FFCP PHASE1:Hg19::chr2:5835715..5835720,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:5835715..5835720,+ | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_at_chr2:5835715..5835720,+ | |||
|id=chr2:5835715..5835720,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.30e-19!25;CL:0000133!1.13e-18!59;CL:0000221!2.95e-14!71;CL:0000333!1.14e-13!41;CL:0000055!3.98e-13!180;CL:0000095!8.13e-12!17;CL:0000123!8.13e-12!17;CL:0000243!6.35e-10!15;CL:0000125!6.35e-10!15;CL:0000030!6.35e-10!15;CL:0000339!6.35e-10!15;CL:0000047!9.32e-10!8;CL:0000128!8.46e-08!7;CL:0000126!8.46e-08!7;CL:0000127!8.46e-08!7;CL:0002453!8.46e-08!7;CL:0000540!1.15e-07!6;CL:0000031!1.15e-07!6;CL:0000404!1.15e-07!6;CL:0000147!6.06e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.83e-29;25!CL:0002321;2.57e-16;15!CL:0000095;1.62e-14;17!CL:0000540;1.51e-13;6!CL:0000404;1.51e-13;6!CL:0000333;2.98e-12;5!CL:0000128;1.49e-11;7!CL:0000126;1.49e-11;7!CL:0000127;1.49e-11;7!CL:0000243;3.14e-11;15!CL:0000125;3.14e-11;15!CL:0002322;3.77e-11;5!CL:0002605;7.53e-08;3!CL:0002603;1.90e-07;3!CL:0000064;2.73e-07;3!CL:0000067;2.73e-07;3!CL:0005012;2.73e-07;3!CL:0002304;2.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.41e-29,59;CL:0002319,8.49e-29,25;CL:0000221,2.45e-24,72;CL:0000047,5.01e-18,8;CL:0000333,1.24e-17,41;CL:0000095,2.35e-14,17;CL:0000123,2.35e-14,17;CL:0000540,7.87e-14,6;CL:0000031,7.87e-14,6;CL:0000404,7.87e-14,6;CL:0000128,2.16e-11,7;CL:0000126,2.16e-11,7;CL:0000127,2.16e-11,7;CL:0002453,2.16e-11,7;CL:0002322,3.20e-11,5;CL:0000243,4.75e-11,15;CL:0000125,4.75e-11,15;CL:0000030,4.75e-11,15;CL:0000339,4.75e-11,15;CL:0002605,9.17e-08,3;CL:0000064,1.96e-07,3;CL:0000067,1.96e-07,3;CL:0005012,1.96e-07,3;CL:0002304,1.96e-07,3;CL:0002603,2.43e-07,3;CL:0002586,5.99e-07,3;CL:0002321,6.11e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000133;4.23e-14;59!CL:0000031;1.51e-13;6!CL:0000339;3.14e-11;15!CL:0000221;3.30e-09;72 | |||
|ontology_enrichment_disease=DOID:171!7.00e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.53e-14;10!DOID:169;4.06e-10;6!DOID:3095;4.50e-07;22!DOID:2994;4.50e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.18e-14,10;DOID:169,4.97e-10,6;DOID:3095,5.20e-07,22;DOID:2994,5.20e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.62e-28!94;UBERON:0001016!2.62e-28!94;UBERON:0000924!3.41e-26!173;UBERON:0006601!3.41e-26!173;UBERON:0005743!8.44e-25!86;UBERON:0004121!1.16e-23!169;UBERON:0001017!4.55e-23!82;UBERON:0002346!4.82e-17!90;UBERON:0000955!2.91e-15!69;UBERON:0006238!2.91e-15!69;UBERON:0000033!6.50e-15!123;UBERON:0003075!1.42e-14!86;UBERON:0007284!1.42e-14!86;UBERON:0000153!1.67e-14!129;UBERON:0007811!1.67e-14!129;UBERON:0000475!8.00e-12!365;UBERON:0003056!6.97e-11!61;UBERON:0000064!1.30e-10!219;UBERON:0002616!2.13e-09!59;UBERON:0007625!2.66e-09!11;UBERON:0001049!3.22e-09!57;UBERON:0005068!3.22e-09!57;UBERON:0006241!3.22e-09!57;UBERON:0007135!3.22e-09!57;UBERON:0000481!5.61e-09!347;UBERON:0002104!1.45e-08!21;UBERON:0000922!1.58e-08!612;UBERON:0001456!1.87e-08!21;UBERON:0000019!2.12e-08!19;UBERON:0000047!2.12e-08!19;UBERON:0004088!2.12e-08!19;UBERON:0003072!2.12e-08!19;UBERON:0003071!2.12e-08!19;UBERON:0004128!2.12e-08!19;UBERON:0000468!3.70e-08!659;UBERON:0000119!6.10e-08!312;UBERON:0001032!7.77e-08!24;UBERON:0004456!7.77e-08!24;UBERON:0000970!9.28e-08!20;UBERON:0002200!1.17e-07!11;UBERON:0006876!1.17e-07!11;UBERON:0000483!1.62e-07!309;UBERON:0000020!4.35e-07!23;UBERON:0002020!5.87e-07!34;UBERON:0003528!5.87e-07!34;UBERON:0001893!7.44e-07!34;UBERON:0000013!8.02e-07!5;UBERON:0002410!8.02e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.99e-14;11!UBERON:0000013;2.98e-12;5!UBERON:0002410;2.98e-12;5!UBERON:0002104;3.32e-12;21!UBERON:0001456;4.72e-12;21!UBERON:0000019;1.81e-11;19!UBERON:0000047;1.81e-11;19!UBERON:0004088;1.81e-11;19!UBERON:0010230;1.81e-11;19!UBERON:0000970;9.06e-11;20!UBERON:0001032;2.53e-10;24!UBERON:0004456;2.53e-10;24!UBERON:0000010;4.20e-09;8!UBERON:0000020;4.83e-09;23!UBERON:0002050;1.81e-07;5!UBERON:0005423;1.81e-07;5!UBERON:0001778;2.73e-07;3!UBERON:0001775;2.73e-07;3!UBERON:0000922;3.51e-07;49!UBERON:0000966;5.01e-07;5!UBERON:0005388;5.01e-07;5!UBERON:0001802;5.