FFCP PHASE1:Hg19::chr14:87636652..87636657,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:87636652..87636657,-
|short_description=p@chr14:87636652..87636657,-
|description=CAGE_peak_at_chr14:87636652..87636657,-
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:87636652..87636657,- | |||
|coexpression_cluster_id=C789 | |||
|description=CAGE_peak_at_chr14:87636652..87636657,- | |||
|id=chr14:87636652..87636657,- | |||
|ontology_enrichment_celltype=CL:0002586!1.49e-11!3;CL:0000064!5.03e-11!3;CL:0005012!5.03e-11!3;CL:0000067!5.03e-11!3;CL:0002304!5.03e-11!3;CL:0000149!9.52e-09!4;CL:0000147!3.24e-08!14;CL:0002549!3.98e-08!2;CL:0000325!9.68e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.04e-54;3!CL:0000149;2.90e-41;4!CL:0002549;1.42e-36;2!CL:0000147;4.15e-21;14!CL:0000342;1.30e-19;1!CL:0002565;1.30e-19;1!CL:0000306;7.41e-19;4!CL:0002222;7.41e-19;4!CL:0002224;7.41e-19;4!CL:0000064;2.79e-07;3!CL:0000067;2.79e-07;3!CL:0005012;2.79e-07;3!CL:0002304;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.24e-55,3;CL:0000149,2.20e-41,4;CL:0002549,1.70e-36,2;CL:0000147,3.74e-21,14;CL:0000342,1.30e-19,1;CL:0002565,1.30e-19,1;CL:0000306,8.88e-19,4;CL:0002222,8.88e-19,4;CL:0002224,8.88e-19,4;CL:0000064,2.32e-07,3;CL:0000067,2.32e-07,3;CL:0005012,2.32e-07,3;CL:0002304,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.82e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.45e-36!86;UBERON:0007284!1.45e-36!86;UBERON:0002346!1.49e-34!90;UBERON:0005743!7.54e-27!86;UBERON:0003056!3.46e-26!61;UBERON:0007625!1.26e-24!11;UBERON:0000153!1.84e-24!129;UBERON:0007811!1.84e-24!129;UBERON:0000033!2.06e-24!123;UBERON:0000073!1.33e-23!94;UBERON:0001016!1.33e-23!94;UBERON:0002616!1.51e-21!59;UBERON:0007023!7.14e-21!115;UBERON:0004121!3.28e-20!169;UBERON:0001017!3.54e-20!82;UBERON:0001049!4.58e-20!57;UBERON:0005068!4.58e-20!57;UBERON:0006241!4.58e-20!57;UBERON:0007135!4.58e-20!57;UBERON:0000924!1.59e-19!173;UBERON:0006601!1.59e-19!173;UBERON:0000020!2.40e-19!23;UBERON:0000970!3.94e-19!20;UBERON:0000955!4.02e-19!69;UBERON:0006238!4.02e-19!69;UBERON:0001032!2.04e-18!24;UBERON:0004456!2.04e-18!24;UBERON:0002104!4.28e-18!21;UBERON:0000019!9.99e-17!19;UBERON:0000047!9.99e-17!19;UBERON:0004088!9.99e-17!19;UBERON:0003072!9.99e-17!19;UBERON:0003071!9.99e-17!19;UBERON:0004128!9.99e-17!19;UBERON:0001456!6.44e-15!21;UBERON:0000488!2.57e-14!4;UBERON:0001893!5.99e-14!34;UBERON:0002020!7.10e-14!34;UBERON:0003528!7.10e-14!34;UBERON:0002298!8.78e-14!8;UBERON:0002780!7.79e-13!41;UBERON:0001890!7.79e-13!41;UBERON:0006240!7.79e-13!41;UBERON:0003080!1.86e-12!42;UBERON:0002791!1.98e-12!33;UBERON:0000966!6.88e-12!5;UBERON:0005388!6.88e-12!5;UBERON:0001802!6.88e-12!5;UBERON:0001781!1.49e-11!3;UBERON:0001782!1.49e-11!3;UBERON:0005424!1.49e-11!3;UBERON:0002619!3.02e-11!22;UBERON:0001778!5.03e-11!3;UBERON:0001775!5.03e-11!3;UBERON:0002200!6.07e-11!11;UBERON:0006876!6.07e-11!11;UBERON:0000064!9.38e-11!219;UBERON:0001869!1