07!69;UBERON:0006238!1.01e-07!69;UBERON:0002390!1.05e-07!102;UBERON:0003061!1.05e-07!102;UBERON:0001474!1.39e-07!86;UBERON:0002346!2.61e-07!90;UBERON:0003075!2.99e-07!86;UBERON:0007284!2.99e-07!86;UBERON:0001017!3.10e-07!82;UBERON:0000956!3.59e-07!25;UBERON:0000203!3.59e-07!25;UBERON:0002193!5.30e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!4.70e-18!115;UBERON:0001049!2.79e-12!57;UBERON:0005068!2.79e-12!57;UBERON:0006241!2.79e-12!57;UBERON:0007135!2.79e-12!57;UBERON:0002616!7.68e-10!59;UBERON:0002780!2.65e-09!41;UBERON:0001890!2.65e-09!41;UBERON:0006240!2.65e-09!41;UBERON:0002619!3.54e-09!22;UBERON:0003080!8.39e-09!42;UBERON:0002020!9.73e-09!34;UBERON:0003528!9.73e-09!34;UBERON:0002371!2.42e-08!80;UBERON:0001893!4.62e-08!34;UBERON:0001950!4.86e-08!20;UBERON:0001869!4.97e-08!32;UBERON:0002791!9.41e-08!33;UBERON:0000955!1.01e-07!69;UBERON:0006238!1.01e-07!69;UBERON:0002390!1.05e-07!102;UBERON:0003061!1.05e-07!102;UBERON:0001474!1.39e-07!86;UBERON:0002346!2.61e-07!90;UBERON:0003075!2.99e-07!86;UBERON:0007284!2.99e-07!86;UBERON:0001017!3.10e-07!82;UBERON:0000956!3.59e-07!25;UBERON:0000203!3.59e-07!25;UBERON:0002193!5.30e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.85e-09;22!UBERON:0000956;8.96e-08;25!UBERON:0000203;8.96e-08;25!UBERON:0001950;1.46e-07;20!UBERON:0002021;5.61e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002619;5.85e-09;22!UBERON:0000956;8.96e-08;25!UBERON:0000203;8.96e-08;25!UBERON:0001950;1.46e-07;20!UBERON:0002021;5.61e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.92e-09,114;UBERON:0002619,5.03e-09,22;UBERON:0000956,7.87e-08,25;UBERON:0000203,7.87e-08,25;UBERON:0001950,1.26e-07,20;UBERON:0000073,2.98e-07,53;UBERON:0002616,2.98e-07,53;UBERON:0002371,6.19e-07,76;UBERON:0002021,6.28e-07,5;UBERON:0002780,6.74e-07,41;UBERON:0001890,6.74e-07,41;UBERON:0003080,6.74e-07,41;UBERON:0006240,6.74e-07,41;UBERON:0001049,9.60e-07,56;UBERON:0005068,9.60e-07,56;UBERON:0006241,9.60e-07,56;UBERON:0007135,9.60e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0,0,0,0.157421562627358,0,0.383829398097213,0.928896739896456,0,0,0,0,0.142169232487422,0.293600439334847,1.66198622559563,0.601633342410425,1.30206522429511,0,0,0,1.01778767145695,0,0.727752183563449,0.697287110717054,0.411167888021826,1.23882548358041,0.575384784644301,0,0.709446689665756,1.72372840368309,0,4.06279459783025,0.941211697713023,0.272906150057846,0.224723484445085,1.53041946185451,0,1.27867425159808,0,0.398927315243264,0.426224750532694,1.45104619314292,0.56738522469114,1.24564449799115,1.00499466102697,1.0429658368404,0.434377689410233,1.81619850790011,0.368277635987565,0.632924774881769,0.211255286311942,0,0.419317291016752,0.22465726229299,0.150176892841506,0.32145117339416,1.14005097496499,0,0.730656615058536,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,1.1384259382189,0,0.764546456250458,0,0,0.526768169550154,0.786839080455332,1.96505381374582,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0,0,0.541607727530031,0.25618263945135,0.650296737799391,0.657751618414705,0.552700035571697,0.579606171470105,0.296573126324121,0.267540828089713,0,0.793165398882963,0,0.34362744548263,0,0,1.30216690771284,0,0,0.255973222308837,0,0,0,0,1.06976078313403,2.17236605824198,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.491337269247072,0.103325781175765,0,0,0,0,0,0.375355559615893,0,0,0.919463387397059,0,0,0,0,0.423863