FFCP PHASE1:Hg19::chr21:47404201..47404227,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:47404201..47404227,-
|short_description=p@chr21:47404201..47404227,-
|description=CAGE_peak_at_chr21:47404201..47404227,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:47404201..47404227,- | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47404201..47404227,- | |||
|id=chr21:47404201..47404227,- | |||
|ontology_enrichment_celltype=CL:0000055!1.52e-36!180;CL:0000057!4.64e-21!75;CL:0000183!1.91e-14!59;CL:0000680!2.98e-14!57;CL:0000056!2.98e-14!57;CL:0000355!2.98e-14!57;CL:0000393!2.64e-13!60;CL:0000211!2.64e-13!60;CL:0000187!2.97e-13!54;CL:0000048!2.54e-12!430;CL:0000723!1.00e-11!436;CL:0000034!3.60e-11!444;CL:0002620!5.14e-11!23;CL:0000192!3.89e-09!42;CL:0000514!3.89e-09!42;CL:0002371!4.13e-08!591;CL:0000144!6.64e-07!625;CL:0000327!7.47e-07!14;CL:0000499!7.50e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002570;4.76e-10;8!CL:0002559;6.16e-09;5!CL:0000187;1.11e-08;55!CL:0000188;1.85e-08;9!CL:0000327;3.39e-08;15!CL:0000393;3.80e-08;61!CL:0000211;3.80e-08;61!CL:0000499;5.60e-08;28!CL:0000192;1.07e-07;43!CL:0002620;2.09e-07;23!CL:0000135;6.94e-07;3!CL:0000388;6.94e-07;3!CL:0000723;8.80e-07;61!CL:0002551;9.87e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,2.02e-14,55;CL:0000680,2.83e-13,58;CL:0000056,2.83e-13,58;CL:0000355,2.83e-13,58;CL:0000057,1.14e-12,76;CL:0000048,1.34e-12,427;CL:0000393,3.01e-12,61;CL:0000211,3.01e-12,61;CL:0000723,4.37e-12,433;CL:0000034,1.99e-11,441;CL:0002570,4.11e-10,8;CL:0000192,5.16e-10,43;CL:0000514,5.16e-10,43;CL:0002559,4.20e-09,5;CL:0000188,1.70e-08,9;CL:0000327,3.08e-08,15;CL:0000499,4.49e-08,28;CL:0002320,1.57e-07,361;CL:0002620,3.62e-07,23;CL:0000135,7.32e-07,3;CL:0000388,7.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-07;43!CL:0000355;2.70e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!4.78e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.44e-19!83;UBERON:0002329!5.44e-19!83;UBERON:0003077!5.44e-19!83;UBERON:0003059!5.44e-19!83;UBERON:0007282!5.44e-19!83;UBERON:0009618!5.44e-19!83;UBERON:0007285!5.44e-19!83;UBERON:0004290!2.00e-18!70;UBERON:0000486!3.81e-16!82;UBERON:0005256!2.68e-15!143;UBERON:0001134!2.76e-13!61;UBERON:0002036!2.76e-13!61;UBERON:0003082!2.76e-13!61;UBERON:0002385!3.44e-13!63;UBERON:0001015!3.44e-13!63;UBERON:0000383!3.44e-13!63;UBERON:0002199!2.33e-11!45;UBERON:0002416!2.33e-11!45;UBERON:0001013!3.39e-09!14;UBERON:0003102!6.55e-09!95;UBERON:0002097!1.05e-08!40;UBERON:0002067!1.39e-07!9;UBERON:0004016!1.39e-07!9;UBERON:0010083!1.39e-07!9;UBERON:0002100!3.24e-07!216;UBERON:0000475!6.11e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;6.15e-15;14!UBERON:0002067;4.22e-11;9!UBERON:0004905;8.02e-10;8!UBERON:0000982;8.02e-10;8!UBERON:0004770;8.02e-10;8!UBERON:0002073;6.16e-09;5!UBERON:0011135;7.85e-09;5!UBERON:0002216;7.85e-09;5!UBERON:0011134;7.85e-09;5!UBERON:0002209;7.85e-09;5!UBERON:0002213;7.85e-09;5!UBERON:0007844;7.85e-09;5!UBERON:0011138;7.85e-09;5!UBERON:0001130;7.85e-09;5!UBERON:0001066;7.85e-09;5!UBERON:0001468;7.85e-09;5!UBERON:0002199;3.27e-08;46!UBERON:0002416;3.27e-08;46!UBERON:0002385;5.97e-08;31!UBERON:0001015;5.97e-08;31!UBERON:0000383;5.97e-08;31!UBERON:0005284;6.76e-08;5!UBERON:0003102;3.90e-07;50!UBERON:0007846;6