FFCP PHASE1:Hg19::chr15:33392420..33392425,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:33392420..33392425,- | |||
|description=CAGE_peak_at_chr15:33392420..33392425,- | |description=CAGE_peak_at_chr15:33392420..33392425,- | ||
|id=chr15:33392420..33392425,- | |id=chr15:33392420..33392425,- | ||
|ontology_enrichment_celltype=CL:0002194!2.50e-21!63;CL:0000576!2.50e-21!63;CL:0000040!2.50e-21!63;CL:0000559!2.50e-21!63;CL:0000839!1.39e-20!70;CL:0002009!2.46e-20!65;CL:0000557!3.92e-20!71;CL:0000766!2.48e-19!76;CL:0002057!5.64e-19!42;CL:0000860!3.75e-17!45;CL:0000763!1.03e-11!112;CL:0000049!1.03e-11!112;CL:0002087!1.36e-09!119;CL:0002031!8.80e-09!124;CL:0000738!2.51e-08!140 | |ontology_enrichment_celltype=CL:0002194!2.50e-21!63;CL:0000576!2.50e-21!63;CL:0000040!2.50e-21!63;CL:0000559!2.50e-21!63;CL:0000839!1.39e-20!70;CL:0002009!2.46e-20!65;CL:0000557!3.92e-20!71;CL:0000766!2.48e-19!76;CL:0002057!5.64e-19!42;CL:0000860!3.75e-17!45;CL:0000763!1.03e-11!112;CL:0000049!1.03e-11!112;CL:0002087!1.36e-09!119;CL:0002031!8.80e-09!124;CL:0000738!2.51e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.13e-26;3!CL:0000473;4.77e-14;39!CL:0000234;4.77e-14;39!CL:0000576;2.97e-13;48!CL:0000860;1.03e-10;33!CL:0002057;1.03e-10;33!CL:0000766;1.61e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,9.56e-27,3;CL:0002194,2.11e-21,59;CL:0000576,2.11e-21,59;CL:0000040,2.11e-21,59;CL:0000559,2.11e-21,59;CL:0002009,1.22e-20,61;CL:0000839,6.21e-19,66;CL:0000557,1.27e-18,67;CL:0000766,3.41e-17,72;CL:0000473,8.95e-16,48;CL:0000234,8.95e-16,48;CL:0000860,1.17e-11,42;CL:0002057,1.17e-11,42;CL:0000763,9.06e-11,108;CL:0000049,9.06e-11,108;CL:0002087,5.54e-10,115;CL:0002031,1.78e-09,120;CL:0000738,4.17e-08,136 | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.58e-12;3!UBERON:0005425;1.48e-09;1!CL:0002057;1.33e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.48e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.91e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.52e-20!57;UBERON:0005068!4.52e-20!57;UBERON:0006241!4.52e-20!57;UBERON:0007135!4.52e-20!57;UBERON:0007023!9.46e-18!115;UBERON:0002780!5.10e-17!41;UBERON:0001890!5.10e-17!41;UBERON:0006240!5.10e-17!41;UBERON:0002371!1.34e-16!80;UBERON:0003080!1.94e-16!42;UBERON:0002020!2.08e-16!34;UBERON:0003528!2.08e-16!34;UBERON:0001893!2.87e-16!34;UBERON:0002616!3.37e-16!59;UBERON:0000073!7.66e-16!94;UBERON:0001016!7.66e-16!94;UBERON:0000955!1.02e-15!69;UBERON:0006238!1.02e-15!69;UBERON:0001017!1.04e-15!82;UBERON:0005743!1.57e-15!86;UBERON:0002791!3.45e-15!33;UBERON:0002619!4.06e-15!22;UBERON:0001950!5.52e-15!20;UBERON:0003075!1.04e-14!86;UBERON:0007284!1.04e-14!86;UBERON:0001474!1.12e-14!86;UBERON:0002346!1.43e-14!90;UBERON:0001869!1.77e-14!32;UBERON:0002390!3.95e-13!102;UBERON:0003061!3.95e-13!102;UBERON:0000956!8.46e-13!25;UBERON:0000203!8.46e-13!25;UBERON:0004765!8.41e-12!101;UBERON:0001434!8.41e-12!101;UBERON:0002193!8.42e-12!112;UBERON:0002405!2.53e-11!115;UBERON:0003056!3.18e-11!61;UBERON:0000200!1.08e-09!6;