FFCP PHASE1:Hg19::chr1:162317723..162317724,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:162317723..162317724,+ to FFCP PHASE1:Hg19::chr1:162317723..162317724,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:162317723..162317724,+ | |||
|coexpression_cluster_id=C3894 | |||
|description=CAGE_peak_at_chr1:162317723..162317724,+ | |||
|id=chr1:162317723..162317724,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.54e-38!42;CL:0000860!1.51e-34!45;CL:0000766!7.63e-27!76;CL:0000557!1.22e-25!71;CL:0002009!9.15e-25!65;CL:0000738!6.15e-24!140;CL:0000839!2.97e-23!70;CL:0002194!5.78e-23!63;CL:0000576!5.78e-23!63;CL:0000040!5.78e-23!63;CL:0000559!5.78e-23!63;CL:0002031!3.00e-19!124;CL:0002087!1.85e-18!119;CL:0000763!2.00e-16!112;CL:0000049!2.00e-16!112;CL:0000037!2.27e-16!172;CL:0000566!2.27e-16!172;CL:0000988!8.27e-16!182;CL:0002032!1.41e-14!165;CL:0000837!1.41e-14!165;CL:0002393!2.69e-07!9;CL:0002397!2.69e-07!9;CL:0002320!3.23e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-55;33!CL:0002057;2.47e-55;33!CL:0000473;1.69e-39;39!CL:0000234;1.69e-39;39!CL:0000766;6.73e-35;69!CL:0000576;2.52e-34;48!CL:0000763;2.66e-13;100!CL:0002087;2.47e-12;104!CL:0000094;9.59e-10;8!CL:0002393;5.16e-09;6!CL:0002397;5.16e-09;6!CL:0000738;1.82e-08;136!CL:0001014;6.19e-08;2!CL:0001016;6.19e-08;2!CL:0000081;5.46e-07;11!CL:0000097;5.83e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.17e-66,42;CL:0002057,8.17e-66,42;CL:0000766,5.02e-61,72;CL:0000473,2.52e-60,48;CL:0000234,2.52e-60,48;CL:0000557,3.85e-56,67;CL:0002009,2.25e-51,61;CL:0000839,2.47e-50,66;CL:0002194,1.65e-46,59;CL:0000576,1.65e-46,59;CL:0000040,1.65e-46,59;CL:0000559,1.65e-46,59;CL:0000738,4.57e-45,136;CL:0000763,4.35e-42,108;CL:0000049,4.35e-42,108;CL:0002031,9.85e-37,120;CL:0000037,2.87e-34,168;CL:0002032,8.98e-33,161;CL:0000837,8.98e-33,161;CL:0002087,5.86e-32,115;CL:0000988,6.22e-32,177;CL:0000134,9.24e-16,354;CL:0002320,3.30e-15,361;CL:0000219,2.90e-13,386;CL:0000034,1.46e-11,441;CL:0000723,2.95e-11,433;CL:0000048,6.83e-11,427;CL:0000094,8.96e-10,8;CL:0002393,8.56e-09,9;CL:0002397,8.56e-09,9;CL:0001014,7.86e-08,2;CL:0001016,7.86e-08,2;CL:0000081,5.21e-07,11;CL:0000097,5.47e-07,5;CL:0002028,5.47e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.97e-44;42!CL:0000049;5.25e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.19e-24!102;UBERON:0003061!9.19e-24!102;UBERON:0002371!9.31e-24!80;UBERON:0002193!1.18e-22!112;UBERON:0001474!1.00e-20!86;UBERON:0002405!5.62e-18!115;UBERON:0004765!2.01e-16!101;UBERON:0001434!2.01e-16!101;UBERON:0003081!7.70e-08!216;UBERON:0002384!5.93e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.03e-48,76;UBERON:0002390,1.78e-47,98;UBERON:0003061,1.78e-47,98;UBERON:0002193,1.73e-44,108;UBERON:0001474,3.33e-44,82;UBERON:0002405,2.87e-40,93;UBERON:0004765,1.88e-39,90;UBERON:0001434,1.43e-34,100;UBERON:0003081,1.19e-18,203;UBERON:0002204,5.89e-17,167;UBERON:0002384,1.87e-14,371;UBERON:0000926,5.18e-09,315;UBERON:0004120,5.18e-09,315;UBERON:0006603,5.18e-09,315 