FFCP PHASE1:Hg19::chr20:26116667..26116670,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:26116667..26116670,+ | |||
|coexpression_cluster_id=C330 | |coexpression_cluster_id=C330 | ||
|description=CAGE_peak_at_chr20:26116667..26116670,+ | |description=CAGE_peak_at_chr20:26116667..26116670,+ | ||
|id=chr20:26116667..26116670,+ | |id=chr20:26116667..26116670,+ | ||
|ontology_enrichment_celltype=CL:0002553!9.44e-08!1;CL:0000319!1.22e-07!1;CL:0002127!2.98e-07!1;CL:0000914!2.98e-07!1;CL:0000911!2.98e-07!1;CL:0000814!2.98e-07!1;CL:0002042!2.98e-07!1;CL:0002039!2.98e-07!1;CL:0002040!2.98e-07!1;CL:0002041!2.98e-07!1 | |ontology_enrichment_celltype=CL:0002553!9.44e-08!1;CL:0000319!1.22e-07!1;CL:0002127!2.98e-07!1;CL:0000914!2.98e-07!1;CL:0000911!2.98e-07!1;CL:0000814!2.98e-07!1;CL:0002042!2.98e-07!1;CL:0002039!2.98e-07!1;CL:0002040!2.98e-07!1;CL:0002041!2.98e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000054;1.80e-10;2!CL:0000137;1.80e-10;2!CL:0000092;1.80e-10;2!CL:0000082;2.70e-09;19!CL:0000322;1.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.72e-10,2;CL:0000137,1.72e-10,2;CL:0000092,1.72e-10,2;CL:0000082,2.73e-09,19;CL:0000322,1.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.67e-16!235;DOID:14566!2.37e-15!239;DOID:1036!8.52e-13!8;DOID:0050686!4.27e-11!137;DOID:0050615!5.42e-10!16;DOID:1325!3.91e-09!7;DOID:3904!3.91e-09!7;DOID:2531!1.70e-08!51;DOID:0060083!1.70e-08!51;DOID:0050687!4.70e-08!143;DOID:0060085!4.89e-08!1;DOID:3165!4.89e-08!1;DOID:0060121!4.89e-08!1;DOID:2438!4.89e-08!1;DOID:4418!4.89e-08!1;DOID:1115!9.64e-08!20;DOID:3030!1.22e-07!1;DOID:5409!1.44e-07!4;DOID:305!1.45e-07!106;DOID:0050619!1.80e-07!1;DOID:1357!1.80e-07!1;DOID:3112!2.47e-07!1;DOID:3905!3.40e-07!9;DOID:1324!3.41e-07!15;DOID:1240!6.22e-07!39 | |ontology_enrichment_disease=DOID:162!8.67e-16!235;DOID:14566!2.37e-15!239;DOID:1036!8.52e-13!8;DOID:0050686!4.27e-11!137;DOID:0050615!5.42e-10!16;DOID:1325!3.91e-09!7;DOID:3904!3.91e-09!7;DOID:2531!1.70e-08!51;DOID:0060083!1.70e-08!51;DOID:0050687!4.70e-08!143;DOID:0060085!4.89e-08!1;DOID:3165!4.89e-08!1;DOID:0060121!4.89e-08!1;DOID:2438!4.89e-08!1;DOID:4418!4.89e-08!1;DOID:1115!9.64e-08!20;DOID:3030!1.22e-07!1;DOID:5409!1.44e-07!4;DOID:305!1.45e-07!106;DOID:0050619!1.80e-07!1;DOID:1357!1.80e-07!1;DOID:3112!2.47e-07!1;DOID:3905!3.40e-07!9;DOID:1324!3.41e-07!15;DOID:1240!6.22e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1325;4.30e-24;7!DOID:3904;4.30e-24;7!DOID:0060085;1.42e-19;1!DOID:3165;1.42e-19;1!DOID:0060121;1.42e-19;1!DOID:2438;1.42e-19;1!DOID:4418;1.42e-19;1!DOID:5409;3.74e-19;4!DOID:3905;6.60e-19;9!DOID:1324;1.30e-11;15!DOID:0050615;6.30e-11;16!DOID:3910;1.43e-10;2!DOID:200;1.80e-10;2!DOID:4305;1.80e-10;2!DOID:154;3.27e-10;2!DOID:4236;3.27e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,4.48e-24,7;DOID:3904,4.48e-24,7;DOID:0060085,1.30e-19,1;DOID:3165,1.30e-19,1;DOID:0060121,1.30e-19,1;DOID:2438,1.30e-19,1;DOID:4418,1.30e-19,1;DOID:5409,3.92e-19,4;DOID:3905,6.80e-19,9;DOID:1324,1.32e-11,15;DOID:0050615,6.41e-11,16;DOID:3910,1.43e-10,2;DOID:200,1.72e-10,2;DOID:4305,1.72e-10,2;DOID:154,3.58e-10,2;DOID:4236,3.58e-10,2;DOID:162,5.67e-07,235;DOID:14566,8.24e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.80e-07!1;UBERON:0001825!1.80e-07!1 | |ontology_enrichment_uberon=UBERON:0001764!1.80e-07!1;UBERON:0001825!1.80e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.43e-10;2!UBERON:0002173;1.43e-10;2!UBERON:0002186;1.43e-10;2!UBERON:0004802;2.70e-09;19!UBERON:0000115;2.70e-09;19!UBERON:0002048;4.18e-08;22!UBERON:0004807;4.18e-08;22!UBERON:0000117;4.18e-08;22!UBERON:0000171;4.18e-08;22!UBERON:0000170;4.18e-08;22!UBERON:0004821;1.82e-07;3!UBERON:0007499;1.82e-07;3!UBERON:0003215;1.82e-07;3!UBERON:0010368;1.82e-07;3!UBERON:0009911;1.82e-07;3!UBERON:0002299;1.82e-07;3!UBERON:0006524;1.82e-07;3!UBERON:0008874;1.82e-07;3!UBERON:0002169;1.82e-07;3!UBERON:0004894;1.82e-07;3!UBERON:0002106;3.