FFCP PHASE1:Hg19::chr16:57680795..57680808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:57680795..57680808,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr16:57680795..57680808,+ | |||
|id=chr16:57680795..57680808,+ | |||
|ontology_enrichment_celltype=CL:0000625!7.79e-27!11;CL:0000791!1.31e-24!18;CL:0000789!1.31e-24!18;CL:0002420!1.31e-24!18;CL:0002419!1.31e-24!18;CL:0000790!1.31e-24!18;CL:0000084!1.23e-16!25;CL:0000827!1.23e-16!25;CL:0000838!3.09e-11!52;CL:0000542!6.20e-11!53;CL:0000051!6.20e-11!53;CL:0000623!3.87e-09!3;CL:0000825!3.87e-09!3;CL:0000767!6.46e-09!3;CL:0000738!7.03e-09!140;CL:0000842!8.12e-09!3;CL:0002087!4.25e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.26e-62;11!CL:0000791;2.37e-37;18!CL:0000789;2.37e-37;18!CL:0002419;2.37e-37;18!CL:0000084;2.50e-26;25!CL:0000623;1.08e-19;3!CL:0000767;3.45e-19;3!CL:0000226;6.34e-19;3!CL:0000842;6.34e-19;3!CL:0000542;6.22e-10;53!CL:0002393;2.32e-09;6!CL:0002397;2.32e-09;6!CL:0000094;1.72e-07;8!CL:0002087;6.31e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.26e-62,11;CL:0000791,2.37e-37,18;CL:0000789,2.37e-37,18;CL:0002420,2.37e-37,18;CL:0002419,2.37e-37,18;CL:0000790,2.37e-37,18;CL:0000084,2.50e-26,25;CL:0000827,2.50e-26,25;CL:0000623,1.08e-19,3;CL:0000825,1.08e-19,3;CL:0000838,1.40e-19,52;CL:0000767,3.67e-19,3;CL:0000542,3.72e-19,53;CL:0000051,3.72e-19,53;CL:0000226,6.34e-19,3;CL:0000842,6.34e-19,3;CL:0000738,2.46e-18,136;CL:0002087,2.60e-16,115;CL:0000037,5.90e-14,168;CL:0000988,5.23e-13,177;CL:0002031,1.33e-10,120;CL:0002032,1.62e-10,161;CL:0000837,1.62e-10,161;CL:0000094,1.76e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;2.37e-37;18!CL:0000051;6.22e-10;53!UBERON:0005425;6.77e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.84e-23!15;UBERON:0000179!7.84e-23!15;UBERON:0000463!7.84e-23!15;UBERON:0007023!1.22e-12!115;UBERON:0002193!5.59e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-54;15!UBERON:0000179;2.41e-54;15!UBERON:0000463;2.41e-54;15!UBERON:0002390;4.14e-23;32!UBERON:0002193;3.89e-13;42!UBERON:0000941;6.77e-07;1!UBERON:0001785;6.77e-07;1!UBERON:0002464;6.77e-07;1!UBERON:0004904;6.77e-07;1!UBERON:0001021;6.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.41e-54,15;UBERON:0000179,2.41e-54,15;UBERON:0000463,2.41e-54,15;UBERON:0002390,2.67e-10,98;UBERON:0003061,2.67e-10,98;UBERON:0002193,4.43e-09,108;UBERON:0000941,6.57e-07,1;UBERON:0001785,6.57e-07,1;UBERON:0002464,6.57e-07,1;UBERON:0004904,6.57e-07,1;UBERON:0001021,6.57e-07,1;UBERON:0003902,6.57e-07,1;UBERON:0005425,6.57e-07,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0141997517693,8.06041736004147,7.58599004248772,0,0,0,0,0,0,1.66198622559563,5.21415563422368,7.59538047505481,0.447830948479849,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,2.86708872891687,3.25541726928209,2.85135613334512,6.47473012034423,6.14335733541208,4.99722906209383,4.2619905367923,4.10563998460523,9.67712367478716,10.9650480271238,6.95157138637435,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,31.7219523925103,28.6784674563158,29.0055261992231,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40980880980951,6.90285442619574,12.5938518208064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,4.56702848308952,7.64637207142375,5.12682468456746,6.4322579373603,4.11362273086194,1.29694662238543,4.86028293514303,9.51750211553125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,1.28144895081234,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0.751871343838829,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr16:57680795..57680808,+ | |||
}} | }} |
Latest revision as of 10:38, 25 July 2015
Short description: | p@chr16:57680795..57680808, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57680795..57680808, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.26e-62 | 11 |
mature alpha-beta T cell | 2.37e-37 | 18 |
alpha-beta T cell | 2.37e-37 | 18 |
immature T cell | 2.37e-37 | 18 |
mature T cell | 2.37e-37 | 18 |
immature alpha-beta T cell | 2.37e-37 | 18 |
T cell | 2.50e-26 | 25 |
pro-T cell | 2.50e-26 | 25 |
natural killer cell | 1.08e-19 | 3 |
pro-NK cell | 1.08e-19 | 3 |
lymphoid lineage restricted progenitor cell | 1.40e-19 | 52 |
basophil | 3.67e-19 | 3 |
lymphocyte | 3.72e-19 | 53 |
common lymphoid progenitor | 3.72e-19 | 53 |
single nucleate cell | 6.34e-19 | 3 |
mononuclear cell | 6.34e-19 | 3 |
leukocyte | 2.46e-18 | 136 |
nongranular leukocyte | 2.60e-16 | 115 |
hematopoietic stem cell | 5.90e-14 | 168 |
hematopoietic cell | 5.23e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 1.33e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.62e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-10 | 161 |
granulocyte | 1.76e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 2.41e-54 | 15 |
haemolymphatic fluid | 2.41e-54 | 15 |
organism substance | 2.41e-54 | 15 |
hematopoietic system | 2.67e-10 | 98 |
blood island | 2.67e-10 | 98 |
hemolymphoid system | 4.43e-09 | 108 |
cranial nerve II | 6.57e-07 | 1 |
cranial nerve | 6.57e-07 | 1 |
nerve trunk | 6.57e-07 | 1 |
nerve connecting eye with brain | 6.57e-07 | 1 |
nerve | 6.57e-07 | 1 |
retinal neural layer | 6.57e-07 | 1 |
presumptive neural retina | 6.57e-07 | 1 |