FFCP PHASE1:Hg19::chr20:36767860..36767871,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:36767860..36767871,-
|short_description=p@chr20:36767860..36767871,-
|description=CAGE_peak_at_chr20:36767860..36767871,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:36767860..36767871,- | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36767860..36767871,- | |||
|id=chr20:36767860..36767871,- | |||
|ontology_enrichment_celltype=CL:0000115!3.08e-08!35;CL:0002078!5.19e-07!44;CL:0002139!5.23e-07!24;CL:0000192!7.49e-07!42;CL:0000514!7.49e-07!42;CL:0000222!8.26e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002536;4.03e-14;2!CL:0002595;5.33e-13;5!CL:0002188;2.08e-12;5!CL:0000349;3.34e-12;19!CL:0002577;4.78e-10;3!CL:0000064;1.02e-09;3!CL:0000067;1.02e-09;3!CL:0005012;1.02e-09;3!CL:0002304;1.02e-09;3!CL:0000359;1.51e-09;32!CL:1000746;5.22e-09;7!CL:1000612;5.22e-09;7!CL:0002379;2.90e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,5.65e-14,2;CL:0002595,7.38e-13,5;CL:0002188,1.85e-12,5;CL:0000349,3.70e-12,19;CL:0002577,3.65e-10,3;CL:0000064,6.28e-10,3;CL:0000067,6.28e-10,3;CL:0005012,6.28e-10,3;CL:0002304,6.28e-10,3;CL:0000359,1.24e-09,32;CL:1000746,4.81e-09,7;CL:1000612,4.81e-09,7;CL:0002379,3.34e-08,1;CL:0000192,5.97e-07,43;CL:0000514,5.97e-07,43;CL:0000222,6.83e-07,121 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.90e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.90e-08;1!DOID:3565;2.90e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.34e-08,1;DOID:3565,3.34e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003914!9.02e-17!118;UBERON:0002049!2.63e-14!79;UBERON:0007798!2.63e-14!79;UBERON:0004872!4.95e-14!84;UBERON:0000055!5.91e-14!69;UBERON:0005631!1.45e-13!14;UBERON:0000158!1.45e-13!14;UBERON:0001981!1.72e-12!60;UBERON:0007500!1.72e-12!60;UBERON:0004537!1.72e-12!60;UBERON:0006965!1.72e-12!60;UBERON:0001009!2.67e-12!113;UBERON:0004535!1.03e-10!110;UBERON:0004111!1.20e-10!241;UBERON:0000477!1.52e-10!286;UBERON:0000478!4.28e-10!24;UBERON:0001637!2.22e-09!42;UBERON:0003509!2.22e-09!42;UBERON:0004572!2.22e-09!42;UBERON:0000468!2.41e-09!659;UBERON:0000490!2.51e-09!138;UBERON:0000467!9.93e-09!625;UBERON:0003124!1.08e-08!7;UBERON:0000480!1.20e-08!626;UBERON:0000025!1.66e-08!194;UBERON:0000483!7.29e-08!309;UBERON:0000119!1.42e-07!312;UBERON:0005256!2.12e-07!143;UBERON:0003103!5.14e-07!69;UBERON:0004573!8.31e-07!33;UBERON:0004571!8.31e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;5.52e-16;7!UBERON:0003834;5.33e-13;5!UBERON:0001533;5.33e-13;5!UBERON:0000478;6.52e-13;24!UBERON:0005631;7.56e-11;10!UBERON:0000158;7.56e-11;10!UBERON:0001778;1.02e-09;3!UBERON:0001775;1.02e-09;3!UBERON:0000305;5.22e-09;7!UBERON:0000074;5.22e-09;7!UBERON:0001229;5.22e-09;7!UBERON:0001637;5.76e-09;42!UBERON:0003509;5.76e-09;42!UBERON:0004572;5.76e-09;42!UBERON:0004573;1.73e-08;33!UBERON:0004571;1.73e-08;33!UBERON:0001987;9.62e-08;4!UBERON:0000488;1.69e-07;4!UBERON:0000353;2.85e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.12e-16,14;UBERON:0000158,1.12e-16,14;UBERON:0003513,7.82e-16,7;UBERON:0000478,7.17e-13,24;UBERON:0003834,7.38e-13,5;UBERON:0001533,7.38e-13,5;UBERON:0001637,1.42e-11,42;UBERON:0003509,1.42e-11,42;UBERON:0004572,1.42e-11,42;UBERON:0003914,1.77e-11,117;UBERON:0004872,2.89e-11,83;UBERON:0002049,3.42e-10,78;UBERON:0007798,3.42e-10,78;UBERON:0001778,6.28e-10,3;UBERON:0001775,6.28e-10,3;UBERON:0007500,9.92e-10,59;UBERON:0001981,9.92e-10,59;UBERON:0004537,9.92e-10,59;UBERON:0006965,9.92e-10,59;UBERON:0003124,1.84e-09,7;UBERON:0004573,2.57e-09,33;UBERON:0004571,2.57e-09,33;UBERON:0003081,3.68e-09,203;UBERON:0010532,4.81e-