FFCP PHASE1:Hg19::chr17:77034997..77035009,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:77034997..77035009,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr17:77034997..77035009,+ | |description=CAGE_peak_at_chr17:77034997..77035009,+ | ||
|id=chr17:77034997..77035009,+ | |id=chr17:77034997..77035009,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.23e-15!42;CL:0000048!1.72e-13!430;CL:0000034!2.19e-13!444;CL:0000723!3.17e-13!436;CL:0000860!4.19e-13!45;CL:0002194!5.34e-11!63;CL:0000576!5.34e-11!63;CL:0000040!5.34e-11!63;CL:0000559!5.34e-11!63;CL:0002009!2.46e-10!65;CL:0000839!4.47e-10!70;CL:0000557!8.78e-10!71;CL:0000134!4.21e-09!358;CL:0000766!1.89e-08!76;CL:0002320!2.22e-08!365;CL:0000012!1.32e-07!682;CL:0000144!4.46e-07!625;CL:0000359!5.42e-07!32;CL:0000548!6.62e-07!679;CL:0000004!6.62e-07!679;CL:0000255!6.62e-07!679 | |ontology_enrichment_celltype=CL:0002057!9.23e-15!42;CL:0000048!1.72e-13!430;CL:0000034!2.19e-13!444;CL:0000723!3.17e-13!436;CL:0000860!4.19e-13!45;CL:0002194!5.34e-11!63;CL:0000576!5.34e-11!63;CL:0000040!5.34e-11!63;CL:0000559!5.34e-11!63;CL:0002009!2.46e-10!65;CL:0000839!4.47e-10!70;CL:0000557!8.78e-10!71;CL:0000134!4.21e-09!358;CL:0000766!1.89e-08!76;CL:0002320!2.22e-08!365;CL:0000012!1.32e-07!682;CL:0000144!4.46e-07!625;CL:0000359!5.42e-07!32;CL:0000548!6.62e-07!679;CL:0000004!6.62e-07!679;CL:0000255!6.62e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.59e-22;33!CL:0002057;7.59e-22;33!CL:0000473;1.27e-14;39!CL:0000234;1.27e-14;39!CL:0000569;2.28e-13;4!CL:0000576;4.48e-13;48!CL:0000766;6.42e-09;69!CL:0000134;2.92e-07;55!CL:0000048;7.17e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.54e-25,42;CL:0002057,1.54e-25,42;CL:0000473,1.05e-21,48;CL:0000234,1.05e-21,48;CL:0002194,2.33e-16,59;CL:0000576,2.33e-16,59;CL:0000040,2.33e-16,59;CL:0000559,2.33e-16,59;CL:0002009,1.14e-15,61;CL:0000839,3.90e-14,66;CL:0000034,5.17e-14,441;CL:0000557,7.43e-14,67;CL:0000569,1.07e-13,4;CL:0000011,1.07e-13,4;CL:0000048,3.42e-13,427;CL:0000723,7.76e-13,433;CL:0000766,1.42e-12,72;CL:0000134,1.42e-10,354;CL:0002320,3.70e-10,361;CL:0000219,1.08e-08,386;CL:0002087,4.92e-07,115;CL:0000763,6.46e-07,108;CL:0000049,6.46e-07,108;CL:0002494,9.44e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002057;7.05e-18;42!CL:0000011;2.28e-13;4 | |||
|ontology_enrichment_disease=DOID:2394!7.21e-12!14 | |ontology_enrichment_disease=DOID:2394!7.21e-12!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.28e-17;14!DOID:120;3.38e-08;27!DOID:193;1.60e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.42e-17,14;DOID:120,3.47e-08,27;DOID:193,1.64e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.21e-13!167;UBERON:0002371!2.53e-10!80;UBERON:0003081!5.97e-10!216;UBERON:0000926!9.29e-10!448;UBERON:0004120!9.29e-10!448;UBERON:0006603!9.29e-10!448;UBERON:0001474!8.58e-09!86;UBERON:0002384!1.72e-08!375;UBERON:0004573!9.68e-08!33;UBERON:0004571!9.68e-08!33;UBERON:0002390!1.17e-07!102;UBERON:0003061!1.17e-07!102;UBERON:0002405!1.34e-07!115;UBERON:0004765!1.66e-07!101;UBERON:0001434!1.66e-07!101;UBERON:0002193!2.00e-07!112 | |ontology_enrichment_uberon=UBERON:0002204!2.21e-13!167;UBERON:0002371!2.53e-10!80;UBERON:0003081!5.97e-10!216;UBERON:0000926!9.29e-10!448;UBERON:0004120!9.29e-10!448;UBERON:0006603!9.29e-10!448;UBERON:0001474!8.58e-09!86;UBERON:0002384!1.72e-08!375;UBERON:0004573!9.68e-08!33;UBERON:0004571!9.68e-08!33;UBERON:0002390!1.17e-07!102;UBERON:0003061!1.17e-07!102;UBERON:0002405!1.34e-07!115;UBERON:0004765!1.66e-07!101;UBERON:0001434!1.66e-07!101;UBERON:0002193!2.00e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;2.96e-11;13!UBERON:0002118;2.71e-10;5!UBERON:0004573;9.77e-09;33!UBERON:0004571;9.77e-09;33!UBERON:0002119;4.38e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.48e-14,76;UBERON:0003081,1.91e-14,203;UBERON:0001474,4.09e-13,82;UBERON:0004765,1.70e-11,90;UBERON:0002390,2.84e-11,98;UBERON:0003061,2.84e-11,98;UBERON:0000992,3.20e-11,13;UBERON:0002405,5.79e-11,93;UBERON:0000926,8.30e-11,315;UBERON:0004120,8.30e-11,315;UBERON:0006603,8.30e-11,315;UBERON:0002204,1.35e-10,167;UBERON:0002384,2.68e-10,371;UBERON:0002118,3.04e-10,5;UBERON:0001434,7.58e-10,100;UBERON:0002193,9.61e-10,108;UBERON:0004573,1.29e-09,33;UBERON:0004571,1.29e-09,33;UBERON:0002119,4.39e-08,4;UBERON:0001637,4.37e-07,42;UBERON:0003509,4.37e-07,42;UBERON:0004572,4.37e-07,42 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0,2.01697543935533,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,5.53995408531877,5.21415563422368,4.55722828503289,0,0,0,0,0,0.242584061187816,0.232429036905685,1.6446715520873,1.54853185447552,1.7261543539329,0.768482119587302,2.36482229888585,9.99762474136194,4.51839278508678,6.77132432971709,0.188242339542605,0,0.898893937780338,4.89734227793444,6.41858054152187,5.11469700639233,0,0.199463657621632,0,13.3496249769149,7.37600792098482,6.85104473895132,0.251248665256743,0.521482918420201,0.217188844705117,12.1079900526674,12.1531619875896,13.607882659958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.00267582127178,0.289693037921647,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97227542439656,1.14734648299525,0,0,0,0.98667019366864,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0,0.45071417671979,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.330881918197182,0.217879444092406,0.474541238222193,0.674156540800822,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0.567100388969546,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0.845302752556,0,0,0,0,0.266422179016099,1.14382394926518,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.904318131178758,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,1.17400313583789,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.768834895534206,0,0,1.48418066444991,0.308419387605311,0.710246901252508,0.492762936082855,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,3.1481234683064,0.6970372701606,2.15623506123262,3.19383618190213,0,0.74129687641568,0.429374660225974,0,0,0,0.511795582622668,0.42793898803392,0.636406495851874,3.13979456079692,0.179872457583315,0,0.235624804691373,1.41527737101321,0,1.26377536871694,0,1.70599442741899,0,0,0.141405431953713,0,0.551365343546124,1.32687795048244,0.876901770507525,0,0,0,0,0,0.430234056612155,0,0.35667105148125,0,0.633322905892992,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779160935160341,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02547850262301,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0.661983911750998,