FFCP PHASE1:Hg19::chr17:39775895..39775909,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_CU687211_5end | |association_with_transcript=48bp_to_CU687211_5end | ||
|cluster_id=chr17:39775895..39775909,+ | |||
|coexpression_cluster_id=C1170 | |coexpression_cluster_id=C1170 | ||
|description=CAGE_peak_1_at_CU687211_5end | |description=CAGE_peak_1_at_CU687211_5end | ||
|id=chr17:39775895..39775909,+ | |id=chr17:39775895..39775909,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.62e-29!254;CL:0002076!1.82e-24!43;CL:0002368!5.28e-19!13;CL:0000223!3.30e-17!59;CL:0002159!3.19e-15!13;CL:0002202!1.23e-11!9;CL:0002632!1.23e-11!9;CL:0002251!2.03e-11!21;CL:0000622!5.36e-10!5;CL:0000244!1.06e-09!4;CL:0000731!1.06e-09!4;CL:0000154!2.94e-08!6;CL:0002077!3.34e-08!33;CL:0000349!6.09e-08!3;CL:0002577!6.09e-08!3;CL:0002328!8.48e-08!3;CL:0000068!1.81e-07!3;CL:0000069!1.81e-07!3;CL:0000307!1.81e-07!3;CL:0000377!1.81e-07!3;CL:0002621!2.15e-07!3;CL:0002166!2.82e-07!3 | |ontology_enrichment_celltype=CL:0000066!8.62e-29!254;CL:0002076!1.82e-24!43;CL:0002368!5.28e-19!13;CL:0000223!3.30e-17!59;CL:0002159!3.19e-15!13;CL:0002202!1.23e-11!9;CL:0002632!1.23e-11!9;CL:0002251!2.03e-11!21;CL:0000622!5.36e-10!5;CL:0000244!1.06e-09!4;CL:0000731!1.06e-09!4;CL:0000154!2.94e-08!6;CL:0002077!3.34e-08!33;CL:0000349!6.09e-08!3;CL:0002577!6.09e-08!3;CL:0002328!8.48e-08!3;CL:0000068!1.81e-07!3;CL:0000069!1.81e-07!3;CL:0000307!1.81e-07!3;CL:0000377!1.81e-07!3;CL:0002621!2.15e-07!3;CL:0002166!2.82e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;9.29e-36;13!CL:0002076;3.13e-24;42!CL:0002159;1.11e-21;14!CL:0002202;1.58e-21;9!CL:0002632;1.58e-21;9!CL:0000244;4.07e-17;4!CL:0000731;4.07e-17;4!CL:0002577;9.89e-14;3!CL:0002328;1.78e-13;3!CL:0002621;7.53e-13;3!CL:0000307;7.85e-13;3!CL:0002166;1.98e-12;3!CL:0000240;6.95e-11;6!CL:0000311;6.95e-11;6!CL:0000079;6.95e-11;6!CL:0000237;6.95e-11;6!CL:0002077;1.30e-10;34!CL:0002327;2.30e-10;4!CL:0000575;2.10e-09;2!CL:0000312;6.86e-08;5!CL:0000362;2.82e-07;9!CL:0002251;9.24e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,8.55e-36,13;CL:0002076,2.49e-30,42;CL:0000066,2.10e-26,253;CL:0002159,7.00e-22,14;CL:0002202,1.46e-21,9;CL:0002632,1.46e-21,9;CL:0000223,1.11e-20,58;CL:0000244,3.83e-17,4;CL:0000731,3.83e-17,4;CL:0002577,8.91e-14,3;CL:0002328,1.67e-13,3;CL:0000068,7.09e-13,3;CL:0000069,7.09e-13,3;CL:0000307,7.09e-13,3;CL:0000377,7.09e-13,3;CL:0002621,9.82e-13,3;CL:0002166,1.66e-12,3;CL:0002077,2.22e-12,34;CL:0000240,6.69e-11,6;CL:0000311,6.69e-11,6;CL:0000079,6.69e-11,6;CL:0000237,6.69e-11,6;CL:0000036,6.69e-11,6;CL:0000357,6.69e-11,6;CL:0000114,6.69e-11,6;CL:0002327,2.27e-10,4;CL:0000575,1.67e-09,2;CL:0002321,2.87e-08,250;CL:0000312,6.54e-08,5;CL:0000362,2.44e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;7.85e-13;3!CL:0000223;1.53e-12;58!CL:0000357;6.95e-11;6!CL:0000114;6.95e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!9.39e-08!14 | |ontology_enrichment_disease=DOID:1749!9.39e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.22e-28!72;UBERON:0000065!1.01e-22!53;UBERON:0004119!1.13e-21!169;UBERON:0000925!1.13e-21!169;UBERON:0006595!1.13e-21!169;UBERON:0000072!2.56e-17!46;UBERON:0001557!4.76e-17!19;UBERON:0001737!8.83e-17!9;UBERON:0005631!6.70e-16!14;UBERON:0000158!6.70e-16!14;UBERON:0008947!9.20e-15!38;UBERON:0003258!9.20e-15!38;UBERON:0000077!7.18e-13!130;UBERON:0001007!1.12e-12!155;UBERON:0001555!1.12e-12!155;UBERON:0007026!1.12e-12!155;UBERON:0001041!4.99e-12!98;UBERON:0000166!3.71e-11!21;UBERON:0003124!9.89e-11!7;UBERON:0000064!1.03e-09!219;UBERON:0004921!2.69e-09!129;UBERON:0004185!2.69e-09!129;UBERON:0000165!3.60e-09!28;UBERON:0000930!3.60e-09!28;UBERON:0007196!8.16e-09!14;UBERON:0001558!8.16e-09!14;UBERON:0000478!3.49e-08!24;UBERON:0000161!4.25e-08!35;UBERON:0004815!8.48e-08!3;UBERON:0002031!8.48e-08!3;UBERON:0000365!1.01e-07!5;UBERON:0000062!1.65e-07!511;UBERON:0001949!2.15e-07!3;UBERON:0000305!5.01e-07!7 | |ontology_enrichment_uberon=UBERON:0001004!1.22e-28!72;UBERON:0000065!1.01e-22!53;UBERON:0004119!1.13e-21!169;UBERON:0000925!1.13e-21!169;UBERON:0006595!1.13e-21!169;UBERON:0000072!2.56e-17!46;UBERON:0001557!4.76e-17!19;UBERON:0001737!8.83e-17!9;UBERON:0005631!6.70e-16!14;UBERON:0000158!6.70e-16!14;UBERON:0008947!9.20e-15!38;UBERON:0003258!9.20e-15!38;UBERON:0000077!7.18e-13!130;UBERON:0001007!1.12e-12!155;UBERON:0001555!1.12e-12!155;UBERON:0007026!1.12e-12!155;UBERON:0001041!4.99e-12!98;UBERON:0000166!3.71e-11!21;UBERON:0003124!9.89e-11!7;UBERON:0000064!1.03e-09!219;UBERON:0004921!2.69e-09!129;UBERON:0004185!2.69e-09!129;UBERON:0000165!3.60e-09!28;UBERON:0000930!3.60e-09!28;UBERON:0007196!8.16e-09!14;UBERON:0001558!8.16e-09!14;UBERON:0000478!3.49e-08!24;UBERON:0000161!4.25e-08!35;UBERON:0004815!8.48e-08!3;UBERON:0002031!8.48e-08!3;UBERON:0000365!1.01e-07!5;UBERON:0000062!1.65e-07!511;UBERON:0001949!2.15e-07!3;UBERON:0000305!5.01e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.76e-16;12!UBERON:0000065;1.08e-14;44!UBERON:0000365;1.03e-13;5!UBERON:0004815;1.78e-13;3!UBERON:0002031;1.78e-13;3!UBERON:0001949;7.53e-13;3!UBERON:0007196;1.59e-12;15!UBERON:0001558;1.59e-12;15!UBERON:0005910;1.94e-11;6!UBERON:0000072;2.57e-11;37!UBERON:0005911;4.42e-11;36!UBERON:0004807;1.17e-10;22!UBERON:0001987;2.09e-10;4!UBERON:0001911;2.30e-10;4!UBERON:0001708;1.93e-09;4!UBERON:0008895;1.93e-09;4!UBERON:0001004;5.84e-09;65!UBERON:0002185;2.98e-08;5!UBERON:0005178;7.71e-08;34!UBERON:0002224;7.71e-08;34!UBERON:0011159;1.22e-07;5!UBERON:0005181;1.27e-07;35!UBERON:0001737;6.55e-07;9!UBERON:0001557;6.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.14e-17,160;UBERON:0000925,7.14e-17,160;UBERON:0006595,7.14e-17,160;UBERON:0001004,1.14e-16,74;UBERON:0000065,4.13e-15,54;UBERON:0000365,9.83e-14,5;UBERON:0004815,1.67e-13,3;UBERON:0002031,1.67e-13,3;UBERON:0001949,9.82e-13,3;UBERON:0007196,1.52e-12,15;UBERON:0001558,1.52e-12,15;UBERON:0008947,1.72e-12,38;UBERON:0003258,1.72e-12,38;UBERON:0005910,1.86e-11,6;UBERON:0001987,1.94e-10,4;UBERON:0004340,1.94e-10,4;UBERON:0001911,2.27e-10,4;UBERON:0005333,2.27e-10,4;UBERON:0008425,2.27e-10,4;UBERON:0005311,2.27e-10,4;UBERON:0005157,3.14e-10,47;UBERON:0000072,1.25e-09,47;UBERON:0001708,1.69e-09,4;UBERON:0008895,1.69e-09,4;UBERON:0005153,2.43e-09,37;UBERON:0002185,2.87e-08,5;UBERON:0005178,2.98e-08,34;UBERON:0002224,2.98e-08,34;UBERON:0004807,4.57e-08,28;UBERON:0005181,5.70e-08,35;UBERON:0003102,8.05e-08,99;UBERON:0011159,1.10e-07,5;UBERON:0006554,5.33e-07,47;UBERON:0001008,8.14e-07,48;UBERON:0001737,8.24e-07,9 | |||
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|short_description=p1@CU687211 | |short_description=p1@CU687211 | ||
}} | }} |
Latest revision as of 16:46, 25 July 2015
Short description: | p1@CU687211 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU687211_5end |
Coexpression cluster: | C1170_Placental_Bronchial_nasal_Esophageal_Urothelial_Corneal_Keratinocyte |
Association with transcript: | 48bp_to_CU687211_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data