FFCP PHASE1:Hg19::chr18:43789274..43789277,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:43789274..43789277,+ | |||
|description=CAGE_peak_at_chr18:43789274..43789277,+ | |description=CAGE_peak_at_chr18:43789274..43789277,+ | ||
|id=chr18:43789274..43789277,+ | |id=chr18:43789274..43789277,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.41e-09!140;CL:0002087!7.44e-09!119;CL:0000037!1.92e-08!172;CL:0000566!1.92e-08!172;CL:0000988!3.92e-08!182;CL:0002032!6.65e-08!165;CL:0000837!6.65e-08!165;CL:0002031!1.10e-07!124 | |ontology_enrichment_celltype=CL:0000738!3.41e-09!140;CL:0002087!7.44e-09!119;CL:0000037!1.92e-08!172;CL:0000566!1.92e-08!172;CL:0000988!3.92e-08!182;CL:0002032!6.65e-08!165;CL:0000837!6.65e-08!165;CL:0002031!1.10e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000775;4.52e-08;3!CL:0000784;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.52e-08,3;CL:0000784,7.26e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.95e-27;3!UBERON:0005425;5.16e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.16e-21;1!UBERON:0001785;5.16e-21;1!UBERON:0002464;5.16e-21;1!UBERON:0004904;5.16e-21;1!UBERON:0001021;5.16e-21;1!UBERON:0003714;3.34e-11;2!UBERON:0005162;3.34e-11;2!UBERON:0000122;3.34e-11;2!UBERON:0002104;3.69e-09;21!UBERON:0001032;4.36e-08;24!UBERON:0004456;4.36e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.45e-21,1;UBERON:0001785,3.45e-21,1;UBERON:0002464,3.45e-21,1;UBERON:0004904,3.45e-21,1;UBERON:0001021,3.45e-21,1;UBERON:0003902,3.45e-21,1;UBERON:0005425,3.45e-21,1;UBERON:0000966,2.66e-14,6;UBERON:0005388,2.66e-14,6;UBERON:0001802,2.66e-14,6;UBERON:0003714,2.73e-11,2;UBERON:0005162,2.73e-11,2;UBERON:0000122,2.73e-11,2;UBERON:0000019,1.32e-09,20;UBERON:0000047,1.32e-09,20;UBERON:0010312,1.32e-09,20;UBERON:0004088,1.32e-09,20;UBERON:0010230,1.32e-09,20;UBERON:0003072,1.32e-09,20;UBERON:0004128,1.32e-09,20;UBERON:0003071,1.32e-09,20;UBERON:0000970,3.54e-09,21;UBERON:0002104,3.54e-09,21;UBERON:0001456,8.70e-09,22;UBERON:0000020,4.20e-08,24;UBERON:0001032,4.20e-08,24;UBERON:0004456,4.20e-08,24 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0.575384784644301,0,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,1.32171328579026,0,0.263384084775077,0,1.57204305099666,0,0,0,0,0,0,0,0,0,0.384273959177026,0.260118695119756,0.493313713811028,0.552700035571697,0,0,0.535081656179426,0,0.339928028092699,0.766440987203842,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,1.19245312152671,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0.862510299438069,0.77005821767849,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0.106824071127473,2.88743956579008,0,0.185803175125719,0.144269212976445,0.213425530045242,0.318852545457645,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569261198172555,0.158936578980379,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,1.16495949527454,0,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0.653174720218818,1.19730191562487,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0.276697269872462,0,0.151649117541648,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,1.09394961803644,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,2.84424501118908,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0.23806443146374,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,0,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0.575384784644301,0,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,1.32171328579026,0,0.263384084775077,0,1.57204305099666,0,0,0,0,0,0,0,0,0,0.384273959177026,0.260118695119756,0.493313713811028,0.552700035571697,0,0,0.535081656179426,0,0.339928028092699,0.766440987203842,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,1.19245312152671,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0.862510299438069,0.77005821767849,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0.106824071127473,2.88743956579008,0,0.185803175125719,0.144269212976445,0.213425530045242,0.318852545457645,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569261198172555,0.158936578980379,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,1.16495949527454,0,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0.653174720218818,1.19730191562487,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0.276697269872462,0,0.151649117541648,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,1.09394961803644,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,2.84424501118908,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0.23806443146374,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,0,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr18:43789274..43789277,+ | |short_description=p@chr18:43789274..43789277,+ | ||
}} | }} |
Latest revision as of 01:01, 26 July 2015
Short description: | p@chr18:43789274..43789277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:43789274..43789277, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.52e-08 | 3 |
plasmacytoid dendritic cell | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.45e-21 | 1 |
cranial nerve | 3.45e-21 | 1 |
nerve trunk | 3.45e-21 | 1 |
nerve connecting eye with brain | 3.45e-21 | 1 |
nerve | 3.45e-21 | 1 |
retinal neural layer | 3.45e-21 | 1 |
presumptive neural retina | 3.45e-21 | 1 |
retina | 2.66e-14 | 6 |
photoreceptor array | 2.66e-14 | 6 |
posterior segment of eyeball | 2.66e-14 | 6 |
neural tissue | 2.73e-11 | 2 |
multi cell component structure | 2.73e-11 | 2 |
neuron projection bundle | 2.73e-11 | 2 |
camera-type eye | 1.32e-09 | 20 |
simple eye | 1.32e-09 | 20 |
immature eye | 1.32e-09 | 20 |
ocular region | 1.32e-09 | 20 |
eyeball of camera-type eye | 1.32e-09 | 20 |
optic cup | 1.32e-09 | 20 |
optic vesicle | 1.32e-09 | 20 |
eye primordium | 1.32e-09 | 20 |
eye | 3.54e-09 | 21 |
visual system | 3.54e-09 | 21 |
face | 8.70e-09 | 22 |
sense organ | 4.20e-08 | 24 |
sensory system | 4.20e-08 | 24 |
entire sense organ system | 4.20e-08 | 24 |