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,2.1760712134779,6.5179372445902,8.57767614937692,2.95085367638824,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.705797459094515,0,0,0.298509605773748,1.16856654923612,0,1.13641803165053,0.251567901752575,2.66943366478961,3.8902811627477,3.4783112465545,1.86524640699337,1.77426179987561,2.38945150745554,2.24901556081802,2.01841843939137,0.414706207840855,0.265841714557995,0.521745061811734,3.60618261593324,3.80805212168795,2.03435366602331,1.09109195521536,1.18151612746737,1.85613503951397,0.398095888698616,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0.308801447160972,0.219284049578707,0.176689145945881,0.578742114812744,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.762764190934334,0,0,0,1.81534561833168,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.685952037749674,0,0,0,0.111231401892069,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0.423387050190929,0,0.62041277132864,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715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| ||
|short_description=p@chr17:77034997..77035009,+ | |short_description=p@chr17:77034997..77035009,+ | ||
}} | }} |
Latest revision as of 22:12, 25 July 2015
Short description: | p@chr17:77034997..77035009, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77034997..77035009, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.54e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-25 | 42 |
defensive cell | 1.05e-21 | 48 |
phagocyte | 1.05e-21 | 48 |
monopoietic cell | 2.33e-16 | 59 |
monocyte | 2.33e-16 | 59 |
monoblast | 2.33e-16 | 59 |
promonocyte | 2.33e-16 | 59 |
macrophage dendritic cell progenitor | 1.14e-15 | 61 |
myeloid lineage restricted progenitor cell | 3.90e-14 | 66 |
stem cell | 5.17e-14 | 441 |
granulocyte monocyte progenitor cell | 7.43e-14 | 67 |
cardiac mesenchymal cell | 1.07e-13 | 4 |
migratory trunk neural crest cell | 1.07e-13 | 4 |
multi fate stem cell | 3.42e-13 | 427 |
somatic stem cell | 7.76e-13 | 433 |
myeloid leukocyte | 1.42e-12 | 72 |
mesenchymal cell | 1.42e-10 | 354 |
connective tissue cell | 3.70e-10 | 361 |
motile cell | 1.08e-08 | 386 |
nongranular leukocyte | 4.92e-07 | 115 |
myeloid cell | 6.46e-07 | 108 |
common myeloid progenitor | 6.46e-07 | 108 |
cardiocyte | 9.44e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.48e-14 | 76 |
lateral plate mesoderm | 1.91e-14 | 203 |
bone element | 4.09e-13 | 82 |
skeletal element | 1.70e-11 | 90 |
hematopoietic system | 2.84e-11 | 98 |
blood island | 2.84e-11 | 98 |
female gonad | 3.20e-11 | 13 |
immune system | 5.79e-11 | 93 |
mesoderm | 8.30e-11 | 315 |
mesoderm-derived structure | 8.30e-11 | 315 |
presumptive mesoderm | 8.30e-11 | 315 |
musculoskeletal system | 1.35e-10 | 167 |
connective tissue | 2.68e-10 | 371 |
right ovary | 3.04e-10 | 5 |
skeletal system | 7.58e-10 | 100 |
hemolymphoid system | 9.61e-10 | 108 |
systemic artery | 1.29e-09 | 33 |
systemic arterial system | 1.29e-09 | 33 |
left ovary | 4.39e-08 | 4 |
artery | 4.37e-07 | 42 |
arterial blood vessel | 4.37e-07 | 42 |
arterial system | 4.37e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.42e-17 | 14 |
female reproductive organ cancer | 3.47e-08 | 27 |
reproductive organ cancer | 1.64e-07 | 29 |