.38e-10!32;UBERON:0005085!3.44e-10!29;UBERON:0006331!4.01e-10!3;UBERON:0001950!4.26e-10!20;UBERON:0000988!8.78e-10!3;UBERON:0000956!9.96e-10!25;UBERON:0000203!9.96e-10!25;UBERON:0002203!1.55e-09!6;UBERON:0001768!1.55e-09!6;UBERON:0003076!2.16e-09!15;UBERON:0003057!2.16e-09!15;UBERON:0004733!6.36e-09!12;UBERON:0002028!6.36e-09!12;UBERON:0007277!6.36e-09!12;UBERON:0000063!1.21e-08!97;UBERON:0001801!2.02e-08!14;UBERON:0004732!3.49e-08!13;UBERON:0003947!3.98e-08!2;UBERON:0005629!3.98e-08!2;UBERON:0005358!3.98e-08!2;UBERON:0001886!3.98e-08!2;UBERON:0004086!3.98e-08!2;UBERON:0005282!3.98e-08!2;UBERON:0005281!3.98e-08!2;UBERON:0000475!1.25e-07!365;UBERON:0000483!1.53e-07!309;UBERON:0000119!2.21e-07!312;UBERON:0002148!5.77e-07!2;UBERON:0009662!5.77e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.14e-79;11!UBERON:0000019;4.47e-60;19!UBERON:0000047;4.47e-60;19!UBERON:0004088;4.47e-60;19!UBERON:0010230;4.47e-60;19!UBERON:0000966;3.10e-58;5!UBERON:0005388;3.10e-58;5!UBERON:0001802;3.10e-58;5!UBERON:0000970;4.57e-57;20!UBERON:0001781;1.04e-54;3!UBERON:0001782;1.04e-54;3!UBERON:0002104;2.42e-54;21!UBERON:0001456;2.42e-54;21!UBERON:0000020;1.32e-49;23!UBERON:0001032;1.57e-47;24!UBERON:0004456;1.57e-47;24!UBERON:0005629;1.42e-36;2!UBERON:0005358;1.42e-36;2!UBERON:0001886;1.42e-36;2!UBERON:0004086;1.42e-36;2!UBERON:0005282;1.42e-36;2!UBERON:0005281;1.42e-36;2!UBERON:0010371;7.96e-27;31!UBERON:0006876;1.91e-26;11!UBERON:0001801;6.96e-21;14!UBERON:0002506;1.30e-19;1!UBERON:0001769;1.30e-19;1!UBERON:0000488;4.70e-19;4!UBERON:0010077;7.41e-19;4!UBERON:0005389;7.41e-19;4!UBERON:0000484;7.41e-19;4!UBERON:0000965;7.41e-19;4!UBERON:0001803;7.41e-19;4!UBERON:0001444;1.88e-16;48!UBERON:0000033;2.08e-15;50!UBERON:0005284;2.70e-15;5!UBERON:0002203;4.80e-13;6!UBERON:0001768;4.80e-13;6!UBERON:0002200;4.80e-13;6!UBERON:0000153;2.03e-12;54!UBERON:0007811;9.28e-11;52!UBERON:0001778;2.79e-07;3!UBERON:0001775;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.51e-79,11;UBERON:0000019,3.68e-57,20;UBERON:0000047,3.68e-57,20;UBERON:0010312,3.68e-57,20;UBERON:0004088,3.68e-57,20;UBERON:0010230,3.68e-57,20;UBERON:0003072,3.68e-57,20;UBERON:0004128,3.68e-57,20;UBERON:0003071,3.68e-57,20;UBERON:0001782,7.24e-55,3;UBERON:0005424,7.24e-55,3;UBERON:0000970,1.97e-54,21;UBERON:0002104,1.97e-54,21;UBERON:0001456,5.95e-52,22;UBERON:0000966,9.58e-49,6;UBERON:0005388,9.58e-49,6;UBERON:0001802,9.58e-49,6;UBERON:0000020,1.31e-47,24;UBERON:0001032,1.31e-47,24;UBERON:0004456,1.31e-47,24;UBERON:0001781,2.20e-41,4;UBERON:0005085,8.16e-37,31;UBERON:0005629,1.70e-36,2;UBERON:0005358,1.70e-36,2;UBERON:0001886,1.70e-36,2;UBERON:0004086,1.70e-36,2;UBERON:0005282,1.70e-36,2;UBERON:0005281,1.70e-36,2;UBERON:0006876,1.68e-26,11;UBERON:0001444,3.46e-23,49;UBERON:0001801,6.62e-21,14;UBERON:0000033,3.02e-20,56;UBERON:0002506,1.30e-19,1;UBERON:0001769,1.30e-19,1;UBERON:0000488,3.57e-19,4;UBERON:0010077,8.88e-19,4;UBERON:0005389,8.88e-19,4;UBERON:0000484,8.88e-19,4;UBERON:0002546,8.88e-19,4;UBERON:0000965,8.88e-19,4;UBERON:0001803,8.88e-19,4;UBERON:0003073,8.88e-19,4;UBERON:0005426,8.88e-19,4;UBERON:0000153,2.99e-18,62;UBERON:0007811,2.99e-18,62;UBERON:0003056,2.99e-18,61;UBERON:0005284,2.90e-15,5;UBERON:0003075,1.58e-13,82;UBERON:0007284,1.58e-13,82;UBERON:0002203,4.01e-13,6;UBERON:0001768,4.01e-13,6;UBERON:0002200,4.01e-13,6;UBERON:0002346,6.96e-13,86;UBERON:0010371,1.36e-10,104;UBERON:0000076,6.94e-10,8;UBERON:0004121,9.69e-10,171;UBERON:0000924,9.69e-10,171;UBERON:0006601,9.69e-10,171;UBERON:0010314,3.01e-08,132;UBERON:0001778,2.32e-07,3;UBERON:0001775,2.32e-07,3;UBERON:0001048,9.36e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,1.55210578223795,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36221684880438,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11762744716461,0,0,0,0,0,0,0,1.04337364477569,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53870075069834,6.88830755969382,2.60302715731442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0.1251909307065,0,0.443716206147409,0.124192805882767,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,8.43423221284545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.135982980381829,0,0,0,0,0,0,0,1.14028650910293,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0.560659312903067,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,1.55210578223795,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36221684880438,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11762744716461,0,0,0,0,0,0,0,1.04337364477569,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53870075069834,6.88830755969382,2.60302715731442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0.1251909307065,0,0.443716206147409,0.124192805882767,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,8.43423221284545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.135982980381829,0,0,0,0,0,0,0,1.14028650910293,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0.560659312903067,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:87636652..87636657,- | |||
}} | }} |
Latest revision as of 23:20, 24 July 2015
Short description: | p@chr14:87636652..87636657, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:87636652..87636657, - |
Coexpression cluster: | C789_retina_Retinal_medulla_stomach_lung_eye_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.24e-55 | 3 |
visual pigment cell | 2.20e-41 | 4 |
fibroblast of choroid plexus | 1.70e-36 | 2 |
pigment cell | 3.74e-21 | 14 |
pigment cell (sensu Vertebrata) | 1.30e-19 | 1 |
iris pigment epithelial cell | 1.30e-19 | 1 |
crystallin accumulating cell | 8.88e-19 | 4 |
vertebrate lens cell | 8.88e-19 | 4 |
lens epithelial cell | 8.88e-19 | 4 |
ciliated cell | 2.32e-07 | 3 |
ciliated epithelial cell | 2.32e-07 | 3 |
multi-ciliated epithelial cell | 2.32e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.32e-07 | 3 |