.94e-07;3!UBERON:0000043;6.94e-07;3!UBERON:0007845;6.94e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.00e-20,73;UBERON:0002329,5.30e-20,71;UBERON:0003059,5.30e-20,71;UBERON:0007282,5.30e-20,71;UBERON:0004290,5.30e-20,71;UBERON:0009618,5.30e-20,71;UBERON:0003077,1.42e-19,72;UBERON:0007285,1.42e-19,72;UBERON:0000486,5.55e-18,83;UBERON:0007503,3.03e-17,78;UBERON:0001013,3.83e-15,14;UBERON:0003104,2.17e-14,160;UBERON:0009142,2.17e-14,160;UBERON:0005256,7.35e-14,122;UBERON:0001134,4.94e-13,62;UBERON:0002036,4.94e-13,62;UBERON:0003082,4.94e-13,62;UBERON:0002385,2.22e-12,64;UBERON:0001015,2.22e-12,64;UBERON:0000383,2.22e-12,64;UBERON:0002199,2.75e-11,46;UBERON:0002416,2.75e-11,46;UBERON:0002067,5.72e-11,9;UBERON:0004016,5.72e-11,9;UBERON:0010083,5.72e-11,9;UBERON:0000490,4.59e-10,148;UBERON:0004905,5.39e-10,8;UBERON:0000982,5.39e-10,8;UBERON:0004770,5.39e-10,8;UBERON:0002073,4.20e-09,5;UBERON:0005086,4.20e-09,5;UBERON:0011135,7.32e-09,5;UBERON:0002216,7.32e-09,5;UBERON:0011134,7.32e-09,5;UBERON:0002209,7.32e-09,5;UBERON:0002213,7.32e-09,5;UBERON:0005856,7.32e-09,5;UBERON:0005866,7.32e-09,5;UBERON:0005863,7.32e-09,5;UBERON:0007844,7.32e-09,5;UBERON:0011138,7.32e-09,5;UBERON:0001130,7.32e-09,5;UBERON:0001066,7.32e-09,5;UBERON:0001468,7.32e-09,5;UBERON:0002097,4.03e-08,41;UBERON:0005284,1.13e-07,5;UBERON:0002384,2.50e-07,371;UBERON:0007846,7.32e-07,3;UBERON:0000043,7.32e-07,3;UBERON:0007845,7.32e-07,3;UBERON:0002204,9.37e-07,167 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,2.68176656656373,1.74467704820074,2.53299878168311,1.26343974685366,2.87304191019822,0,0.697801167972428,0,0.263766978228454,1.8564952944007,8.28493439319789,2.6893005858071,2.41077811209591,2.92124036154949,3.41552959153355,0.123121058076788,1.63200552995402,2.82109249330279,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,3.2529523714611,2.00535164254356,2.17269778441236,0,2.43317435151318,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.397227542439656,1.43418310374407,0,0.560677600142307,0,1.72667283892012,0.311211035399766,0.808264032418128,0.980771418680752,1.36221684880438,8.06646294271999,0.234321431833797,1.87296046098192,1.1409436430889,4.78235777765763,0.704606991862589,2.26622122115384,1.12360645361799,0.204154171254893,1.10550885580591,0.826606249406124,0,0.989067717114227,0,4.31170885089743,0,0.125118519871964,0,0.877955241761676,2.75839016219118,2.55404700141215,0.113432183160021,0.358779271377724,1.49490172172997,2.54318281391474,3.00091096084402,0.103052529238439,1.03056216018252,0.744467425326359,1.0126579934476,0.0974370051611986,1.51460264546469,0.920498986422993,0.969876340912871,1.42003837006646,0.503760491138201,0.508681776931463,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0.36497735907583,3.12899064659632,9.64861407289328,1.38134921352481,1.85747171212792,3.60939740834793,0,0,0,0.110293972732394,0,0,0,0,0,0,0,3.7041661019826,4.41026134156626,0,0,1.77236972004421,0,0,0,0,0,0,0.0925884451585296,0,4.15973914111831,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.514137463516618,0,0,0.224262168690721,0.43596006883328,0.5867062865676,0.646358578788889,0,5.917119267892,0.531876233169741,1.04007436911366,0.257207374262142,0,0.532844358032199,1.71573592389777,3.7983512377401,0,1.62868092146868,1.77695974