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.43e-10,2;UBERON:0002173,1.43e-10,2;UBERON:0002186,1.43e-10,2;UBERON:0004802,2.73e-09,19;UBERON:0000115,2.73e-09,19;UBERON:0002048,4.23e-08,22;UBERON:0000117,4.23e-08,22;UBERON:0000171,4.23e-08,22;UBERON:0000170,4.23e-08,22;UBERON:0005597,4.23e-08,22;UBERON:0000118,4.23e-08,22;UBERON:0004821,1.82e-07,3;UBERON:0003215,1.82e-07,3;UBERON:0010368,1.82e-07,3;UBERON:0009911,1.82e-07,3;UBERON:0002299,1.82e-07,3;UBERON:0006524,1.82e-07,3;UBERON:0008874,1.82e-07,3;UBERON:0002169,1.82e-07,3;UBERON:0004894,1.82e-07,3;UBERON:0002106,2.97e-07,3;UBERON:0004854,2.97e-07,3;UBERON:0009034,2.97e-07,3;UBERON:0002095,2.97e-07,3;UBERON:0004782,2.97e-07,3;UBERON:0003281,2.97e-07,3;UBERON:0009664,2.97e-07,3;UBERON:0002296,2.97e-07,3;UBERON:0005602,2.97e-07,3;UBERON:0001179,2.97e-07,3;UBERON:0006293,2.97e-07,3 | |||
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|short_description=p@chr20:26116667..26116670,+ | |short_description=p@chr20:26116667..26116670,+ | ||
}} | }} |
Latest revision as of 12:44, 28 July 2015
Short description: | p@chr20:26116667..26116670, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:26116667..26116670, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.72e-10 | 2 |
osteocyte | 1.72e-10 | 2 |
osteoclast | 1.72e-10 | 2 |
epithelial cell of lung | 2.73e-09 | 19 |
pneumocyte | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.43e-10 | 2 |
alveolar duct | 1.43e-10 | 2 |
bronchiole | 1.43e-10 | 2 |
respiratory tract epithelium | 2.73e-09 | 19 |
lung epithelium | 2.73e-09 | 19 |
lung | 4.23e-08 | 22 |
respiratory tube | 4.23e-08 | 22 |
respiration organ | 4.23e-08 | 22 |
pair of lungs | 4.23e-08 | 22 |
lung primordium | 4.23e-08 | 22 |
lung bud | 4.23e-08 | 22 |
pulmonary alveolus epithelium | 1.82e-07 | 3 |
alveolus | 1.82e-07 | 3 |
pulmonary lobule | 1.82e-07 | 3 |
lobule | 1.82e-07 | 3 |
alveolus of lung | 1.82e-07 | 3 |
alveolar system | 1.82e-07 | 3 |
pulmonary acinus | 1.82e-07 | 3 |
alveolar sac | 1.82e-07 | 3 |
alveolar wall | 1.82e-07 | 3 |
spleen | 2.97e-07 | 3 |
gastrointestinal system mesentery | 2.97e-07 | 3 |
stomach region | 2.97e-07 | 3 |
mesentery | 2.97e-07 | 3 |
gastrointestinal system serosa | 2.97e-07 | 3 |
mesentery of stomach | 2.97e-07 | 3 |
gut mesentery | 2.97e-07 | 3 |
dorsal mesentery | 2.97e-07 | 3 |
dorsal mesogastrium | 2.97e-07 | 3 |
peritoneal cavity | 2.97e-07 | 3 |
spleen primordium | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 4.48e-24 | 7 |
bronchogenic carcinoma | 4.48e-24 | 7 |
organ system benign neoplasm | 1.30e-19 | 1 |
skin benign neoplasm | 1.30e-19 | 1 |
integumentary system benign neoplasm | 1.30e-19 | 1 |
dermis tumor | 1.30e-19 | 1 |
cutaneous fibrous histiocytoma | 1.30e-19 | 1 |
lung small cell carcinoma | 3.92e-19 | 4 |
lung carcinoma | 6.80e-19 | 9 |
lung cancer | 1.32e-11 | 15 |
respiratory system cancer | 6.41e-11 | 16 |
lung adenocarcinoma | 1.43e-10 | 2 |
giant cell tumor | 1.72e-10 | 2 |
bone giant cell tumor | 1.72e-10 | 2 |
mixed cell type cancer | 3.58e-10 | 2 |
carcinosarcoma | 3.58e-10 | 2 |
cancer | 5.67e-07 | 235 |
disease of cellular proliferation | 8.24e-07 | 239 |