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.30e-19,171;UBERON:0000924,1.30e-19,171;UBERON:0006601,1.30e-19,171;UBERON:0001016,3.69e-15,89;UBERON:0007625,1.27e-14,11;UBERON:0001456,1.24e-13,22;UBERON:0000019,4.49e-13,20;UBERON:0000047,4.49e-13,20;UBERON:0010312,4.49e-13,20;UBERON:0004088,4.49e-13,20;UBERON:0010230,4.49e-13,20;UBERON:0003072,4.49e-13,20;UBERON:0004128,4.49e-13,20;UBERON:0003071,4.49e-13,20;UBERON:0000970,2.59e-12,21;UBERON:0002104,2.59e-12,21;UBERON:0000013,3.81e-12,5;UBERON:0002410,3.81e-12,5;UBERON:0002346,3.67e-11,86;UBERON:0000020,2.04e-10,24;UBERON:0001032,2.04e-10,24;UBERON:0004456,2.04e-10,24;UBERON:0001017,3.57e-10,81;UBERON:0000010,4.38e-09,8;UBERON:0000966,4.49e-09,6;UBERON:0005388,4.49e-09,6;UBERON:0001802,4.49e-09,6;UBERON:0001781,6.52e-09,4;UBERON:0003075,7.89e-09,82;UBERON:0007284,7.89e-09,82;UBERON:0003056,4.49e-08,61;UBERON:0005085,1.91e-07,31;UBERON:0001778,1.96e-07,3;UBERON:0001775,1.96e-07,3;UBERON:0010371,2.78e-07,104;UBERON:0001444,2.98e-07,49;UBERON:0001782,5.99e-07,3;UBERON:0005424,5.99e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,1.31064823278103,0.263766978228454,0.990130823680373,0.662794751455832,1.34465029290355,0,0.730310090387373,0,2.46242116153576,2.24400760368678,3.44800193625897,8.5870796139317,5.88560027813402,2.13422487311165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,2.3858578411533,0,3.87592750372678,3.1042115644759,1.84453049955565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.98667019366864,0,0.134710672069688,0,0.908144565869588,0.576175924479999,0,0,0.570471821544449,0,0.587172493218824,1.45685649931318,0.842704840213491,0,2.7023549808589,0,0,0,0,0,1.5150250255866,0.625592599359821,0,0,0,0,0,0.538168907066586,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0.302256294682921,1.01736355386293,0,0.272746120590835,0,1.70763188581434,3.04818467139416,2.67246068599892,2.69518743039963,5.2987378683882,7.2995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0.857839051492628,0,0,0,1.85176890317059,0.325808305310325,0,5.77325368101093,3.94163376915261,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571481048629521,0,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0.448524337381443,0,1.466765716419,0.517086863031111,0,0,0,0,1.02882949704857,0,0.799266537048298,0,0.542621605391443,0,0,1.06617584622764,1.58390374586686,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0.579125226670317,1.2328579353023,0.179060963239896,0,0,0,0,3.81141936333695,7.8083912314573,46.3973287666617,56.6204976830099,27.431366321086,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0,0,0,0,0,0,0,1.99267679560631,0.737476674166813,0.173767228936166,0.391602314925481,2.74514739048685,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,1.80479845162965,2.15642943892361,0,2.92278449306521,2.42768746453614,0,0.510281115829547,0.215915916102139,0,0.270946437543853,0,0.509752546090077,0,0.671624264166535,0,0,1.53870075069834,2.95213181129735,1.62689197332152,0,0,0,0,0,0,4.93020663289822,0.616194468458578,0.460511024178389,1.24052915236078,0.322260734604821,0.435050081742686,0.767039646744908,10.1496520637281,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0.316379424718726,0,0.511795582622668,1.71175595213568,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,1.31178950409327,0.202910376962704,0,0.281695602532241,1.57752487424457,0.589494246078727,0,0,0,0,1.13841952129715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78704762688578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33150377598474,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0.562677665642051,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,9.98068990005971,0,0,0,0,0,0.236387681767936,6.20538071834636,0.583209226766509,0,0,0.844175070377856,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,44.9926959596821,0,0.300646838828985,0.72581733978073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0.126621591911757,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0,0.815425236441684,1.35983700206033,0.713987523454252,0.577901179803038,1.20084057741958,0.684526894459965,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.671834724867263,0,0,0,0,0,0,0,0,0.953423842781029,1.92903778158023,1.51293380256957,2.9080823662043,0,0,0.121499113316049,0,0,0.262272940674991,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.443716206147409,0.558867626472451,2.62862406378839,1.12482367165896,0,0,0,2.81000943484129,9.13002480248199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80019435264208,0,0,0,0,1.92997432237433,0.521988583930423,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.265740125993,7.00861274078432,4.87524419753279,10.8117541810094,5.43144095852881,5.73952284274544,2.47871528518004,2.23457967189298,0,0.70975570501128,3.20228299314188,1.41070377476274,0.918736432059601,0.192687675289379,0,0.319267718114302,0,23.4426677486198,0,0,2.85538840518309,0,0,0,0,0,0,0.596748666348824,0,0.20170506870352,0,0,0,0,0.202612753855184,0,0.206686796501184,0.19024743058172,35.006387777166,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0.785577949580009,0,1.82631744101899,0,0,0,4.89842196371452,0,1.21700790611806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,5.38708532052603,1.05673990496671,0,0.437119121007915,0,0,0,0.588925401344836,0.297046400327086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| |||
|short_description=p@chr2:5835715..5835720,+ | |||
}} |
Latest revision as of 11:06, 29 July 2015
Short description: | p@chr2:5835715..5835720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:5835715..5835720, + |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.41e-29 | 59 |
neural cell | 8.49e-29 | 25 |
ectodermal cell | 2.45e-24 | 72 |
neuronal stem cell | 5.01e-18 | 8 |
migratory neural crest cell | 1.24e-17 | 41 |
neuron associated cell | 2.35e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 2.35e-14 | 17 |
neuron | 7.87e-14 | 6 |
neuroblast | 7.87e-14 | 6 |
electrically signaling cell | 7.87e-14 | 6 |
oligodendrocyte | 2.16e-11 | 7 |
macroglial cell | 2.16e-11 | 7 |
astrocyte | 2.16e-11 | 7 |
oligodendrocyte precursor cell | 2.16e-11 | 7 |
embryonic stem cell | 3.20e-11 | 5 |
glial cell (sensu Vertebrata) | 4.75e-11 | 15 |
glial cell | 4.75e-11 | 15 |
glioblast | 4.75e-11 | 15 |
glioblast (sensu Vertebrata) | 4.75e-11 | 15 |
astrocyte of the cerebral cortex | 9.17e-08 | 3 |
ciliated cell | 1.96e-07 | 3 |
ciliated epithelial cell | 1.96e-07 | 3 |
multi-ciliated epithelial cell | 1.96e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.96e-07 | 3 |
astrocyte of the cerebellum | 2.43e-07 | 3 |
retinal pigment epithelial cell | 5.99e-07 | 3 |
embryonic cell | 6.11e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.18e-14 | 10 |
neuroendocrine tumor | 4.97e-10 | 6 |
germ cell and embryonal cancer | 5.20e-07 | 22 |
germ cell cancer | 5.20e-07 | 22 |