FFCP PHASE1:Hg19::chr17:78820274..78820277,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:78820274..78820277,+
|short_description=p@chr17:78820274..78820277,+
|description=CAGE_peak_at_chr17:78820274..78820277,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:78820274..78820277,+ | |||
|description=CAGE_peak_at_chr17:78820274..78820277,+ | |||
|id=chr17:78820274..78820277,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.44e-19!42;CL:0000860!6.77e-18!45;CL:0000839!1.06e-14!70;CL:0002194!2.64e-14!63;CL:0000576!2.64e-14!63;CL:0000040!2.64e-14!63;CL:0000559!2.64e-14!63;CL:0002009!5.41e-14!65;CL:0000557!2.77e-13!71;CL:0000766!6.07e-13!76;CL:0002371!1.18e-09!591;CL:0000548!1.69e-09!679;CL:0000004!1.69e-09!679;CL:0000255!1.69e-09!679;CL:0000012!4.38e-09!682;CL:0000144!4.39e-09!625;CL:0000003!9.17e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.06e-20;33!CL:0002057;9.06e-20;33!CL:0000473;9.25e-17;39!CL:0000234;9.25e-17;39!CL:0000576;1.63e-11;48!CL:0000766;1.69e-08;69!CL:0002561;1.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.57e-23,48;CL:0000234,8.57e-23,48;CL:0000860,3.53e-21,42;CL:0002057,3.53e-21,42;CL:0002194,3.48e-17,59;CL:0000576,3.48e-17,59;CL:0000040,3.48e-17,59;CL:0000559,3.48e-17,59;CL:0002009,1.83e-16,61;CL:0000839,7.47e-15,66;CL:0000766,8.90e-15,72;CL:0000557,1.47e-14,67;CL:0000763,3.31e-08,108;CL:0000049,3.31e-08,108;CL:0002561,5.00e-08,2;CL:0002559,9.65e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.46e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.23e-12!80;UBERON:0002204!1.58e-12!167;UBERON:0004765!2.93e-11!101;UBERON:0001434!2.93e-11!101;UBERON:0001474!8.23e-11!86;UBERON:0002390!1.09e-10!102;UBERON:0003061!1.09e-10!102;UBERON:0003081!1.85e-10!216;UBERON:0002193!2.38e-10!112;UBERON:0000468!1.08e-07!659;UBERON:0000926!5.20e-07!448;UBERON:0004120!5.20e-07!448;UBERON:0006603!5.20e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.04e-07;2!UBERON:0005942;1.04e-07;2!UBERON:0005932;1.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,6.06e-14,100;UBERON:0002371,8.91e-14,76;UBERON:0004765,2.39e-13,90;UBERON:0002204,4.69e-13,167;UBERON:0000926,9.24e-13,315;UBERON:0004120,9.24e-13,315;UBERON:0006603,9.24e-13,315;UBERON:0001474,2.12e-12,82;UBERON:0002390,5.69e-12,98;UBERON:0003061,5.69e-12,98;UBERON:0002405,1.53e-11,93;UBERON:0002193,1.78e-11,108;UBERON:0003081,4.42e-11,203;UBERON:0005933,5.00e-08,2;UBERON:0005942,5.00e-08,2;UBERON:0005932,5.00e-08,2;UBERON:0002050,1.56e-07,564;UBERON:0000923,4.20e-07,560;UBERON:0010316,4.20e-07,560;UBERON:0005291,4.20e-07,560;UBERON:0006598,4.20e-07,560;UBERON:0010317,4.20e-07,560;UBERON:0002532,4.20e-07,560;UBERON:0005423,6.22e-07,581;UBERON:0002073,9.65e-07,5;UBERON:0005086,9.65e-07,5 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,1.0007329835313,1.34088328328186,0.872338524100369,0,1.26343974685366,0.522371256399677,0.245733936501509,0.697801167972428,0,0.527533956456907,0.123766352960047,0.994192127183747,0.672325146451775,0.602694528023977,1.46062018077475,1.46379839637152,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0.257575567634187,0.290796477559129,0.755751887377619,0.485168122375632,2.09186133215116,2.87817521615278,0.929119112685311,2.3015391385772,0,0.945928919554341,1.72372840368309,0.645484683583826,1.35426486594342,0.564727018627814,2.72906150057846,1.34834090667051,0.918251677112708,1.60464513538047,1.27867425159808,0.659702600373432,1.59570926097305,1.27867425159808,0.580418477257168,3.97169657283798,3.11411124497787,0.502497330513487,1.0429658368404,0.65156653411535,0,1.84138817993782,3.16462387440884,0.845021145247767,1.06302149982522,0.838634582033504,0.112328631146495,0.150176892841506,0.48217676009124,0,0.19891667719909,1.46131323011707,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,2.43806866313962,2.01210257911091,0.639312809217652,0,0,0.289693037921647,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,1.09288586487763,0,0,0.522389211897802,0.26591592103773,0,0,0,0.39752481473341,0,0.694281003215189,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0.468642863667593,0.936480230490962,1.1409436430889,0,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0,0,0,1.31693286264251,0,0.600952235626387,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0,0.184099797284599,0.969876340912871,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,1.56449