371273,0.791951872933429,0.301439377059586,0,0,0,0,0,0.718874566474748,3.44585807502342,0,0.868687840005475,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,1.10422342547226,2.50085260529839,4.88277042659524,2.28767947683888,1.07057393278297,0.946214490203608,0.468565659970853,0,0,2.0694614258501,1.99267679560631,1.10621501125022,0.260650843404249,1.56640925970192,4.46086450954113,0,0,0,0,0,0.604780586659361,0.248107807818777,0.153461973288062,0.561320188866147,0.256278298511402,1.53512174720011,0.804269605718038,1.48418066444991,0.462629081407967,5.85953693533319,0.739144404124282,0,6.39157081529776,0,0,0,0.459257792658427,0.728364672026868,1.83574180943194,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0.650060246036521,1.6068392984416,2.61010939388729,2.7728751080636,2.45605879561807,1.92971201478343,0.751941714077915,2.0302337147992,1.27839941124151,2.22580089116843,0,0,0,0,0.464845549297286,0.31481234683064,0,1.54016790088044,0,0,1.48259375283136,0.143124886741991,1.116475108079,1.2655176988749,1.5250415513906,0.255897791311334,2.1396949401696,1.27281299170375,1.56989728039846,1.07923474549989,1.09814811894422,0.706874414074119,0.202182481573316,1.58510321173008,0.842516912477962,0.48763373908959,1.46228093778771,0,1.09199929126389,1.1312434556297,0,0,0,0,1.15755106853338,1.9676842561399,0.202910376962704,0.30982349809975,1.12678241012897,0,0.88424136911809,0,0,2.32218398827431,1.97576935775941,1.13841952129715,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0.47748896947538,0,0,0,0,0,0,0.211125408127993,1.19548792950642,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.687944129886466,0,0,0,0,0,1.12990370390266,0,0,0,0.195551382734803,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0,0.203996435272644,0.288950589901519,0,0,0,0,0,0.279282401272254,0,1.43574604915363,0,0,0,0.201550417460179,2.88239906833923,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0,0,0,0,0,0,0.104909176269996,0,0.179287339332845,0,0,0,0,0,1.72844298240254,0,0,0,0.170388021785422,0.339936274560377,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0.249960815924213,0,0,0.941063278792687,0,0,2.9850960577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| ||
|short_description=p@chr21:47404201..47404227,- | |||
}} | }} |
Latest revision as of 18:41, 28 July 2015
Short description: | p@chr21:47404201..47404227, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47404201..47404227, - |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 2.02e-14 | 55 |
muscle precursor cell | 2.83e-13 | 58 |
myoblast | 2.83e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.83e-13 | 58 |
fibroblast | 1.14e-12 | 76 |
multi fate stem cell | 1.34e-12 | 427 |
electrically responsive cell | 3.01e-12 | 61 |
electrically active cell | 3.01e-12 | 61 |
somatic stem cell | 4.37e-12 | 433 |
stem cell | 1.99e-11 | 441 |
mesenchymal stem cell of adipose | 4.11e-10 | 8 |
smooth muscle cell | 5.16e-10 | 43 |
smooth muscle myoblast | 5.16e-10 | 43 |
hair follicle cell | 4.20e-09 | 5 |
cell of skeletal muscle | 1.70e-08 | 9 |
extracellular matrix secreting cell | 3.08e-08 | 15 |
stromal cell | 4.49e-08 | 28 |
connective tissue cell | 1.57e-07 | 361 |
skin fibroblast | 3.62e-07 | 23 |
fibrocyte | 7.32e-07 | 3 |
tendon cell | 7.32e-07 | 3 |