FFCP PHASE1:Hg19::chr19:703728..703761,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:703728..703761,- | |||
|coexpression_cluster_id=C1829 | |||
|description=CAGE_peak_at_chr19:703728..703761,- | |description=CAGE_peak_at_chr19:703728..703761,- | ||
|id=chr19:703728..703761,- | |id=chr19:703728..703761,- | ||
|ontology_enrichment_celltype=CL:0000763!3.25e-46!112;CL:0000049!3.25e-46!112;CL:0000839!2.17e-27!70;CL:0000557!4.26e-26!71;CL:0000037!8.18e-26!172;CL:0000566!8.18e-26!172;CL:0000766!3.20e-25!76;CL:0002032!1.06e-24!165;CL:0000837!1.06e-24!165;CL:0002194!7.34e-24!63;CL:0000576!7.34e-24!63;CL:0000040!7.34e-24!63;CL:0000559!7.34e-24!63;CL:0000988!1.32e-22!182;CL:0002009!1.42e-22!65;CL:0000860!1.67e-20!45;CL:0002057!1.87e-18!42;CL:0002031!4.01e-10!124;CL:0000738!1.24e-09!140;CL:0002087!4.15e-09!119 | |ontology_enrichment_celltype=CL:0000763!3.25e-46!112;CL:0000049!3.25e-46!112;CL:0000839!2.17e-27!70;CL:0000557!4.26e-26!71;CL:0000037!8.18e-26!172;CL:0000566!8.18e-26!172;CL:0000766!3.20e-25!76;CL:0002032!1.06e-24!165;CL:0000837!1.06e-24!165;CL:0002194!7.34e-24!63;CL:0000576!7.34e-24!63;CL:0000040!7.34e-24!63;CL:0000559!7.34e-24!63;CL:0000988!1.32e-22!182;CL:0002009!1.42e-22!65;CL:0000860!1.67e-20!45;CL:0002057!1.87e-18!42;CL:0002031!4.01e-10!124;CL:0000738!1.24e-09!140;CL:0002087!4.15e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000763;9.62e-19;100!CL:0000576;2.02e-15;48!CL:0000860;2.37e-12;33!CL:0002057;2.37e-12;33!CL:0000766;4.46e-10;69!CL:0000473;4.67e-10;39!CL:0000234;4.67e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.74e-50,108;CL:0000049,4.74e-50,108;CL:0002032,1.87e-30,161;CL:0000837,1.87e-30,161;CL:0000037,3.56e-30,168;CL:0000988,6.36e-28,177;CL:0000557,1.07e-18,67;CL:0000839,2.46e-17,66;CL:0000766,9.79e-17,72;CL:0002194,1.11e-16,59;CL:0000576,1.11e-16,59;CL:0000040,1.11e-16,59;CL:0000559,1.11e-16,59;CL:0002009,6.15e-16,61;CL:0000860,9.07e-14,42;CL:0002057,9.07e-14,42;CL:0000473,6.82e-13,48;CL:0000234,6.82e-13,48;CL:0000219,4.40e-09,386;CL:0000134,6.76e-09,354;CL:0002320,1.81e-08,361;CL:0000034,1.82e-07,441;CL:0002031,1.82e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000049;4.16e-16;108!CL:0002057;7.02e-10;42 | |||
|ontology_enrichment_disease=DOID:8692!4.12e-26!31;DOID:1240!2.17e-19!39;DOID:2531!5.12e-12!51;DOID:0060083!5.12e-12!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.52e-53;31!DOID:1240;6.63e-35;39!DOID:2531;1.61e-20;51!DOID:0060083;1.61e-20;51!DOID:1036;7.45e-11;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.65e-56,31;DOID:1240,6.25e-43,39;DOID:2531,6.73e-31,51;DOID:0060083,6.73e-31,51;DOID:1036,4.60e-11,8;DOID:0050686,7.79e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.19e-26!102;UBERON:0003061!3.19e-26!102;UBERON:0002193!1.37e-22!112;UBERON:0002371!2.73e-22!80;UBERON:0001474!2.31e-19!86;UBERON:0002405!1.80e-18!115;UBERON:0004765!1.35e-15!101;UBERON:0001434!1.35e-15!101;UBERON:0003081!6.99e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.30e-07;15!UBERON:0000179;3.30e-07;15!UBERON:0000463;3.30e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.88e-24,98;UBERON:0003061,6.88e-24,98;UBERON:0002193,9.01e-21,108;UBERON:0002371,2.87e-17,76;UBERON:0001474,1.76e-15,82;UBERON:0002405,4.67e-15,93;UBERON:0004765,1.78e-13,90;UBERON:0001434,1.96e-11,100;UBERON:0002384,6.88e-08,371;UBERON:0000178,1.56e-07,15;UBERON:0000179,1.56e-07,15;UBERON:0000463,1.56e-07,15;UBERON:0003081,1.91e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.18009283054671,0.767658796194425,0.309632246632152,0,0,0,0,0,12.9184193307333,0.553995408531877,0.802177789880567,1.30206522429511,2.91090116511902,0,1.80302897343931,2.90796477559129,0.755751887377619,1.4555043671269,0.697287110717054,0.411167888021826,0,1.1507695692886,0.256160706529101,1.18241114944293,1.03423704220986,1.93645405075148,2.70852973188684,0.752969358170419,0.272906150057846,0.449446968890169,0,0.320929027076094,0,0.989553900560148,1.19678194572979,1.27867425159808,0,0,1.24564449799115,1.00499466102697,0.521482918420201,1.52032191293582,0,0,0.316462387440884,1.05627643155971,0.637812899895131,0,2.58355851636939,1.95229960693958,2.08943262706204,1.14005097496499,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,6.60856642895129,2.80254281490768,5.79444986505169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.870648686496336,0.26591592103773,0.476981248610684,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,1.62028389576352,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.853815942907168,0.530119073285941,1.16193942869518,1.24393266018445