FFCP PHASE1:Hg19::chr1:65532746..65532757,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:65532746..65532757,+ | |||
|coexpression_cluster_id=C1342 | |||
|description=CAGE_peak_at_chr1:65532746..65532757,+ | |||
|id=chr1:65532746..65532757,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.51e-54!140;CL:0000037!3.25e-49!172;CL:0000566!3.25e-49!172;CL:0002031!1.97e-47!124;CL:0000988!1.42e-46!182;CL:0002032!1.19e-45!165;CL:0000837!1.19e-45!165;CL:0002087!2.95e-45!119;CL:0002057!3.21e-42!42;CL:0000860!1.19e-38!45;CL:0000766!5.52e-35!76;CL:0000839!2.52e-28!70;CL:0000557!3.86e-28!71;CL:0000763!6.96e-27!112;CL:0000049!6.96e-27!112;CL:0002009!1.71e-24!65;CL:0002194!6.41e-24!63;CL:0000576!6.41e-24!63;CL:0000040!6.41e-24!63;CL:0000559!6.41e-24!63;CL:0000838!2.70e-17!52;CL:0000791!7.63e-17!18;CL:0000789!7.63e-17!18;CL:0002420!7.63e-17!18;CL:0002419!7.63e-17!18;CL:0000790!7.63e-17!18;CL:0000542!8.08e-17!53;CL:0000051!8.08e-17!53;CL:0002393!1.63e-16!9;CL:0002397!1.63e-16!9;CL:0000134!3.37e-15!358;CL:0002320!1.74e-14!365;CL:0000219!1.41e-12!390;CL:0000094!1.07e-11!8;CL:0000624!3.28e-11!6;CL:0000034!3.71e-11!444;CL:0000084!4.70e-11!25;CL:0000827!4.70e-11!25;CL:0000723!1.37e-10!436;CL:0000048!1.65e-10!430;CL:0000236!3.43e-10!14;CL:0000625!3.36e-09!11;CL:0000081!4.08e-08!11;CL:0000775!4.27e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.80e-18;13!CL:0000094;2.62e-17;8!CL:0002393;7.10e-17;6!CL:0002397;7.10e-17;6!CL:0000542;2.52e-13;53!CL:0000775;1.01e-12;3!CL:0000081;2.09e-12;11!CL:0000791;2.50e-12;18!CL:0000789;2.50e-12;18!CL:0002419;2.50e-12;18!CL:0000624;1.46e-10;6!CL:0002087;3.58e-09;104!CL:0000945;3.71e-09;24!CL:0000766;6.41e-09;69!CL:0000084;1.64e-08;25!CL:0000738;7.50e-08;136!CL:0000988;6.82e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.78e-34,136;CL:0000037,1.30e-29,168;CL:0002032,1.09e-27,161;CL:0000837,1.09e-27,161;CL:0000988,1.22e-27,177;CL:0002087,6.54e-25,115;CL:0002031,2.29e-23,120;CL:0000838,1.05e-17,52;CL:0000094,2.42e-17,8;CL:0000542,2.72e-17,53;CL:0000051,2.72e-17,53;CL:0000236,4.39e-17,14;CL:0000766,2.59e-16,72;CL:0002393,9.42e-16,9;CL:0002397,9.42e-16,9;CL:0000775,6.27e-13,3;CL:0000791,1.30e-12,18;CL:0000789,1.30e-12,18;CL:0002420,1.30e-12,18;CL:0002419,1.30e-12,18;CL:0000790,1.30e-12,18;CL:0000081,1.97e-12,11;CL:0000763,9.57e-12,108;CL:0000049,9.57e-12,108;CL:0000860,7.58e-11,42;CL:0002057,7.58e-11,42;CL:0000624,8.35e-11,6;CL:0000945,2.17e-09,24;CL:0000826,2.17e-09,24;CL:0000557,2.98e-09,67;CL:0000134,3.28e-09,354;CL:0000473,3.57e-09,48;CL:0000234,3.57e-09,48;CL:0002320,7.42e-09,361;CL:0000084,1.04e-08,25;CL:0000827,1.04e-08,25;CL:0000839,4.04e-08,66;CL:0000219,1.30e-07,386;CL:0002194,7.53e-07,59;CL:0000576,7.53e-07,59;CL:0000040,7.53e-07,59;CL:0000559,7.53e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000051;2.52e-13;53!CL:0000790;2.50e-12;18!CL:0002057;5.15e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.06e-37!102;UBERON:0003061!5.06e-37!102;UBERON:0002193!2.85e-32!112;UBERON:0002371!3.44e-25!80;UBERON:0001474!6.98e-24!86;UBERON:0004765!1.48e-18!101;UBERON:0001434!1.48e-18!101;UBERON:0002405!6.54e-17!115;UBERON:0002384!1.62e-13!375;UBERON:0000178!1.66e-12!15;UBERON:0000179!1.66e-12!15;UBERON:0000463!1.66e-12!15;UBERON:0003081!2.37e-11!216;UBERON:0002204!1.69e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.77e-08;15!UBERON:0000179;1.77e-08;15!UBERON:0000463;1.77e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.72e-13,98;UBERON:0003061,2.72e-13,98;UBERON:0002193,1.35e-11,108;UBERON:0000178,1.78e-08,15;UBERON:0000179,1.78e-08,15;UBERON:0000463,1.78e-08,15;UBERON:0002384,2.26e-08,371;UBERON:0002371,8.59e-08,76;UBERON:0001474,5.31e-07,82;UBERON:0002405,8.05e-07,93 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.15148819429164,0.77408061658038,0,0,0,0,0,0.880801318004542,6.09394949385065,9.02450013615638,7.81239134577067,0,0,0,0.726991193897824,0.755751887377619,0.242584061187816,0,0.822335776043652,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0.659702600373432,0.398927315243264,0.426224750532694,1.45104619314292,0.56738522469114,1.86846674698672,0.251248665256743,0,0,1.21079900526674,2.20966581592539,1.26584954976354,0.845021145247767,1.4882300997553,1.67726916406701,0.44931452458598,1.05123824989054,0.964353520182481,0.285012743741249,0.79566670879636,1.27864907635244,0,2.18455444504853,1.77901850772711,0.426730222566507,1.60158394814405,1.14950487990897,0,2.86216126360609,3.98449078376614,1.76171156811282,1.91136614062614,0,3.36305137788922,0.526768169550154,1.37696839079683,1.96505381374582,0.616804496998528,0,1.30368906653436,2.36723902867367,0,0,0.294605907474837,0.221533894583621,1.08321545506006,0,0,0,0.552700035571697,0,0,1.07016331235885,1.04535523804977,0,3.06576394881537,1.03088233644789,1.26509846009751,0,0,1.90090408889675,0.301150238155546,0.383959833463255,1.24930726552346,0.236777252044017,0,0.403213486449465,1.87208137048455,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,1.00883967391873,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,1.28343036279748,0.254094624222463,0,0,0,0,1.49801404789436,2.99161459204025,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.72571360654893,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0.714695326373367,0,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33151354837103,0,0 | |||
|short_description=p@chr1:65532746..65532757,+ | |||
}} |
Latest revision as of 09:48, 28 July 2015
Short description: | p@chr1:65532746..65532757, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:65532746..65532757, + |
Coexpression cluster: | C1342_CD14_CD19_Eosinophils_Neutrophils_Peripheral_Natural_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.72e-13 | 98 |
blood island | 2.72e-13 | 98 |
hemolymphoid system | 1.35e-11 | 108 |
blood | 1.78e-08 | 15 |
haemolymphatic fluid | 1.78e-08 | 15 |
organism substance | 1.78e-08 | 15 |
connective tissue | 2.26e-08 | 371 |
bone marrow | 8.59e-08 | 76 |
bone element | 5.31e-07 | 82 |
immune system | 8.05e-07 | 93 |