FFCP PHASE1:Hg19::chr16:25842052..25842056,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:25842052..25842056,+
|short_description=p@chr16:25842052..25842056,+
|description=CAGE_peak_at_chr16:25842052..25842056,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:25842052..25842056,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr16:25842052..25842056,+ | |||
|id=chr16:25842052..25842056,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.27e-33;3!UBERON:0005425;7.62e-26;1 | |||
|ontology_enrichment_disease=DOID:171!9.21e-16!10;DOID:3095!4.82e-09!22;DOID:2994!4.82e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:171;8.67e-40;10!DOID:3095;1.99e-18;22!DOID:2994;1.99e-18;22!DOID:3193;1.21e-13;2!DOID:962;1.21e-13;2!DOID:1192;1.53e-09;3!DOID:3093;3.41e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.67e-40,10;DOID:3095,1.99e-18,22;DOID:2994,1.99e-18,22;DOID:3193,1.55e-13,2;DOID:962,1.55e-13,2;DOID:1192,1.81e-09,3;DOID:3093,3.85e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.99e-30!94;UBERON:0001016!4.99e-30!94;UBERON:0002780!3.85e-28!41;UBERON:0001890!3.85e-28!41;UBERON:0006240!3.85e-28!41;UBERON:0001017!8.90e-28!82;UBERON:0003080!2.19e-27!42;UBERON:0001893!5.80e-27!34;UBERON:0001049!7.62e-27!57;UBERON:0005068!7.62e-27!57;UBERON:0006241!7.62e-27!57;UBERON:0007135!7.62e-27!57;UBERON:0005743!3.14e-26!86;UBERON:0002346!2.00e-25!90;UBERON:0002791!1.77e-24!33;UBERON:0002020!9.03e-24!34;UBERON:0003528!9.03e-24!34;UBERON:0000955!2.96e-23!69;UBERON:0006238!2.96e-23!69;UBERON:0002616!4.07e-23!59;UBERON:0001869!7.73e-22!32;UBERON:0002619!3.27e-20!22;UBERON:0003056!5.14e-20!61;UBERON:0000924!5.80e-19!173;UBERON:0006601!5.80e-19!173;UBERON:0001950!1.77e-18!20;UBERON:0003075!4.01e-18!86;UBERON:0007284!4.01e-18!86;UBERON:0000956!1.29e-17!25;UBERON:0000203!1.29e-17!25;UBERON:0004121!5.94e-14!169;UBERON:0001872!8.58e-14!5;UBERON:0007023!1.38e-13!115;UBERON:0000033!2.83e-12!123;UBERON:0000153!1.80e-11!129;UBERON:0007811!1.80e-11!129;UBERON:0003714!3.42e-10!2;UBERON:0005162!1.87e-09!2;UBERON:0000122!1.87e-09!2;UBERON:0000349!3.91e-08!5;UBERON:0002420!9.34e-08!9;UBERON:0007245!9.34e-08!9;UBERON:0010009!9.34e-08!9;UBERON:0010011!9.34e-08!9;UBERON:0000454!9.34e-08!9;UBERON:0002308!1.33e-07!9;UBERON:0000125!1.33e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;5.53e-56;4!UBERON:0000923;5.53e-56;4!UBERON:0010316;5.53e-56;4!UBERON:0005291;5.53e-56;4!UBERON:0003714;8.49e-50;2!UBERON:0002050;5.44e-45;5!UBERON:0005423;5.44e-45;5!UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2!UBERON:0000010;6.16e-12;8!UBERON:0000922;2.42e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,1.09e-49,2;UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0000966,2.19e-17,6;UBERON:0005388,2.19e-17,6;UBERON:0001802,2.19e-17,6;UBERON:0005162,1.07e-13,2;UBERON:0000122,1.07e-13,2;UBERON:0000010,6.51e-12,8;UBERON:0002346,2.24e-10,86;UBERON:0001781,1.69e-07,4;UBERON:0004121,5.94e-07,171;UBERON:0000924,5.94e-07,171;UBERON:0006601,5.94e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,2.04123229368278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0.33946505990805,4.46407332213534,1.98297222814403,1.11728983594649,0,0,0,0,0,0.128458450192919,0,0.478901577171454,0,0.252071696221718,0,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,2.7348740450911,0,0,1.40696995487696,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,0,1.26410889386181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,2.04123229368278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0.33946505990805,4.46407332213534,1.98297222814403,1.11728983594649,0,0,0,0,0,0.128458450192919,0,0.478901577171454,0,0.252071696221718,0,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,2.7348740450911,0,0,1.40696995487696,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,0,1.26410889386181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:25842052..25842056,+ | |||
}} | }} |
Latest revision as of 07:27, 25 July 2015
Short description: | p@chr16:25842052..25842056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:25842052..25842056, + |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.09e-49 | 2 |
cranial nerve II | 5.93e-26 | 1 |
cranial nerve | 5.93e-26 | 1 |
nerve trunk | 5.93e-26 | 1 |
nerve connecting eye with brain | 5.93e-26 | 1 |
nerve | 5.93e-26 | 1 |
retinal neural layer | 5.93e-26 | 1 |
presumptive neural retina | 5.93e-26 | 1 |
retina | 2.19e-17 | 6 |
photoreceptor array | 2.19e-17 | 6 |
posterior segment of eyeball | 2.19e-17 | 6 |
multi cell component structure | 1.07e-13 | 2 |
neuron projection bundle | 1.07e-13 | 2 |
peripheral nervous system | 6.51e-12 | 8 |
neurectoderm | 2.24e-10 | 86 |
layer of retina | 1.69e-07 | 4 |
ectoderm-derived structure | 5.94e-07 | 171 |
ectoderm | 5.94e-07 | 171 |
presumptive ectoderm | 5.94e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.67e-40 | 10 |
germ cell and embryonal cancer | 1.99e-18 | 22 |
germ cell cancer | 1.99e-18 | 22 |
peripheral nerve sheath neoplasm | 1.55e-13 | 2 |
neurofibroma | 1.55e-13 | 2 |
peripheral nervous system neoplasm | 1.81e-09 | 3 |
nervous system cancer | 3.85e-09 | 11 |