FFCP PHASE1:Hg19::chr16:15502477..15502483,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:15502477..15502483,+ | |||
|coexpression_cluster_id=C3536 | |||
|description=CAGE_peak_at_chr16:15502477..15502483,+ | |description=CAGE_peak_at_chr16:15502477..15502483,+ | ||
|id=chr16:15502477..15502483,+ | |id=chr16:15502477..15502483,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.41e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.07e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.47e-25!115;UBERON:0001049!1.04e-23!57;UBERON:0005068!1.04e-23!57;UBERON:0006241!1.04e-23!57;UBERON:0007135!1.04e-23!57;UBERON:0005743!1.21e-23!86;UBERON:0000073!1.03e-22!94;UBERON:0001016!1.03e-22!94;UBERON:0002780!2.58e-22!41;UBERON:0001890!2.58e-22!41;UBERON:0006240!2.58e-22!41;UBERON:0001017!1.23e-21!82;UBERON:0003080!2.00e-21!42;UBERON:0002616!4.92e-20!59;UBERON:0000955!1.69e-19!69;UBERON:0006238!1.69e-19!69;UBERON:0002346!1.95e-19!90;UBERON:0001893!3.18e-19!34;UBERON:0002020!4.85e-19!34;UBERON:0003528!4.85e-19!34;UBERON:0003075!1.55e-18!86;UBERON:0007284!1.55e-18!86;UBERON:0002791!1.87e-18!33;UBERON:0001869!1.42e-17!32;UBERON:0003056!9.31e-17!61;UBERON:0000956!4.07e-14!25;UBERON:0000203!4.07e-14!25;UBERON:0002619!4.52e-13!22;UBERON:0001950!1.31e-11!20;UBERON:0000033!1.81e-11!123;UBERON:0000153!2.98e-11!129;UBERON:0007811!2.98e-11!129;UBERON:0000924!4.93e-10!173;UBERON:0006601!4.93e-10!173;UBERON:0004121!2.39e-09!169;UBERON:0000064!4.77e-09!219;UBERON:0000481!1.47e-08!347;UBERON:0000062!1.52e-08!511;UBERON:0000922!7.12e-08!612;UBERON:0000477!6.97e-07!286 | |ontology_enrichment_uberon=UBERON:0007023!2.47e-25!115;UBERON:0001049!1.04e-23!57;UBERON:0005068!1.04e-23!57;UBERON:0006241!1.04e-23!57;UBERON:0007135!1.04e-23!57;UBERON:0005743!1.21e-23!86;UBERON:0000073!1.03e-22!94;UBERON:0001016!1.03e-22!94;UBERON:0002780!2.58e-22!41;UBERON:0001890!2.58e-22!41;UBERON:0006240!2.58e-22!41;UBERON:0001017!1.23e-21!82;UBERON:0003080!2.00e-21!42;UBERON:0002616!4.92e-20!59;UBERON:0000955!1.69e-19!69;UBERON:0006238!1.69e-19!69;UBERON:0002346!1.95e-19!90;UBERON:0001893!3.18e-19!34;UBERON:0002020!4.85e-19!34;UBERON:0003528!4.85e-19!34;UBERON:0003075!1.55e-18!86;UBERON:0007284!1.55e-18!86;UBERON:0002791!1.87e-18!33;UBERON:0001869!1.42e-17!32;UBERON:0003056!9.31e-17!61;UBERON:0000956!4.07e-14!25;UBERON:0000203!4.07e-14!25;UBERON:0002619!4.52e-13!22;UBERON:0001950!1.31e-11!20;UBERON:0000033!1.81e-11!123;UBERON:0000153!2.98e-11!129;UBERON:0007811!2.98e-11!129;UBERON:0000924!4.93e-10!173;UBERON:0006601!4.93e-10!173;UBERON:0004121!2.39e-09!169;UBERON:0000064!4.77e-09!219;UBERON:0000481!1.47e-08!347;UBERON:0000062!1.52e-08!511;UBERON:0000922!7.12e-08!612;UBERON:0000477!6.97e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.26e-15;41!UBERON:0001890;3.26e-15;41!UBERON:0001893;1.31e-14;34!UBERON:0003528;3.03e-13;34!UBERON:0002020;3.03e-13;34!UBERON:0000073;8.36e-13;53!UBERON:0002616;8.36e-13;53!UBERON:0002791;6.62e-12;32!UBERON:0001869;7.85e-12;32!UBERON:0002619;5.31e-11;22!UBERON:0000200;1.07e-09;6!UBERON:0001950;1.08e-09;20!UBERON:0000956;1.55e-09;25!UBERON:0000203;1.55e-09;25!UBERON:0000955;3.58e-09;68!UBERON:0000007;6.69e-08;2!UBERON:0001017;1.40e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.15e-21,53;UBERON:0002616,3.15e-21,53;UBERON:0002780,2.72e-20,41;UBERON:0001890,2.72e-20,41;UBERON:0003080,2.72e-20,41;UBERON:0006240,2.72e-20,41;UBERON:0001049,7.64e-20,56;UBERON:0005068,7.64e-20,56;UBERON:0006241,7.64e-20,56;UBERON:0007135,7.64e-20,56;UBERON:0000955,7.27e-19,68;UBERON:0006238,7.27e-19,68;UBERON:0001017,1.00e-16,81;UBERON:0001893,1.55e-16,34;UBERON:0001016,1.58e-14,89;UBERON:0007023,1.96e-14,114;UBERON:0003528,3.21e-14,34;UBERON:0002020,3.21e-14,34;UBERON:0002346,3.78e-14,86;UBERON:0003056,4.01e-14,61;UBERON:0003075,1.50e-13,82;UBERON:0007284,1.50e-13,82;UBERON:0002791,5.72e-13,32;UBERON:0001869,7.83e-13,32;UBERON:0011216,2.00e-12,223;UBERON:0002619,4.19e-11,22;UBERON:0001950,1.02e-09,20;UBERON:0010371,1.17e-09,104;UBERON:0000200,1.20e-09,6;UBERON:0000956,1.26e-09,25;UBERON:0000203,1.26e-09,25;UBERON:0000007,1.80e-08,2;UBERON:0000025,8.23e-07,192 | |||
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| ||
|short_description=p@chr16:15502477..15502483,+ | |short_description=p@chr16:15502477..15502483,+ | ||
}} | }} |
Latest revision as of 06:30, 25 July 2015
Short description: | p@chr16:15502477..15502483, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:15502477..15502483, + |
Coexpression cluster: | C3536_hepatocellular_pancreas_Intestinal_skeletal_colon_Hepatocyte_gastric |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.07e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.15e-21 | 53 |
regional part of brain | 3.15e-21 | 53 |
regional part of forebrain | 2.72e-20 | 41 |
forebrain | 2.72e-20 | 41 |
anterior neural tube | 2.72e-20 | 41 |
future forebrain | 2.72e-20 | 41 |
neural tube | 7.64e-20 | 56 |
neural rod | 7.64e-20 | 56 |
future spinal cord | 7.64e-20 | 56 |
neural keel | 7.64e-20 | 56 |
brain | 7.27e-19 | 68 |
future brain | 7.27e-19 | 68 |
central nervous system | 1.00e-16 | 81 |
telencephalon | 1.55e-16 | 34 |
nervous system | 1.58e-14 | 89 |
adult organism | 1.96e-14 | 114 |
brain grey matter | 3.21e-14 | 34 |
gray matter | 3.21e-14 | 34 |
neurectoderm | 3.78e-14 | 86 |
pre-chordal neural plate | 4.01e-14 | 61 |
neural plate | 1.50e-13 | 82 |
presumptive neural plate | 1.50e-13 | 82 |
regional part of telencephalon | 5.72e-13 | 32 |
cerebral hemisphere | 7.83e-13 | 32 |
organ system subdivision | 2.00e-12 | 223 |
regional part of cerebral cortex | 4.19e-11 | 22 |
neocortex | 1.02e-09 | 20 |
ecto-epithelium | 1.17e-09 | 104 |
gyrus | 1.20e-09 | 6 |
cerebral cortex | 1.26e-09 | 25 |
pallium | 1.26e-09 | 25 |
pituitary gland | 1.80e-08 | 2 |
tube | 8.23e-07 | 192 |