,1.51392510525377,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0,0.110293972732394,0,0,0.269662616320329,0,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0,0.984868024349589,0.234004265139238,0.445893486866185,0,0.16798212819886,0,0,0,0,1.47798971368783,2.11316241631742,0.207328115540772,0.144119953416961,0.12624243342638,0.126995788584338,0.763976851116555,1.17217447210047,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0.206768026122887,0.647142602455851,0.426910231213777,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.765676274967505,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,3.82318603571188,1.70894156152249,1.90585420366231,1.64544909234478,1.94541993357815,0,2.37937552888281,0,0,0,0,0,0,0,2.19537308576098,5.55365573383863,1.90506224451495,6.16781686521655,12.9166701932191,7.53174440809534,1.41011906195721,7.51903431270201,0.338583555603207,5.13881840331838,6.65939033730457,6.38769356535489,4.46556948182494,1.84344458585075,3.57881772627865,1.66849141711908,2.54004524022652,0,0,1.08182271390393,3.66379164797602,12.6888304579065,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2777368854449,0,2.3948309234694,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.871507708151921,0,0.384751292518985,0,0,0.987334088507493,1.4124158349861,0,0,0,0,1.41282230755522,2.16075186470203,1.80476528493745,1.56850027454192,2.68514539161348,2.08729105996604,3.33766815858795,0,0.326465616318295,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,1.37588825977293,0.870806981601766,0.65780385377567,1.06750094169172,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0.586654148204409,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0.273810757783986,3.83239764200917,0,0.262887354279314,0.558564802544508,0.916641696046735,0,0,0,0,0.0671834724867263,0,0,1.02418136999391,0.741742725430498,1.55028150864625,0.0984274815147488,0,0,0,0.482259445395058,0.412618309791701,0.415440338029185,0,0,0,0,0,0.262272940674991,0.211200673038813,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0.124192805882767,0,0,0,0.570930667089935,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0.38582807654183,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0.245772908753719,0,0,3.94759399868321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,1.27592034051333,0,0,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.131545547125698,0.118193840883968,0,0.078493092850514,0.157115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| ||
|short_description=p@chr19:703728..703761,- | |short_description=p@chr19:703728..703761,- | ||
}} | }} |
Latest revision as of 18:22, 27 July 2015
Short description: | p@chr19:703728..703761, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:703728..703761, - |
Coexpression cluster: | C1829_acute_CD133_CD34_granulocyte_chronic_biphenotypic_myelodysplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.74e-50 | 108 |
common myeloid progenitor | 4.74e-50 | 108 |
hematopoietic oligopotent progenitor cell | 1.87e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-30 | 161 |
hematopoietic stem cell | 3.56e-30 | 168 |
hematopoietic cell | 6.36e-28 | 177 |
granulocyte monocyte progenitor cell | 1.07e-18 | 67 |
myeloid lineage restricted progenitor cell | 2.46e-17 | 66 |
myeloid leukocyte | 9.79e-17 | 72 |
monopoietic cell | 1.11e-16 | 59 |
monocyte | 1.11e-16 | 59 |
monoblast | 1.11e-16 | 59 |
promonocyte | 1.11e-16 | 59 |
macrophage dendritic cell progenitor | 6.15e-16 | 61 |
classical monocyte | 9.07e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.07e-14 | 42 |
defensive cell | 6.82e-13 | 48 |
phagocyte | 6.82e-13 | 48 |
motile cell | 4.40e-09 | 386 |
mesenchymal cell | 6.76e-09 | 354 |
connective tissue cell | 1.81e-08 | 361 |
stem cell | 1.82e-07 | 441 |
hematopoietic lineage restricted progenitor cell | 1.82e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.88e-24 | 98 |
blood island | 6.88e-24 | 98 |
hemolymphoid system | 9.01e-21 | 108 |
bone marrow | 2.87e-17 | 76 |
bone element | 1.76e-15 | 82 |
immune system | 4.67e-15 | 93 |
skeletal element | 1.78e-13 | 90 |
skeletal system | 1.96e-11 | 100 |
connective tissue | 6.88e-08 | 371 |
blood | 1.56e-07 | 15 |
haemolymphatic fluid | 1.56e-07 | 15 |
organism substance | 1.56e-07 | 15 |
lateral plate mesoderm | 1.91e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.65e-56 | 31 |
leukemia | 6.25e-43 | 39 |
hematologic cancer | 6.73e-31 | 51 |
immune system cancer | 6.73e-31 | 51 |
chronic leukemia | 4.60e-11 | 8 |
organ system cancer | 7.79e-07 | 137 |