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0,0,1.57345710739562,0,3.2511385896376,0,0,0,0,0,0.293600439334847,0.553995408531877,3.00816671205213,2.60413044859022,0,0,0,0.581592955118259,1.13362783106643,0.485168122375632,0.697287110717054,1.6446715520873,2.16794459626573,3.16461631554365,1.5369642391746,2.60130452877444,1.72372840368309,2.5819387343353,9.47985406160392,0.752969358170419,1.09162460023138,1.57306439111559,2.75475503133812,0.962787081228281,3.19668562899521,0.989553900560148,1.39624560335142,2.98357325372886,0.870627715885752,1.13477044938228,3.11411124497787,1.50749199154046,1.5644487552606,3.47502151528187,3.02699751316684,1.47311054395026,2.53169909952708,1.47878700418359,2.12604299965044,0.628975936525128,1.57260083605093,1.65194582125657,1.76798145366788,0,1.39241674039363,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,1.76171156811282,2.29363936875137,0,1.68152568894461,0.263384084775077,0.983548850569165,0,2.05601498999509,0.167186495390678,0,0,0,0.111410456885174,0.589211814949674,0.443067789167242,0.541607727530031,0.128091319725675,0,0,0,0.289803085735052,0.296573126324121,0.267540828089713,1.04535523804977,0,0,0,0.506039384039006,0,0,0.950452044448374,0,0.255973222308837,0,0,0,1.20964045934839,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,1.82032272387605,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,3.7319060797339,5.18831832301061,5.0496973370552,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0.239624855491583,0,0,0,0,0,0,1.18218456121156,0.646882724578552,0.385029108839245,0,0,0,0,0,1.49801404789436,0,2.07207756718018,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0.343143423810856,1.86091223510599,0.215714200818617,1.28073069364133,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,0,0,0,0,1.94541993357815,2.16012574895246,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0,0,0.47748896947538,0.296964680832639,0.614321404198464,0,0,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.278847488557207,0.384751292518985,0,0,0,0,0,0,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.669514372325618,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0.795229689809303,0,0,0,0,2.0247650239635,4.6428117273477,0,0,0,0.157363764404994,0.211200673038813,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0.704815022316672,0.533937062838473,1.10043013569766,0.828478110694391,0,0.197611631897944,0,0,1.08803560673895,0.7520696820681,1.83807346058077,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,1.37304041038154,0.907385542579434,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.197318320688547,0.118193840883968,0.111231401892069,0.235479278551542,0.157115589916002,0,0,0,0.47775168788705,0.214429632529969,0,0,0,0,0,0,1.38251932362818,0.4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| ||
|short_description=p@chr1:162317723..162317724,+ | |||
}} | }} |
Latest revision as of 23:42, 27 July 2015
Short description: | p@chr1:162317723..162317724, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:162317723..162317724, + |
Coexpression cluster: | C3894_CD14_immature_Eosinophils_Basophils_CD34_Mast_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.03e-48 | 76 |
hematopoietic system | 1.78e-47 | 98 |
blood island | 1.78e-47 | 98 |
hemolymphoid system | 1.73e-44 | 108 |
bone element | 3.33e-44 | 82 |
immune system | 2.87e-40 | 93 |
skeletal element | 1.88e-39 | 90 |
skeletal system | 1.43e-34 | 100 |
lateral plate mesoderm | 1.19e-18 | 203 |
musculoskeletal system | 5.89e-17 | 167 |
connective tissue | 1.87e-14 | 371 |
mesoderm | 5.18e-09 | 315 |
mesoderm-derived structure | 5.18e-09 | 315 |
presumptive mesoderm | 5.18e-09 | 315 |