FFCP PHASE1:Hg19::chr14:69199933..69199953,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:69199933..69199953,- to FFCP PHASE1:Hg19::chr14:69199933..69199953,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:69199933..69199953,- | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr14:69199933..69199953,- | |||
|id=chr14:69199933..69199953,- | |||
|ontology_enrichment_celltype=CL:0000094!1.74e-27!8;CL:0000738!7.21e-26!140;CL:0000081!7.64e-25!11;CL:0000988!3.31e-23!182;CL:0000037!1.23e-20!172;CL:0000566!1.23e-20!172;CL:0002032!1.82e-20!165;CL:0000837!1.82e-20!165;CL:0000766!2.98e-19!76;CL:0000763!3.85e-18!112;CL:0000049!3.85e-18!112;CL:0002057!1.99e-16!42;CL:0000860!4.51e-15!45;CL:0002087!2.73e-12!119;CL:0000453!2.77e-12!5;CL:0002031!1.46e-11!124;CL:0000775!2.59e-11!3;CL:0000767!4.64e-11!3;CL:0002009!1.63e-10!65;CL:0000080!5.33e-10!6;CL:0002194!1.74e-09!63;CL:0000576!1.74e-09!63;CL:0000040!1.74e-09!63;CL:0000559!1.74e-09!63;CL:0000557!2.60e-09!71;CL:0000771!1.41e-08!2;CL:0000839!3.38e-08!70;CL:0000990!8.57e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000453;3.26e-43;5!CL:0000771;6.20e-28;2!CL:0000990;3.28e-24;8!CL:0002393;2.86e-20;6!CL:0002397;2.86e-20;6!CL:0000451;7.06e-20;10!CL:0000081;1.15e-19;11!CL:0000094;9.70e-16;8!CL:0001014;5.55e-08;2!CL:0001016;5.55e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,4.05e-43,5;CL:0000771,5.41e-28,2;CL:0000990,3.70e-24,8;CL:0000451,7.78e-20,10;CL:0000081,1.04e-19,11;CL:0000094,8.56e-16,8;CL:0000988,3.07e-15,177;CL:0002393,1.00e-13,9;CL:0002397,1.00e-13,9;CL:0000738,1.38e-12,136;CL:0000763,4.03e-11,108;CL:0000049,4.03e-11,108;CL:0000037,6.28e-10,168;CL:0002032,1.14e-08,161;CL:0000837,1.14e-08,161;CL:0001014,5.74e-08,2;CL:0001016,5.74e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.55e-20!102;UBERON:0003061!6.55e-20!102;UBERON:0002193!1.70e-17!112;UBERON:0000178!1.26e-10!15;UBERON:0000179!1.26e-10!15;UBERON:0000463!1.26e-10!15;UBERON:0002371!6.27e-09!80;UBERON:0002405!2.76e-08!115;UBERON:0001474!4.93e-08!86;UBERON:0004177!2.19e-07!7;UBERON:0004765!3.97e-07!101;UBERON:0001434!3.97e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.62e-14;15!UBERON:0000179;2.62e-14;15!UBERON:0000463;2.62e-14;15!UBERON:0002331;1.75e-12;10!UBERON:0002390;5.37e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.76e-14,15;UBERON:0000179,2.76e-14,15;UBERON:0000463,2.76e-14,15;UBERON:0002331,1.68e-12,10;UBERON:0000358,1.68e-12,10;UBERON:0000307,1.68e-12,10;UBERON:0000091,1.68e-12,10;UBERON:0000087,1.68e-12,10;UBERON:0007010,1.68e-12,10;UBERON:0007806,1.68e-12,10;UBERON:0008780,1.68e-12,10;UBERON:0005728,1.68e-12,10;UBERON:0002390,1.01e-07,98;UBERON:0003061,1.01e-07,98;UBERON:0002193,6.12e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.57470412614962,0.865818594450472,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0,0,0,2.76997704265939,1.20326668482085,1.08505435357926,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0.47296445977717,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,3.58335422944858,1.98401704060365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69968669861801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.8201108093786,2.65729680626726,11.1224468093974,0,0,0,0.999936979274649,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.31037357147929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.57470412614962,0.865818594450472,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0,0,0,2.76997704265939,1.20326668482085,1.08505435357926,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0.47296445977717,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,3.58335422944858,1.98401704060365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69968669861801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.8201108093786,2.65729680626726,11.1224468093974,0,0,0,0.999936979274649,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.31037357147929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:69199933..69199953,- | |||
}} | }} |
Latest revision as of 22:11, 24 July 2015
Short description: | p@chr14:69199933..69199953, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:69199933..69199953, - |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 4.05e-43 | 5 |
eosinophil | 5.41e-28 | 2 |
conventional dendritic cell | 3.70e-24 | 8 |
dendritic cell | 7.78e-20 | 10 |
blood cell | 1.04e-19 | 11 |
granulocyte | 8.56e-16 | 8 |
hematopoietic cell | 3.07e-15 | 177 |
intermediate monocyte | 1.00e-13 | 9 |
CD14-positive, CD16-positive monocyte | 1.00e-13 | 9 |
leukocyte | 1.38e-12 | 136 |
myeloid cell | 4.03e-11 | 108 |
common myeloid progenitor | 4.03e-11 | 108 |
hematopoietic stem cell | 6.28e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.14e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-08 | 161 |
CD1a-positive Langerhans cell | 5.74e-08 | 2 |
immature CD1a-positive Langerhans cell | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.76e-14 | 15 |
haemolymphatic fluid | 2.76e-14 | 15 |
organism substance | 2.76e-14 | 15 |
umbilical cord | 1.68e-12 | 10 |
blastocyst | 1.68e-12 | 10 |
blastula | 1.68e-12 | 10 |
bilaminar disc | 1.68e-12 | 10 |
inner cell mass | 1.68e-12 | 10 |
cleaving embryo | 1.68e-12 | 10 |
connecting stalk | 1.68e-12 | 10 |
inner cell mass derived epiblast | 1.68e-12 | 10 |
extraembryonic mesoderm | 1.68e-12 | 10 |
hematopoietic system | 1.01e-07 | 98 |
blood island | 1.01e-07 | 98 |
hemolymphoid system | 6.12e-07 | 108 |