FFCP PHASE1:Hg19::chr19:36245680..36245700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:36245680..36245700,+ | |||
|coexpression_cluster_id=C339 | |||
|description=CAGE_peak_at_chr19:36245680..36245700,+ | |description=CAGE_peak_at_chr19:36245680..36245700,+ | ||
|id=chr19:36245680..36245700,+ | |id=chr19:36245680..36245700,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.47e-25!180;CL:0000680!3.52e-17!57;CL:0000056!3.52e-17!57;CL:0000355!3.52e-17!57;CL:0000183!3.72e-17!59;CL:0000187!7.47e-17!54;CL:0000057!4.07e-15!75;CL:0000393!2.73e-14!60;CL:0000211!2.73e-14!60;CL:0000192!4.87e-14!42;CL:0000514!4.87e-14!42;CL:0000136!8.06e-11!15;CL:0000359!7.73e-09!32;CL:0002334!1.35e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.47e-25!180;CL:0000680!3.52e-17!57;CL:0000056!3.52e-17!57;CL:0000355!3.52e-17!57;CL:0000183!3.72e-17!59;CL:0000187!7.47e-17!54;CL:0000057!4.07e-15!75;CL:0000393!2.73e-14!60;CL:0000211!2.73e-14!60;CL:0000192!4.87e-14!42;CL:0000514!4.87e-14!42;CL:0000136!8.06e-11!15;CL:0000359!7.73e-09!32;CL:0002334!1.35e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000192;2.65e-12;43!CL:0000136;1.34e-11;13!CL:0000187;1.00e-10;55!CL:0002334;4.21e-09;12!CL:0000393;6.41e-09;61!CL:0000211;6.41e-09;61!CL:0000359;1.65e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,9.72e-19,55;CL:0000680,1.28e-18,58;CL:0000056,1.28e-18,58;CL:0000355,1.28e-18,58;CL:0000192,1.11e-15,43;CL:0000514,1.11e-15,43;CL:0000393,2.58e-15,61;CL:0000211,2.58e-15,61;CL:0000057,1.49e-13,76;CL:0000136,3.23e-13,15;CL:0002334,3.67e-09,12;CL:0000359,9.45e-09,32;CL:0000048,2.75e-08,427;CL:0000723,1.19e-07,433;CL:0000034,7.52e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;2.65e-12;43!CL:0000355;3.93e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.62e-20!63;UBERON:0001015!1.62e-20!63;UBERON:0000383!1.62e-20!63;UBERON:0004290!5.24e-20!70;UBERON:0001134!9.83e-20!61;UBERON:0002036!9.83e-20!61;UBERON:0003082!9.83e-20!61;UBERON:0000914!1.40e-19!83;UBERON:0002329!1.40e-19!83;UBERON:0003077!1.40e-19!83;UBERON:0003059!1.40e-19!83;UBERON:0007282!1.40e-19!83;UBERON:0009618!1.40e-19!83;UBERON:0007285!1.40e-19!83;UBERON:0000475!4.77e-16!365;UBERON:0005256!2.54e-15!143;UBERON:0000486!3.03e-15!82;UBERON:0000481!3.76e-12!347;UBERON:0000468!4.87e-11!659;UBERON:0002100!8.17e-11!216;UBERON:0000479!2.84e-10!787;UBERON:0000119!2.94e-10!312;UBERON:0000483!3.52e-10!309;UBERON:0004872!5.05e-10!84;UBERON:0001013!1.61e-09!14;UBERON:0007100!1.05e-08!27;UBERON:0007023!3.38e-08!115;UBERON:0000948!1.44e-07!24;UBERON:0005498!1.44e-07!24;UBERON:0004140!1.44e-07!24;UBERON:0009881!1.44e-07!24;UBERON:0004141!1.44e-07!24;UBERON:0003084!1.44e-07!24;UBERON:0007005!1.44e-07!24;UBERON:0004139!1.44e-07!24;UBERON:0004291!1.44e-07!24;UBERON:0001135!1.71e-07!15;UBERON:0000490!3.58e-07!138;UBERON:0003104!4.09e-07!238;UBERON:0009142!4.09e-07!238;UBERON:0003914!4.26e-07!118;UBERON:0000467!6.32e-07!625;UBERON:0000480!8.55e-07!626;UBERON:0001009!8.96e-07!113 | |ontology_enrichment_uberon=UBERON:0002385!1.62e-20!63;UBERON:0001015!1.62e-20!63;UBERON:0000383!1.62e-20!63;UBERON:0004290!5.24e-20!70;UBERON:0001134!9.83e-20!61;UBERON:0002036!9.83e-20!61;UBERON:0003082!9.83e-20!61;UBERON:0000914!1.40e-19!83;UBERON:0002329!1.40e-19!83;UBERON:0003077!1.40e-19!83;UBERON:0003059!1.40e-19!83;UBERON:0007282!1.40e-19!83;UBERON:0009618!1.40e-19!83;UBERON:0007285!1.40e-19!83;UBERON:0000475!4.77e-16!365;UBERON:0005256!2.54e-15!143;UBERON:0000486!3.03e-15!82;UBERON:0000481!3.76e-12!347;UBERON:0000468!4.87e-11!659;UBERON:0002100!8.17e-11!216;UBERON:0000479!2.84e-10!787;UBERON:0000119!2.94e-10!312;UBERON:0000483!3.52e-10!309;UBERON:0004872!5.05e-10!84;UBERON:0001013!1.61e-09!14;UBERON:0007100!1.05e-08!27;UBERON:0007023!3.38e-08!115;UBERON:0000948!1.44e-07!24;UBERON:0005498!1.44e-07!24;UBERON:0004140!1.44e-07!24;UBERON:0009881!1.44e-07!24;UBERON:0004141!1.44e-07!24;UBERON:0003084!1.44e-07!24;UBERON:0007005!1.44e-07!24;UBERON:0004139!1.44e-07!24;UBERON:0004291!1.44e-07!24;UBERON:0001135!1.71e-07!15;UBERON:0000490!3.58e-07!138;UBERON:0003104!4.09e-07!238;UBERON:0009142!4.09e-07!238;UBERON:0003914!4.26e-07!118;UBERON:0000467!6.32e-07!625;UBERON:0000480!8.55e-07!626;UBERON:0001009!8.96e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.84e-13;31!UBERON:0001015;3.84e-13;31!UBERON:0000383;3.84e-13;31!UBERON:0001013;1.80e-11;14!UBERON:0001135;3.93e-09;15!UBERON:0007100;6.06e-08;25!UBERON:0004457;2.75e-07;9!UBERON:0000042;2.75e-07;9!UBERON:0000948;4.98e-07;22!UBERON:0003688;5.13e-07;6!UBERON:0002358;5.13e-07;6!UBERON:0003684;5.13e-07;6!UBERON:0001178;5.13e-07;6 | |||
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| ||
|short_description=p@chr19:36245680..36245700,+ | |short_description=p@chr19:36245680..36245700,+ | ||
}} | }} |
Latest revision as of 06:49, 26 July 2015
Short description: | p@chr19:36245680..36245700, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36245680..36245700, + |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 9.72e-19 | 55 |
muscle precursor cell | 1.28e-18 | 58 |
myoblast | 1.28e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.28e-18 | 58 |
smooth muscle cell | 1.11e-15 | 43 |
smooth muscle myoblast | 1.11e-15 | 43 |
electrically responsive cell | 2.58e-15 | 61 |
electrically active cell | 2.58e-15 | 61 |
fibroblast | 1.49e-13 | 76 |
fat cell | 3.23e-13 | 15 |
preadipocyte | 3.67e-09 | 12 |
vascular associated smooth muscle cell | 9.45e-09 | 32 |
multi fate stem cell | 2.75e-08 | 427 |
somatic stem cell | 1.19e-07 | 433 |
stem cell | 7.52e-07 | 441 |