FFCP PHASE1:Hg19::chr22:21138297..21138307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:21138297..21138307,+ | |||
|coexpression_cluster_id=C2639 | |coexpression_cluster_id=C2639 | ||
|description=CAGE_peak_at_chr22:21138297..21138307,+ | |description=CAGE_peak_at_chr22:21138297..21138307,+ | ||
|id=chr22:21138297..21138307,+ | |id=chr22:21138297..21138307,+ | ||
|ontology_enrichment_celltype=CL:0000359!9.36e-28!32;CL:0000192!2.58e-22!42;CL:0000514!2.58e-22!42;CL:0000680!7.88e-17!57;CL:0000056!7.88e-17!57;CL:0000355!7.88e-17!57;CL:0000187!3.37e-16!54;CL:0000183!4.07e-16!59;CL:0000222!3.17e-15!119;CL:0000393!4.52e-14!60;CL:0000211!4.52e-14!60;CL:0002592!2.36e-10!3;CL:0000220!4.56e-10!246;CL:0002321!6.58e-10!248;CL:0000071!2.89e-09!18;CL:0002546!2.89e-09!18;CL:1000413!2.53e-08!9;CL:0002139!2.66e-08!24;CL:0002539!4.66e-08!10;CL:0002594!1.14e-07!4;CL:0000055!2.96e-07!180;CL:0002596!3.19e-07!2;CL:0002589!3.72e-07!2 | |ontology_enrichment_celltype=CL:0000359!9.36e-28!32;CL:0000192!2.58e-22!42;CL:0000514!2.58e-22!42;CL:0000680!7.88e-17!57;CL:0000056!7.88e-17!57;CL:0000355!7.88e-17!57;CL:0000187!3.37e-16!54;CL:0000183!4.07e-16!59;CL:0000222!3.17e-15!119;CL:0000393!4.52e-14!60;CL:0000211!4.52e-14!60;CL:0002592!2.36e-10!3;CL:0000220!4.56e-10!246;CL:0002321!6.58e-10!248;CL:0000071!2.89e-09!18;CL:0002546!2.89e-09!18;CL:1000413!2.53e-08!9;CL:0002139!2.66e-08!24;CL:0002539!4.66e-08!10;CL:0002594!1.14e-07!4;CL:0000055!2.96e-07!180;CL:0002596!3.19e-07!2;CL:0002589!3.72e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.01e-38;32!CL:0000192;1.82e-21;43!CL:0002539;2.00e-18;10!CL:0002592;7.53e-16;3!CL:0000187;6.93e-13;55!CL:0002594;6.37e-12;4!CL:0000393;4.10e-08;61!CL:0000211;4.10e-08;61!CL:0002554;8.76e-07;2!CL:0002589;8.76e-07;2!CL:0002596;8.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.07e-40,32;CL:0000192,9.99e-30,43;CL:0000514,9.99e-30,43;CL:0000187,6.20e-23,55;CL:0000680,1.13e-21,58;CL:0000056,1.13e-21,58;CL:0000355,1.13e-21,58;CL:0000393,1.55e-20,61;CL:0000211,1.55e-20,61;CL:0002539,2.10e-18,10;CL:0002592,5.38e-16,3;CL:0000222,1.18e-13,121;CL:0002594,1.05e-11,4;CL:0002321,8.65e-08,250;CL:0002596,7.61e-07,2;CL:0002554,8.06e-07,2;CL:0002589,9.02e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.82e-21;43!CL:0000355;5.35e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr22:21138297..21138307,+ | |short_description=p@chr22:21138297..21138307,+ | ||
}} | }} |
Latest revision as of 19:16, 28 July 2015
Short description: | p@chr22:21138297..21138307, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:21138297..21138307, + |
Coexpression cluster: | C2639_Smooth_large_Endothelial_Aortic_osteosarcoma_Preadipocyte_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.07e-40 | 32 |
smooth muscle cell | 9.99e-30 | 43 |
smooth muscle myoblast | 9.99e-30 | 43 |
muscle cell | 6.20e-23 | 55 |
muscle precursor cell | 1.13e-21 | 58 |
myoblast | 1.13e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.13e-21 | 58 |
electrically responsive cell | 1.55e-20 | 61 |
electrically active cell | 1.55e-20 | 61 |
aortic smooth muscle cell | 2.10e-18 | 10 |
smooth muscle cell of the coronary artery | 5.38e-16 | 3 |
mesodermal cell | 1.18e-13 | 121 |
smooth muscle cell of the umbilical artery | 1.05e-11 | 4 |
embryonic cell | 8.65e-08 | 250 |
smooth muscle cell of the carotid artery | 7.61e-07 | 2 |
fibroblast of lymphatic vessel | 8.06e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 9.02e-07 | 2 |