FFCP PHASE1:Hg19::chr1:1176298..1176334,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:1176298..1176334,-
|short_description=p@chr1:1176298..1176334,-
|description=CAGE_peak_at_chr1:1176298..1176334,-
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:1176298..1176334,- | |||
|description=CAGE_peak_at_chr1:1176298..1176334,- | |||
|id=chr1:1176298..1176334,- | |||
|ontology_enrichment_celltype=CL:0000192!6.72e-19!42;CL:0000514!6.72e-19!42;CL:0000183!9.94e-17!59;CL:0000187!2.35e-15!54;CL:0000680!5.33e-14!57;CL:0000056!5.33e-14!57;CL:0000355!5.33e-14!57;CL:0000393!8.63e-13!60;CL:0000211!8.63e-13!60;CL:0000055!1.80e-11!180;CL:0000359!2.65e-10!32;CL:0002620!6.43e-10!23;CL:0000057!3.17e-09!75;CL:0000222!1.33e-08!119;CL:0000220!7.23e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000192;4.18e-20;43!CL:0000359;1.51e-15;32!CL:0000187;5.10e-10;55!CL:0002539;9.95e-09;10!CL:0002598;2.08e-08;2!CL:0002600;2.84e-08;2!CL:0000182;1.64e-07;12!CL:0002595;1.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.03e-25,43;CL:0000514,1.03e-25,43;CL:0000187,4.76e-19,55;CL:0000680,8.12e-18,58;CL:0000056,8.12e-18,58;CL:0000355,8.12e-18,58;CL:0000393,1.04e-16,61;CL:0000211,1.04e-16,61;CL:0000359,4.84e-16,32;CL:0000222,2.18e-12,121;CL:0002321,3.67e-09,250;CL:0002539,6.54e-09,10;CL:0002600,1.67e-08,2;CL:0002598,2.09e-08,2;CL:0000182,1.56e-07,12;CL:0002595,2.03e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;4.18e-20;43!CL:0000355;1.86e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.80e-13;3!DOID:127;9.80e-13;3!DOID:0060072;1.21e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.86e-13,3;DOID:127,9.86e-13,3;DOID:0060072,1.21e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0005256!3.52e-20!143;UBERON:0002100!6.27e-15!216;UBERON:0000486!1.43e-13!82;UBERON:0000475!2.81e-13!365;UBERON:0002385!1.73e-12!63;UBERON:0001015!1.73e-12!63;UBERON:0000383!1.73e-12!63;UBERON:0001134!2.04e-12!61;UBERON:0002036!2.04e-12!61;UBERON:0003082!2.04e-12!61;UBERON:0000490!5.56e-12!138;UBERON:0003104!1.40e-11!238;UBERON:0009142!1.40e-11!238;UBERON:0000914!1.46e-11!83;UBERON:0002329!1.46e-11!83;UBERON:0003077!1.46e-11!83;UBERON:0003059!1.46e-11!83;UBERON:0007282!1.46e-11!83;UBERON:0009618!1.46e-11!83;UBERON:0007285!1.46e-11!83;UBERON:0004290!4.30e-11!70;UBERON:0003929!5.99e-11!54;UBERON:0003102!5.13e-10!95;UBERON:0003914!5.61e-09!118;UBERON:0002107!1.46e-08!19;UBERON:0006925!1.46e-08!19;UBERON:0008836!1.46e-08!19;UBERON:0008835!2.66e-08!22;UBERON:0003894!2.66e-08!22;UBERON:0009497!4.67e-08!25;UBERON:0000015!4.67e-08!25;UBERON:0002423!4.67e-08!25;UBERON:0006235!4.67e-08!25;UBERON:0004161!4.67e-08!25;UBERON:0001637!4.69e-08!42;UBERON:0003509!4.69e-08!42;UBERON:0004572!4.69e-08!42;UBERON:0002097!6.17e-08!40;UBERON:0009569!9.04e-08!113;UBERON:0009854!9.08e-08!23;UBERON:0004573!2.25e-07!33;UBERON:0004571!2.25e-07!33;UBERON:0005911!2.67e-07!82;UBERON:0002367!2.92e-07!11;UBERON:0010147!2.92e-07!11;UBERON:0009846!2.92e-07!11;UBERON:0003353!2.92e-07!11;UBERON:0004902!2.92e-07!11;UBERON:0003820!2.92e-07!11;UBERON:0009847!2.92e-07!11;UBERON:0002199!3.94e-07!45;UBERON:0002416!3.94e-07!45;UBERON:0007499