FFCP PHASE1:Hg19::chr16:2569347..2569363,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2569347..2569363,+ | |||
|coexpression_cluster_id=C1758 | |||
|description=CAGE_peak_at_chr16:2569347..2569363,+ | |description=CAGE_peak_at_chr16:2569347..2569363,+ | ||
|id=chr16:2569347..2569363,+ | |id=chr16:2569347..2569363,+ | ||
|ontology_enrichment_celltype=CL:0000839!3.27e-15!70;CL:0000766!1.30e-14!76;CL:0002194!1.53e-14!63;CL:0000576!1.53e-14!63;CL:0000040!1.53e-14!63;CL:0000559!1.53e-14!63;CL:0000557!7.89e-14!71;CL:0002057!8.93e-14!42;CL:0002009!1.32e-13!65;CL:0000860!2.65e-12!45 | |ontology_enrichment_celltype=CL:0000839!3.27e-15!70;CL:0000766!1.30e-14!76;CL:0002194!1.53e-14!63;CL:0000576!1.53e-14!63;CL:0000040!1.53e-14!63;CL:0000559!1.53e-14!63;CL:0000557!7.89e-14!71;CL:0002057!8.93e-14!42;CL:0002009!1.32e-13!65;CL:0000860!2.65e-12!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.75e-15;39!CL:0000234;1.75e-15;39!CL:0000860;1.34e-14;33!CL:0002057;1.34e-14;33!CL:0000576;1.35e-10;48!CL:0000766;2.58e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.14e-20,48;CL:0000234,3.14e-20,48;CL:0000766,5.30e-19,72;CL:0000839,1.02e-18,66;CL:0002194,4.47e-18,59;CL:0000576,4.47e-18,59;CL:0000040,4.47e-18,59;CL:0000559,4.47e-18,59;CL:0000557,2.64e-17,67;CL:0002009,6.12e-17,61;CL:0000860,5.49e-16,42;CL:0002057,5.49e-16,42;CL:0000763,7.43e-08,108;CL:0000049,7.43e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.15e-11!80;UBERON:0002390!3.20e-10!102;UBERON:0003061!3.20e-10!102;UBERON:0002193!7.49e-10!112;UBERON:0001474!1.97e-09!86;UBERON:0002204!3.24e-08!167;UBERON:0000468!3.97e-08!659;UBERON:0002405!6.09e-08!115;UBERON:0004765!2.87e-07!101;UBERON:0001434!2.87e-07!101;UBERON:0000467!4.19e-07!625;UBERON:0007023!5.87e-07!115;UBERON:0000480!7.10e-07!626 | |ontology_enrichment_uberon=UBERON:0002371!2.15e-11!80;UBERON:0002390!3.20e-10!102;UBERON:0003061!3.20e-10!102;UBERON:0002193!7.49e-10!112;UBERON:0001474!1.97e-09!86;UBERON:0002204!3.24e-08!167;UBERON:0000468!3.97e-08!659;UBERON:0002405!6.09e-08!115;UBERON:0004765!2.87e-07!101;UBERON:0001434!2.87e-07!101;UBERON:0000467!4.19e-07!625;UBERON:0007023!5.87e-07!115;UBERON:0000480!7.10e-07!626 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.33e-15,76;UBERON:0002390,2.72e-14,98;UBERON:0003061,2.72e-14,98;UBERON:0002193,5.80e-14,108;UBERON:0001474,5.54e-13,82;UBERON:0002405,9.39e-12,93;UBERON:0004765,2.55e-11,90;UBERON:0003081,8.82e-10,203;UBERON:0001434,1.44e-09,100;UBERON:0002204,8.26e-09,167;UBERON:0000926,1.64e-08,315;UBERON:0004120,1.64e-08,315;UBERON:0006603,1.64e-08,315;UBERON:0000923,2.48e-07,560;UBERON:0010316,2.48e-07,560;UBERON:0005291,2.48e-07,560;UBERON:0006598,2.48e-07,560;UBERON:0010317,2.48e-07,560;UBERON:0002532,2.48e-07,560;UBERON:0002050,6.06e-07,564 | |||
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| ||
|short_description=p@chr16:2569347..2569363,+ | |short_description=p@chr16:2569347..2569363,+ | ||
}} | }} |
Latest revision as of 07:26, 25 July 2015
Short description: | p@chr16:2569347..2569363, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2569347..2569363, + |
Coexpression cluster: | C1758_Monocytederived_Neutrophils_medial_Whole_Smooth_leiomyoma_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.14e-20 | 48 |
phagocyte | 3.14e-20 | 48 |
myeloid leukocyte | 5.30e-19 | 72 |
myeloid lineage restricted progenitor cell | 1.02e-18 | 66 |
monopoietic cell | 4.47e-18 | 59 |
monocyte | 4.47e-18 | 59 |
monoblast | 4.47e-18 | 59 |
promonocyte | 4.47e-18 | 59 |
granulocyte monocyte progenitor cell | 2.64e-17 | 67 |
macrophage dendritic cell progenitor | 6.12e-17 | 61 |
classical monocyte | 5.49e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.49e-16 | 42 |
myeloid cell | 7.43e-08 | 108 |
common myeloid progenitor | 7.43e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.33e-15 | 76 |
hematopoietic system | 2.72e-14 | 98 |
blood island | 2.72e-14 | 98 |
hemolymphoid system | 5.80e-14 | 108 |
bone element | 5.54e-13 | 82 |
immune system | 9.39e-12 | 93 |
skeletal element | 2.55e-11 | 90 |
lateral plate mesoderm | 8.82e-10 | 203 |
skeletal system | 1.44e-09 | 100 |
musculoskeletal system | 8.26e-09 | 167 |
mesoderm | 1.64e-08 | 315 |
mesoderm-derived structure | 1.64e-08 | 315 |
presumptive mesoderm | 1.64e-08 | 315 |
germ layer | 2.48e-07 | 560 |
germ layer / neural crest | 2.48e-07 | 560 |
embryonic tissue | 2.48e-07 | 560 |
presumptive structure | 2.48e-07 | 560 |
germ layer / neural crest derived structure | 2.48e-07 | 560 |
epiblast (generic) | 2.48e-07 | 560 |
embryonic structure | 6.06e-07 | 564 |