FFCP PHASE1:Hg19::chr16:12852514..12852521,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:12852514..12852521,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_at_chr16:12852514..12852521,+ | |description=CAGE_peak_at_chr16:12852514..12852521,+ | ||
|id=chr16:12852514..12852521,+ | |id=chr16:12852514..12852521,+ | ||
|ontology_enrichment_celltype=CL:0002274!4.94e-40!5;CL:0000457!4.94e-40!5;CL:0002191!4.94e-40!5;CL:0000097!4.94e-40!5;CL:0000831!4.94e-40!5;CL:0002028!4.94e-40!5;CL:0000163!3.23e-22!9;CL:0000839!1.14e-07!70;CL:0000557!1.53e-07!71;CL:0000766!5.79e-07!76;CL:0002031!7.55e-07!124 | |ontology_enrichment_celltype=CL:0002274!4.94e-40!5;CL:0000457!4.94e-40!5;CL:0002191!4.94e-40!5;CL:0000097!4.94e-40!5;CL:0000831!4.94e-40!5;CL:0002028!4.94e-40!5;CL:0000163!3.23e-22!9;CL:0000839!1.14e-07!70;CL:0000557!1.53e-07!71;CL:0000766!5.79e-07!76;CL:0002031!7.55e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.03e-105;5!CL:0000163;6.42e-59;9!CL:0000151;6.14e-14;36!CL:0000766;3.08e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.03e-105,5;CL:0002028,3.03e-105,5;CL:0000163,6.42e-59,9;CL:0000151,2.65e-15,36;CL:0000839,8.53e-13,66;CL:0000557,1.30e-12,67;CL:0000766,8.79e-12,72;CL:0000763,5.03e-08,108;CL:0000049,5.03e-08,108;CL:0002031,2.91e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.09e-11!3;UBERON:0001033!3.09e-11!3;UBERON:0010056!3.09e-11!3;UBERON:0001154!2.82e-09!1;UBERON:0001153!2.82e-09!1;UBERON:0007029!3.05e-09!1;UBERON:0002135!4.19e-09!1;UBERON:0006834!8.49e-09!1;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0000013!5.48e-07!5;UBERON:0002410!5.48e-07!5 | |ontology_enrichment_uberon=UBERON:0001723!3.09e-11!3;UBERON:0001033!3.09e-11!3;UBERON:0010056!3.09e-11!3;UBERON:0001154!2.82e-09!1;UBERON:0001153!2.82e-09!1;UBERON:0007029!3.05e-09!1;UBERON:0002135!4.19e-09!1;UBERON:0006834!8.49e-09!1;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0000013!5.48e-07!5;UBERON:0002410!5.48e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.07e-17;2!UBERON:0002757;1.07e-17;2!UBERON:0010134;1.07e-17;2!UBERON:0005408;1.07e-17;2!UBERON:0001899;1.07e-17;2!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4!UBERON:0002784;1.57e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.07e-17,2;UBERON:0002757,1.07e-17,2;UBERON:0010134,1.07e-17,2;UBERON:0005408,1.07e-17,2;UBERON:0001899,1.07e-17,2;UBERON:0002371,3.41e-11,76;UBERON:0001474,2.04e-10,82;UBERON:0004765,1.55e-09,90;UBERON:0003296,1.57e-09,4;UBERON:0010133,1.57e-09,4;UBERON:0002784,1.57e-09,4;UBERON:0002405,3.03e-09,93;UBERON:0002390,8.48e-09,98;UBERON:0003061,8.48e-09,98;UBERON:0001434,1.24e-08,100;UBERON:0002193,5.03e-08,108 | |||
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|short_description=p@chr16:12852514..12852521,+ | |short_description=p@chr16:12852514..12852521,+ | ||
}} | }} |
Latest revision as of 06:20, 25 July 2015
Short description: | p@chr16:12852514..12852521, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:12852514..12852521, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.03e-105 | 5 |
basophil mast progenitor cell | 3.03e-105 | 5 |
endocrine cell | 6.42e-59 | 9 |
secretory cell | 2.65e-15 | 36 |
myeloid lineage restricted progenitor cell | 8.53e-13 | 66 |
granulocyte monocyte progenitor cell | 1.30e-12 | 67 |
myeloid leukocyte | 8.79e-12 | 72 |
myeloid cell | 5.03e-08 | 108 |
common myeloid progenitor | 5.03e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.91e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.07e-17 | 2 |
regional part of epithalamus | 1.07e-17 | 2 |
secretory circumventricular organ | 1.07e-17 | 2 |
circumventricular organ | 1.07e-17 | 2 |
epithalamus | 1.07e-17 | 2 |
bone marrow | 3.41e-11 | 76 |
bone element | 2.04e-10 | 82 |
skeletal element | 1.55e-09 | 90 |
gland of diencephalon | 1.57e-09 | 4 |
neuroendocrine gland | 1.57e-09 | 4 |
regional part of diencephalon | 1.57e-09 | 4 |
immune system | 3.03e-09 | 93 |
hematopoietic system | 8.48e-09 | 98 |
blood island | 8.48e-09 | 98 |
skeletal system | 1.24e-08 | 100 |
hemolymphoid system | 5.03e-08 | 108 |