!7.73e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.83e-10;33!UBERON:0004571;2.83e-10;33!UBERON:0004237;9.95e-09;10!UBERON:0004695;9.95e-09;10!UBERON:0002111;9.95e-09;10!UBERON:0004178;9.95e-09;10!UBERON:0003513;1.11e-08;7!UBERON:0002107;2.05e-08;19!UBERON:0006925;2.05e-08;19!UBERON:0002423;6.31e-08;25!UBERON:0005406;8.44e-08;2!UBERON:0003834;1.98e-07;5!UBERON:0001533;1.98e-07;5!UBERON:0001637;7.65e-07;42!UBERON:0003509;7.65e-07;42!UBERON:0004572;7.65e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,6.88e-19,122;UBERON:0001134,2.32e-16,62;UBERON:0002036,2.32e-16,62;UBERON:0003082,2.32e-16,62;UBERON:0002385,1.05e-15,64;UBERON:0001015,1.05e-15,64;UBERON:0000383,1.05e-15,64;UBERON:0003104,5.31e-15,160;UBERON:0009142,5.31e-15,160;UBERON:0002329,1.07e-13,71;UBERON:0003059,1.07e-13,71;UBERON:0007282,1.07e-13,71;UBERON:0004290,1.07e-13,71;UBERON:0009618,1.07e-13,71;UBERON:0007503,1.81e-13,78;UBERON:0003077,1.93e-13,72;UBERON:0007285,1.93e-13,72;UBERON:0007524,3.41e-13,73;UBERON:0000490,3.71e-13,148;UBERON:0000486,2.20e-12,83;UBERON:0001637,1.79e-11,42;UBERON:0003509,1.79e-11,42;UBERON:0004572,1.79e-11,42;UBERON:0004573,6.00e-11,33;UBERON:0004571,6.00e-11,33;UBERON:0002100,1.54e-10,199;UBERON:0003914,2.73e-09,117;UBERON:0008835,3.04e-09,22;UBERON:0003894,3.04e-09,22;UBERON:0004237,6.54e-09,10;UBERON:0004695,6.54e-09,10;UBERON:0002111,6.54e-09,10;UBERON:0004178,6.54e-09,10;UBERON:0009854,8.75e-09,23;UBERON:0003513,1.05e-08,7;UBERON:0007500,1.19e-08,59;UBERON:0001981,1.19e-08,59;UBERON:0004537,1.19e-08,59;UBERON:0006965,1.19e-08,59;UBERON:0002107,2.10e-08,19;UBERON:0006925,2.10e-08,19;UBERON:0008836,2.10e-08,19;UBERON:0005406,4.16e-08,2;UBERON:0007499,5.63e-08,25;UBERON:0009497,5.63e-08,25;UBERON:0000015,5.63e-08,25;UBERON:0002423,5.63e-08,25;UBERON:0006235,5.63e-08,25;UBERON:0004161,5.63e-08,25;UBERON:0009856,1.28e-07,26;UBERON:0003834,2.03e-07,5;UBERON:0001533,2.03e-07,5;UBERON:0000055,4.09e-07,68;UBERON:0003929,7.27e-07,54;UBERON:0002049,8.22e-07,78;UBERON:0007798,8.22e-07,78 | |||
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| ||
|short_description=p@chr1:1176298..1176334,- | |||
}} | }} |
Latest revision as of 20:10, 27 July 2015
Short description: | p@chr1:1176298..1176334, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1176298..1176334, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.03e-25 | 43 |
smooth muscle myoblast | 1.03e-25 | 43 |
muscle cell | 4.76e-19 | 55 |
muscle precursor cell | 8.12e-18 | 58 |
myoblast | 8.12e-18 | 58 |
multi-potent skeletal muscle stem cell | 8.12e-18 | 58 |
electrically responsive cell | 1.04e-16 | 61 |
electrically active cell | 1.04e-16 | 61 |
vascular associated smooth muscle cell | 4.84e-16 | 32 |
mesodermal cell | 2.18e-12 | 121 |
embryonic cell | 3.67e-09 | 250 |
aortic smooth muscle cell | 6.54e-09 | 10 |
smooth muscle cell of trachea | 1.67e-08 | 2 |
bronchial smooth muscle cell | 2.09e-08 | 2 |
hepatocyte | 1.56e-07 | 12 |
smooth muscle cell of the subclavian artery | 2.03e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.86e-13 | 3 |
leiomyoma | 9.86e-13 | 3 |
benign neoplasm | 1.21e-09 | 4 |