UBERON:0002298!4.92e-08!8;UBERON:0000033!1.03e-07!123;UBERON:0000924!4.34e-07!173;UBERON:0006601!4.34e-07!173;UBERON:0004121!5.36e-07!169;UBERON:0000153!6.27e-07!129;UBERON:0007811!6.27e-07!129;UBERON:0000062!9.52e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.18e-10;20!UBERON:0000941;1.48e-09;1!UBERON:0001785;1.48e-09;1!UBERON:0002464;1.48e-09;1!UBERON:0004904;1.48e-09;1!UBERON:0001021;1.48e-09;1!UBERON:0002619;6.04e-09;22!UBERON:0000956;6.83e-08;25!UBERON:0000203;6.83e-08;25!UBERON:0002021;1.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.49e-16,76;UBERON:0001474,7.51e-15,82;UBERON:0004765,2.40e-13,90;UBERON:0002405,7.54e-13,93;UBERON:0002390,4.37e-12,98;UBERON:0003061,4.37e-12,98;UBERON:0001434,8.41e-12,100;UBERON:0002193,9.06e-11,108;UBERON:0001950,8.03e-10,20;UBERON:0000941,1.15e-09,1;UBERON:0001785,1.15e-09,1;UBERON:0002464,1.15e-09,1;UBERON:0004904,1.15e-09,1;UBERON:0001021,1.15e-09,1;UBERON:0003902,1.15e-09,1;UBERON:0005425,1.15e-09,1;UBERON:0002619,5.94e-09,22;UBERON:0000956,6.74e-08,25;UBERON:0000203,6.74e-08,25;UBERON:0002021,1.15e-07,5;UBERON:0003056,1.68e-07,61 | |||
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|short_description=p@chr15:33392420..33392425,- | |short_description=p@chr15:33392420..33392425,- | ||
}} | }} |
Latest revision as of 00:51, 25 July 2015
Short description: | p@chr15:33392420..33392425, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33392420..33392425, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 9.56e-27 | 3 |
monopoietic cell | 2.11e-21 | 59 |
monocyte | 2.11e-21 | 59 |
monoblast | 2.11e-21 | 59 |
promonocyte | 2.11e-21 | 59 |
macrophage dendritic cell progenitor | 1.22e-20 | 61 |
myeloid lineage restricted progenitor cell | 6.21e-19 | 66 |
granulocyte monocyte progenitor cell | 1.27e-18 | 67 |
myeloid leukocyte | 3.41e-17 | 72 |
defensive cell | 8.95e-16 | 48 |
phagocyte | 8.95e-16 | 48 |
classical monocyte | 1.17e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-11 | 42 |
myeloid cell | 9.06e-11 | 108 |
common myeloid progenitor | 9.06e-11 | 108 |
nongranular leukocyte | 5.54e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.78e-09 | 120 |
leukocyte | 4.17e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.49e-16 | 76 |
bone element | 7.51e-15 | 82 |
skeletal element | 2.40e-13 | 90 |
immune system | 7.54e-13 | 93 |
hematopoietic system | 4.37e-12 | 98 |
blood island | 4.37e-12 | 98 |
skeletal system | 8.41e-12 | 100 |
hemolymphoid system | 9.06e-11 | 108 |
neocortex | 8.03e-10 | 20 |
cranial nerve II | 1.15e-09 | 1 |
cranial nerve | 1.15e-09 | 1 |
nerve trunk | 1.15e-09 | 1 |
nerve connecting eye with brain | 1.15e-09 | 1 |
nerve | 1.15e-09 | 1 |
retinal neural layer | 1.15e-09 | 1 |
presumptive neural retina | 1.15e-09 | 1 |
regional part of cerebral cortex | 5.94e-09 | 22 |
cerebral cortex | 6.74e-08 | 25 |
pallium | 6.74e-08 | 25 |
occipital lobe | 1.15e-07 | 5 |
pre-chordal neural plate | 1.68e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.91e-09 | 1 |