FFCP PHASE1:Hg19::chr15:90579378..90579409,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:90579378..90579409,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr15:90579378..90579409,+ | |||
|id=chr15:90579378..90579409,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.58e-59!76;CL:0002057!9.26e-53!42;CL:0000860!8.11e-49!45;CL:0002194!1.28e-44!63;CL:0000576!1.28e-44!63;CL:0000040!1.28e-44!63;CL:0000559!1.28e-44!63;CL:0002009!4.76e-43!65;CL:0000839!1.68e-42!70;CL:0000557!8.32e-42!71;CL:0000763!2.09e-37!112;CL:0000049!2.09e-37!112;CL:0000738!4.61e-34!140;CL:0002393!1.16e-26!9;CL:0002397!1.16e-26!9;CL:0000037!4.29e-26!172;CL:0000566!4.29e-26!172;CL:0002032!7.91e-26!165;CL:0000837!7.91e-26!165;CL:0002087!9.99e-26!119;CL:0002031!2.68e-24!124;CL:0000988!3.55e-24!182;CL:0000094!5.73e-19!8;CL:0000775!1.21e-13!3;CL:0000081!1.36e-13!11;CL:0000875!2.18e-12!3;CL:0002396!2.18e-12!3;CL:0000771!9.33e-10!2;CL:0000134!1.18e-08!358;CL:0002320!2.56e-08!365;CL:0000219!3.83e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.52e-69;8!CL:0000081;3.85e-50;11!CL:0000775;7.55e-47;3!CL:0000771;3.35e-32;2!CL:0000860;8.04e-16;33!CL:0002057;8.04e-16;33!CL:0000766;2.64e-15;69!CL:0000473;6.50e-14;39!CL:0000234;6.50e-14;39!CL:0000763;3.78e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.82e-69,8;CL:0000081,3.54e-50,11;CL:0000775,7.56e-47,3;CL:0000771,3.35e-32,2;CL:0000766,4.61e-29,72;CL:0000763,3.79e-19,108;CL:0000049,3.79e-19,108;CL:0000738,5.07e-15,136;CL:0000860,9.23e-13,42;CL:0002057,9.23e-13,42;CL:0002032,1.56e-12,161;CL:0000837,1.56e-12,161;CL:0000037,5.74e-12,168;CL:0000988,2.64e-11,177;CL:0000473,3.87e-11,48;CL:0000234,3.87e-11,48;CL:0002194,7.33e-09,59;CL:0000576,7.33e-09,59;CL:0000040,7.33e-09,59;CL:0000559,7.33e-09,59;CL:0002009,1.44e-08,61;CL:0000839,6.61e-08,66;CL:0000557,8.72e-08,67 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.93e-16;1!CL:0002057;1.38e-08;42!CL:0000049;1.41e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.46e-36!80;UBERON:0002390!3.50e-36!102;UBERON:0003061!3.50e-36!102;UBERON:0001474!2.56e-33!86;UBERON:0002193!2.96e-32!112;UBERON:0004765!2.48e-27!101;UBERON:0001434!2.48e-27!101;UBERON:0002405!6.47e-25!115;UBERON:0002204!5.54e-15!167;UBERON:0003081!5.11e-14!216;UBERON:0002384!7.31e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.93e-16;1!UBERON:0001785;1.93e-16;1!UBERON:0002464;1.93e-16;1!UBERON:0004904;1.93e-16;1!UBERON:0001021;1.93e-16;1!UBERON:0003714;6.93e-09;2!UBERON:0005162;6.93e-09;2!UBERON:0000122;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.25e-16,1;UBERON:0001785,2.25e-16,1;UBERON:0002464,2.25e-16,1;UBERON:0004904,2.25e-16,1;UBERON:0001021,2.25e-16,1;UBERON:0003902,2.25e-16,1;UBERON:0005425,2.25e-16,1;UBERON:0003714,7.49e-09,2;UBERON:0005162,7.49e-09,2;UBERON:0000122,7.49e-09,2;UBERON:0002371,7.69e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0.223915474239924,0,0,0.436194716338694,0,0,0.929716147622738,0,1.85823822537062,0,0,0.945928919554341,1.03423704220986,1.29096936716765,4.06279459783025,0.376484679085209,0.272906150057846,0,1.53041946185451,0,1.91801137739712,0,0.199463657621632,0,0.580418477257168,0,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0.637812899895131,0.838634582033504,0.336985893439485,0.150176892841506,0.16072558669708,0.855038231223746,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.038279312852,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,8.98808428736619,5.9832291840805,15.7477895105693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:90579378..90579409,+ | |||
}} |
Latest revision as of 05:27, 25 July 2015
Short description: | p@chr15:90579378..90579409, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90579378..90579409, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.82e-69 | 8 |
blood cell | 3.54e-50 | 11 |
neutrophil | 7.56e-47 | 3 |
eosinophil | 3.35e-32 | 2 |
myeloid leukocyte | 4.61e-29 | 72 |
myeloid cell | 3.79e-19 | 108 |
common myeloid progenitor | 3.79e-19 | 108 |
leukocyte | 5.07e-15 | 136 |
classical monocyte | 9.23e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.23e-13 | 42 |
hematopoietic oligopotent progenitor cell | 1.56e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-12 | 161 |
hematopoietic stem cell | 5.74e-12 | 168 |
hematopoietic cell | 2.64e-11 | 177 |
defensive cell | 3.87e-11 | 48 |
phagocyte | 3.87e-11 | 48 |
monopoietic cell | 7.33e-09 | 59 |
monocyte | 7.33e-09 | 59 |
monoblast | 7.33e-09 | 59 |
promonocyte | 7.33e-09 | 59 |
macrophage dendritic cell progenitor | 1.44e-08 | 61 |
myeloid lineage restricted progenitor cell | 6.61e-08 | 66 |
granulocyte monocyte progenitor cell | 8.72e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.25e-16 | 1 |
cranial nerve | 2.25e-16 | 1 |
nerve trunk | 2.25e-16 | 1 |
nerve connecting eye with brain | 2.25e-16 | 1 |
nerve | 2.25e-16 | 1 |
retinal neural layer | 2.25e-16 | 1 |
presumptive neural retina | 2.25e-16 | 1 |
neural tissue | 7.49e-09 | 2 |
multi cell component structure | 7.49e-09 | 2 |
neuron projection bundle | 7.49e-09 | 2 |
bone marrow | 7.69e-07 | 76 |