FFCP PHASE1:Hg19::chr16:55539416..55539427,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:55539416..55539427,+ | |||
|description=CAGE_peak_at_chr16:55539416..55539427,+ | |||
|id=chr16:55539416..55539427,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.85e-22!180;CL:0000192!1.71e-13!42;CL:0000514!1.71e-13!42;CL:0000187!1.04e-12!54;CL:0000183!1.71e-12!59;CL:0000680!2.52e-12!57;CL:0000056!2.52e-12!57;CL:0000355!2.52e-12!57;CL:0000393!3.40e-11!60;CL:0000211!3.40e-11!60;CL:0000057!1.29e-09!75;CL:0000359!1.71e-09!32;CL:0000327!2.26e-08!14;CL:0000499!3.75e-08!27;CL:0002494!1.37e-07!16;CL:0000222!3.80e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000632;4.15e-11;3!CL:0000327;2.79e-10;15!CL:0002600;7.64e-08;2!CL:0002598;2.37e-07;2!CL:0000192;2.58e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,4.27e-11,3;CL:0000327,2.91e-10,15;CL:0000192,7.40e-10,43;CL:0000514,7.40e-10,43;CL:0000187,8.23e-10,55;CL:0000680,3.95e-09,58;CL:0000056,3.95e-09,58;CL:0000355,3.95e-09,58;CL:0000393,1.62e-08,61;CL:0000211,1.62e-08,61;CL:0002600,1.01e-07,2;CL:0002598,2.38e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;2.58e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.71e-14!84;UBERON:0001134!1.53e-13!61;UBERON:0002036!1.53e-13!61;UBERON:0003082!1.53e-13!61;UBERON:0002385!1.65e-13!63;UBERON:0001015!1.65e-13!63;UBERON:0000383!1.65e-13!63;UBERON:0000914!1.82e-12!83;UBERON:0002329!1.82e-12!83;UBERON:0003077!1.82e-12!83;UBERON:0003059!1.82e-12!83;UBERON:0007282!1.82e-12!83;UBERON:0009618!1.82e-12!83;UBERON:0007285!1.82e-12!83;UBERON:0003914!2.73e-12!118;UBERON:0004290!5.33e-12!70;UBERON:0000948!6.75e-12!24;UBERON:0005498!6.75e-12!24;UBERON:0004140!6.75e-12!24;UBERON:0009881!6.75e-12!24;UBERON:0004141!6.75e-12!24;UBERON:0003084!6.75e-12!24;UBERON:0007005!6.75e-12!24;UBERON:0004139!6.75e-12!24;UBERON:0004291!6.75e-12!24;UBERON:0005256!7.02e-12!143;UBERON:0001637!1.68e-11!42;UBERON:0003509!1.68e-11!42;UBERON:0004572!1.68e-11!42;UBERON:0000486!2.72e-11!82;UBERON:0001981!3.59e-11!60;UBERON:0007500!3.59e-11!60;UBERON:0004537!3.59e-11!60;UBERON:0006965!3.59e-11!60;UBERON:0007100!5.02e-11!27;UBERON:0000490!7.32e-11!138;UBERON:0004535!1.52e-10!110;UBERON:0001009!1.87e-10!113;UBERON:0002049!5.03e-10!79;UBERON:0007798!5.03e-10!79;UBERON:0000055!4.58e-09!69;UBERON:0002100!1.51e-08!216;UBERON:0004573!5.75e-08!33;UBERON:0004571!5.75e-08!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.81e-11;3!UBERON:0002081;9.84e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.04e-11,3;UBERON:0001134,1.16e-09,62;UBERON:0002036,1.16e-09,62;UBERON:0003082,1.16e-09,62;UBERON:0005256,1.57e-09,122;UBERON:0002385,3.02e-09,64;UBERON:0001015,3.02e-09,64;UBERON:0000383,3.02e-09,64;UBERON:0002329,3.42e-09,71;UBERON:0003059,3.42e-09,71;UBERON:0007282,3.42e-09,71;UBERON:0004290,3.42e-09,71;UBERON:0009618,3.42e-09,71;UBERON:0007503,3.52e-09,78;UBERON:0003077,5.19e-09,72;UBERON:0007285,5.19e-09,72;UBERON:0007524,7.79e-09,73;UBERON:0000486,1.97e-08,83;UBERON:0002081,7.96e-08,2;UBERON:0010227,7.96e-08,2;UBERON:0000948,9.73e-08,24;UBERON:0005498,9.73e-08,24;UBERON:0004140,9.73e-08,24;UBERON:0009881,9.73e-08,24;UBERON:0004141,9.73e-08,24;UBERON:0003084,9.73e-08,24;UBERON:0007005,9.73e-08,24;UBERON:0004139,9.73e-08,24;UBERON:0004291,9.73e-08,24;UBERON:0003104,1.81e-07,160;UBERON:0009142,1.81e-07,160;UBERON:0002100,1.94e-07,199;UBERON:0007100,9.92e-07,27 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,1.34088328328186,0,0,0,0.261185628199839,0,0,0.436882744260345,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,1.46062018077475,2.43966399395253,1.10808952269109,1.83600622119828,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0.722878304769133,1.00267582127178,0.434539556882471,1.5905718941022,3.89307896242109,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.38856200643038,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.529636723252875,0.860509862246441,0,2.24271040056923,0,1.2333377420858,0.622422070799533,0,0,1.81628913173918,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,3.56400857184616,1.7308685049499,0.910161361938026,0,0,0,0,0.438977620880838,0.919463387397059,1.50238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0,0.309157587715317,0,0,0.506328996723799,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,2.057870056657,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.797814349754612,1.04007436911366,0.257207374262142,1.41849