532329816,0,0,1.85747171212792,2.16563844500876,0.828147600278907,0.674338760312407,1.20505514941741,0.330881918197182,0.653638332277218,0.71181185733329,0.539325232640658,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,1.1240175325762,0.100528972411631,0.0925884451585296,0.977424915930974,2.07986957055916,0,0.231860809950154,0.352226082707465,0.577465791044295,1.38895653772983,0.380508304469197,0,0,0.492434012174795,0,1.63494278517601,0,1.00789276919316,0.567100388969546,0.268675568108545,0,0,0,0.176096868026452,0.414656231081544,0,0.25248486685276,0.190493682876507,0.381988425558278,0,0,0.411309970813294,0,0.857479297891735,0,0.87192013766656,0.07333828582095,0.517086863031111,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0.199945982364114,4.86495122564762,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0.24538298343828,0,1.35632511849868,0.623912584592421,0.892144943985809,0.630809660135739,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,0.783204629850962,1.02943027143257,0.206768026122887,0,0.106727557803444,0,1.66435439510497,0,0.248107807818777,0.153461973288062,0.561320188866147,0.896974044789907,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0,0,0.232420756919918,0,0.802025881213139,0.0920809889358963,0.34444334449382,0,0.524497659837696,0,0,0,0,0.105551628892876,1.13733384070897,1.19065593693561,0,1.54227252690289,0.541892875087706,0.501689773854853,0.254876273045038,0.831076008928724,0,0.219259876645935,0.784306353074702,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0,0.30347334256665,4.64845549297286,0.94443704049192,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0,0.190630193923825,1.27948895655667,0.42793898803392,0.318203247925937,0,0,0,0.235624804691373,0.202182481573316,0,0,1.46290121726877,0.974853958525138,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,1.73632660280006,0,0,0,0,0.286822704408103,0.392996164052485,0,0,0.211107635297664,1.31717957183961,0,0.699869440489966,0,0,0,0.188287601553558,1.72202149068492,1.68471475667626,0,0.229723400206959,0.507447609232169,1.52927441428475,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0,0.962479855263359,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0.293016358543788,0.121360521749513,0,0.284136146806413,0,0,0.307160702099232,0,0,0.445234820091624,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,2.3948309234694,0,0.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| ||
|short_description=p@chr17:78820274..78820277,+ | |||
}} | }} |
Latest revision as of 22:34, 25 July 2015
Short description: | p@chr17:78820274..78820277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:78820274..78820277, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.57e-23 | 48 |
phagocyte | 8.57e-23 | 48 |
classical monocyte | 3.53e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-21 | 42 |
monopoietic cell | 3.48e-17 | 59 |
monocyte | 3.48e-17 | 59 |
monoblast | 3.48e-17 | 59 |
promonocyte | 3.48e-17 | 59 |
macrophage dendritic cell progenitor | 1.83e-16 | 61 |
myeloid lineage restricted progenitor cell | 7.47e-15 | 66 |
myeloid leukocyte | 8.90e-15 | 72 |
granulocyte monocyte progenitor cell | 1.47e-14 | 67 |
myeloid cell | 3.31e-08 | 108 |
common myeloid progenitor | 3.31e-08 | 108 |
outer root sheath cell | 5.00e-08 | 2 |
hair follicle cell | 9.65e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 6.06e-14 | 100 |
bone marrow | 8.91e-14 | 76 |
skeletal element | 2.39e-13 | 90 |
musculoskeletal system | 4.69e-13 | 167 |
mesoderm | 9.24e-13 | 315 |
mesoderm-derived structure | 9.24e-13 | 315 |
presumptive mesoderm | 9.24e-13 | 315 |
bone element | 2.12e-12 | 82 |
hematopoietic system | 5.69e-12 | 98 |
blood island | 5.69e-12 | 98 |
immune system | 1.53e-11 | 93 |
hemolymphoid system | 1.78e-11 | 108 |
lateral plate mesoderm | 4.42e-11 | 203 |
hair root sheath | 5.00e-08 | 2 |
hair outer root sheath | 5.00e-08 | 2 |
bulb of hair follicle | 5.00e-08 | 2 |
embryonic structure | 1.56e-07 | 564 |
germ layer | 4.20e-07 | 560 |
germ layer / neural crest | 4.20e-07 | 560 |
embryonic tissue | 4.20e-07 | 560 |
presumptive structure | 4.20e-07 | 560 |
germ layer / neural crest derived structure | 4.20e-07 | 560 |
epiblast (generic) | 4.20e-07 | 560 |
developing anatomical structure | 6.22e-07 | 581 |
hair follicle | 9.65e-07 | 5 |
hair follicle placode | 9.65e-07 | 5 |