802319124,0,0,0.257640540045629,0,0.675105328965065,0,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.743155811443641,0.93733833986777,0,0,0.268675568108545,0,0.383382679165211,0.492663237895943,0.616339038092582,0.621984346622316,0.432359860250884,1.00993946741104,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0.87192013766656,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,0.788123040807709,0.646882724578552,2.05348858047597,0,1.30139853857622,0,0.167516265334349,0,0,2.99161459204025,0,0,0,0,0.415941723061614,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0.413536052245775,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0.460404944679482,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,1.97333888981341,1.0457418040996,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.275673144969061,0.214840489736547,0,0.255679882248303,0.0890320356467374,0,0,0.765676274967505,0.4046311234222,0,0,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.284567373393656,0.159426272728822,0.199579371432817,0.383010740264733,0.423347165447766,0.324621940274555,0.561594356226918,0.228234679033192,0,0,0.50787533340481,0.1605880751037,0.201799707191048,0,0,0.614481528616916,0,0.500547425135725,0,0,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0.334330152832435,0.284136146806413,0.23874448473769,0.593929361665277,0,0.994147647766298,1.96937182974718,0.222617410045812,0.824019371133798,2.95575571379191,0.796991953004279,1.38141957765574,0.251932747854276,0.20453736500431,0.123084805461069,0,0.0898683511473268,0.537063524026827,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0.260427761085233,0.437299999980979,0,0.1137934482855,0.254253650292766,0,1.37897349296586,0,0.347249989866585,0,0.844175070377856,1.52581736317083,0.995213339381022,1.18219047581419,0,0,0,0.538651809526579,0.227884111694002,0.23056390438806,0.179515288819544,0,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0.997270091400938,0,0.392125068635479,0,0,0.158936578980379,0,0.326465616318295,0,0.432777279484182,1.99052386215701,0.0884575645033392,0,0,0.123563938946503,0,0.134802265961354,0.802577647298789,0,0.182454789215666,0,0.242780379534093,1.18375320854817,4.83962864194656,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.293977192243133,0.0870592065804026,0.52418000472609,0,0,0.146178634172371,0.328461828212837,0,0.176512253383001,0,0,0.19871461170299,0.189932387867636,0.58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| ||
|short_description=p@chr14:55794660..55794664,+ | |short_description=p@chr14:55794660..55794664,+ | ||
}} | }} |
Latest revision as of 21:19, 24 July 2015
Short description: | p@chr14:55794660..55794664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:55794660..55794664, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.92e-09 | 114 |
regional part of cerebral cortex | 5.03e-09 | 22 |
cerebral cortex | 7.87e-08 | 25 |
pallium | 7.87e-08 | 25 |
neocortex | 1.26e-07 | 20 |
regional part of nervous system | 2.98e-07 | 53 |
regional part of brain | 2.98e-07 | 53 |
bone marrow | 6.19e-07 | 76 |
occipital lobe | 6.28e-07 | 5 |
regional part of forebrain | 6.74e-07 | 41 |
forebrain | 6.74e-07 | 41 |
anterior neural tube | 6.74e-07 | 41 |
future forebrain | 6.74e-07 | 41 |
neural tube | 9.60e-07 | 56 |
neural rod | 9.60e-07 | 56 |
future spinal cord | 9.60e-07 | 56 |
neural keel | 9.60e-07 | 56 |