132023278,0,0.285955987316295,2.17048642156577,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.157702415033935,0.468565659970853,0.300946099727719,0,0,0,0.368738337083406,0.260650843404249,0.195801157462741,2.05886054286514,0,0,0,0,0,0,0.248107807818777,0.61384789315225,1.40330047216537,0.384417447767103,1.02341449813341,0.321707842287215,0,0,0.532685175939381,0.164254312027618,1.03850885836724,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0.917870904715969,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0.94443704049192,0.6970372701606,0,0,1.73986598415015,0.74129687641568,0,0,0.316379424718726,1.33441135746677,1.535386747868,1.28381696410176,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0.202182481573316,1.58510321173008,0.842516912477962,0.975267478179181,0.487426979262569,0,0,0.707027159768564,1.13008116620243,1.65409603063837,0,0,3.47265320560013,1.31178950409327,1.01455188481352,0.30982349809975,0.281695602532241,0,0.0982490410131212,1.426684205925,0.709522128141196,0.844430541190656,2.63435914367922,0,1.04980416073495,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0.102268682502155,0,0,0,0,0,3.45251919729268,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0.179515288819544,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,2.23074737923365,0,0.451961481561065,0,0.19871461170299,0,0,0.400794101257669,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0.837847203816763,0.458320848023367,1.43574604915363,0,0,0.446342914883745,0,4.32359860250884,0,0,0,0,0,0,0,0,0.643012593860077,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,2.85878130549347,7.94510364438518,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,1.60181118851542,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0.285465333544967,0,0,0,0.149254802886874,0.467426619694449,0,0.568209015825267,0.754703705257725,0.889811221596536,0.915360273587694,0.151230923763239,0.310874401165561,0.443565449968902,0,0.899606224327209,0.310525913752519,0,0.265841714557995,0,0.450772826991655,0.380805212168795,0,0.181848659202559,0,1.39210127963548,0,0,7.21130980883865,5.38799182025471,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,1.0085253435176,0.781514011233092,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0.336283722218824,0,0,0.620916591138472,0,1.54339208493677,0,0,0,0,0.706437835654626,0,0,0,0,0,0.0714765441766563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| |||
|short_description=p@chr16:55539416..55539427,+ | |||
}} |
Latest revision as of 09:53, 25 July 2015
Short description: | p@chr16:55539416..55539427, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55539416..55539427, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 4.27e-11 | 3 |
extracellular matrix secreting cell | 2.91e-10 | 15 |
smooth muscle cell | 7.40e-10 | 43 |
smooth muscle myoblast | 7.40e-10 | 43 |
muscle cell | 8.23e-10 | 55 |
muscle precursor cell | 3.95e-09 | 58 |
myoblast | 3.95e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.95e-09 | 58 |
electrically responsive cell | 1.62e-08 | 61 |
electrically active cell | 1.62e-08 | 61 |
smooth muscle cell of trachea | 1.01e-07 | 2 |
bronchial smooth muscle cell | 2.38e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 3.04e-11 | 3 |
skeletal muscle tissue | 1.16e-09 | 62 |
striated muscle tissue | 1.16e-09 | 62 |
myotome | 1.16e-09 | 62 |
trunk mesenchyme | 1.57e-09 | 122 |
muscle tissue | 3.02e-09 | 64 |
musculature | 3.02e-09 | 64 |
musculature of body | 3.02e-09 | 64 |
somite | 3.42e-09 | 71 |
presomitic mesoderm | 3.42e-09 | 71 |
presumptive segmental plate | 3.42e-09 | 71 |
dermomyotome | 3.42e-09 | 71 |
trunk paraxial mesoderm | 3.42e-09 | 71 |
epithelial vesicle | 3.52e-09 | 78 |
paraxial mesoderm | 5.19e-09 | 72 |
presumptive paraxial mesoderm | 5.19e-09 | 72 |
dense mesenchyme tissue | 7.79e-09 | 73 |
multilaminar epithelium | 1.97e-08 | 83 |
cardiac atrium | 7.96e-08 | 2 |
future cardiac atrium | 7.96e-08 | 2 |
heart | 9.73e-08 | 24 |
primitive heart tube | 9.73e-08 | 24 |
primary heart field | 9.73e-08 | 24 |
anterior lateral plate mesoderm | 9.73e-08 | 24 |
heart tube | 9.73e-08 | 24 |
heart primordium | 9.73e-08 | 24 |
cardiac mesoderm | 9.73e-08 | 24 |
cardiogenic plate | 9.73e-08 | 24 |
heart rudiment | 9.73e-08 | 24 |
mesenchyme | 1.81e-07 | 160 |
entire embryonic mesenchyme | 1.81e-07 | 160 |
trunk | 1.94e-07 | 199 |
primary circulatory organ | 9.92e-07 | 27 |