09,7;UBERON:0000074,4.81e-09,7;UBERON:0001229,4.81e-09,7;UBERON:0001230,4.81e-09,7;UBERON:0003220,4.81e-09,7;UBERON:0005749,4.81e-09,7;UBERON:0004199,4.81e-09,7;UBERON:0004209,4.81e-09,7;UBERON:0004198,4.81e-09,7;UBERON:0001009,4.96e-09,112;UBERON:0000305,7.49e-09,7;UBERON:0000055,3.21e-08,68;UBERON:0005103,5.68e-08,8;UBERON:0000083,5.68e-08,8;UBERON:0009201,5.68e-08,8;UBERON:0006553,5.68e-08,8;UBERON:0003074,5.68e-08,8;UBERON:0003060,5.68e-08,8;UBERON:0004535,5.87e-08,109;UBERON:0001987,7.87e-08,4;UBERON:0004340,7.87e-08,4;UBERON:0004871,8.35e-08,8;UBERON:0000488,1.18e-07,4;UBERON:0000353,2.76e-07,15;UBERON:0000080,3.90e-07,9;UBERON:0002120,3.90e-07,9;UBERON:0004875,3.90e-07,9;UBERON:0005721,3.90e-07,9;UBERON:0005754,3.90e-07,9;UBERON:0007297,3.90e-07,9;UBERON:0007503,5.98e-07,78;UBERON:0005256,7.30e-07,122 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0.872338524100369,0,0,0,0,1.39560233594486,1.09220686065086,1.31883489114227,0,0,3.36162573225888,1.80808358407193,0.730310090387373,0,0,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,1.33037638477538,1.93236528524877,0,0,0,0,0,0.398873881556595,0,0,0,0.198762407366705,0,0,0.56530794192401,1.25849830862972,1.10047216776027,0.208994966536811,0,0,0.33472061276467,0,0,0.732186172644509,0,0,0.357198913136319,0.22452937262617,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0,0,1.72667283892012,0,0.404132016209064,0.653847612453835,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,2.21446636387394,0,0,0,0,3.9313088667105,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0.445893486866185,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0,1.06617584622764,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.831883446123229,1.24900292158013,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,3.93107381328584,0,0.460385919864187,0,0,0,0.482561763430822,0,0.308419387605311,0.177561725313127,0,0,0,0,0.802025881213139,0,0.114814448164607,0.546273504020151,0.655622074797121,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0.431831832204279,1.54227252690289,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0.929691098594572,1.25924938732256,0,0,0,0,0.74129687641568,0,0,0,0,0,0.42793898803392,0,0,0,0.823611089208164,0.471249609382746,0.404364963146632,7.92551605865041,0.421258456238981,0,0.731140468893853,1.05650146756755,0,0.707027159768564,0,0,3.98063385144732,3.5076070820301,0,0,0,0.92947049429925,0.563391205064483,0,0.196498082026242,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.71623345421307,0.593929361665277,0.614321404198464,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.638002319463839,0.457987967009312,2.66517388009317,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0.0882561266915003,0.451961481561065,0.274083849293502,0,0,0,0,0.426905989478705,0.799238438328521,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0.998395002494955,1.28767814440971,0.223171457441873,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,2.5926644736038,0.326587360109409,0,0,0,0.566560457600628,0.293104467356165,0,0,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0,0,2.11739237728355,0,0,0,0,0,0.378806010550178,0,0,0,0,0.15543720058278,0.73927574994817,0.318593534327405,0,0,0,0.265841714557995,0,0,0,0,0.545545977607678,0.429642228169954,0,1.59238355479446,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0.709618961301111,0.115233987555779,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,2.34640942403454,0.122241444182866,0.813792356631477,0,0,0 | |phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0.872338524100369,0,0,0,0,1.39560233594486,1.09220686065086,1.31883489114227,0,0,3.36162573225888,1.80808358407193,0.730310090387373,0,0,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,1.33037638477538,1.93236528524877,0,0,0,0,0,0.398873881556595,0,0,0,0.198762407366705,0,0,0.56530794192401,1.25849830862972,1.10047216776027,0.208994966536811,0,0,0.33472061276467,0,0,0.732186172644509,0,0,0.357198913136319,0.22452937262617,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0,0,1.72667283892012,0,0.404132016209064,0.653847612453835,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,2.21446636387394,0,0,0,0,3.9313088667105,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0.445893486866185,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0,1.06617584622764,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.831883446123229,1.24900292158013,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,3.93107381328584,0,0.460385919864187,0,0,0,0.482561763430822,0,0.308419387605311,0.177561725313127,0,0,0,0,0.802025881213139,0,0.114814448164607,0.546273504020151,0.655622074797121,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0.431831832204279,1.54227252690289,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0.929691098594572,1.25924938732256,0,0,0,0,0.74129687641568,0,0,0,0,0,0.42793898803392,0,0,0,0.823611089208164,0.471249609382746,0.404364963146632,7.92551605865041,0.421258456238981,0,0.731140468893853,1.05650146756755,0,0.707027159768564,0,0,3.98063385144732,3.5076070820301,0,0,0,0.92947049429925,0.563391205064483,0,0.196498082026242,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.71623345421307,0.593929361665277,0.614321404198464,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.638002319463839,0.457987967009312,2.66517388009317,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0.0882561266915003,0.451961481561065,0.274083849293502,0,0,0,0,0.426905989478705,0.799238438328521,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0.998395002494955,1.28767814440971,0.223171457441873,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,2.5926644736038,0.326587360109409,0,0,0,0.566560457600628,0.293104467356165,0,0,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0,0,2.11739237728355,0,0,0,0,0,0.378806010550178,0,0,0,0,0.15543720058278,0.73927574994817,0.318593534327405,0,0,0,0.265841714557995,0,0,0,0,0.545545977607678,0.429642228169954,0,1.59238355479446,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0.709618961301111,0.115233987555779,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,2.34640942403454,0.122241444182866,0.813792356631477,0,0,0 | ||
|short_description=p@chr20:36767860..36767871,- | |||
}} | }} |
Latest revision as of 13:50, 28 July 2015
Short description: | p@chr20:36767860..36767871, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36767860..36767871, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 5.65e-14 | 2 |
smooth muscle cell of the subclavian artery | 7.38e-13 | 5 |
glomerular endothelial cell | 1.85e-12 | 5 |
extraembryonic cell | 3.70e-12 | 19 |
placental epithelial cell | 3.65e-10 | 3 |
ciliated cell | 6.28e-10 | 3 |
ciliated epithelial cell | 6.28e-10 | 3 |
multi-ciliated epithelial cell | 6.28e-10 | 3 |
non-pigmented ciliary epithelial cell | 6.28e-10 | 3 |
vascular associated smooth muscle cell | 1.24e-09 | 32 |
glomerular cell | 4.81e-09 | 7 |
kidney corpuscule cell | 4.81e-09 | 7 |
meningothelial cell | 3.34e-08 | 1 |
smooth muscle cell | 5.97e-07 | 43 |
smooth muscle myoblast | 5.97e-07 | 43 |
mesodermal cell | 6.83e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.34e-08 | 1 |
meningioma | 3.34e-08 | 1 |