FFCP PHASE1:Hg19::chr3:146227893..146227896,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:146227893..146227896,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr3:146227893..146227896,- | |description=CAGE_peak_at_chr3:146227893..146227896,- | ||
|id=chr3:146227893..146227896,- | |id=chr3:146227893..146227896,- | ||
|ontology_enrichment_celltype=CL:0000860!2.50e-29!45;CL:0002057!1.26e-27!42;CL:0002194!7.32e-25!63;CL:0000576!7.32e-25!63;CL:0000040!7.32e-25!63;CL:0000559!7.32e-25!63;CL:0000839!1.32e-24!70;CL:0000557!4.78e-24!71;CL:0002009!1.17e-23!65;CL:0000766!1.75e-21!76;CL:0000763!2.37e-15!112;CL:0000049!2.37e-15!112;CL:0002031!1.91e-12!124;CL:0002087!3.27e-12!119;CL:0000738!5.55e-10!140;CL:0002032!2.35e-09!165;CL:0000837!2.35e-09!165;CL:0000037!7.10e-09!172;CL:0000566!7.10e-09!172;CL:0000988!5.46e-08!182 | |ontology_enrichment_celltype=CL:0000860!2.50e-29!45;CL:0002057!1.26e-27!42;CL:0002194!7.32e-25!63;CL:0000576!7.32e-25!63;CL:0000040!7.32e-25!63;CL:0000559!7.32e-25!63;CL:0000839!1.32e-24!70;CL:0000557!4.78e-24!71;CL:0002009!1.17e-23!65;CL:0000766!1.75e-21!76;CL:0000763!2.37e-15!112;CL:0000049!2.37e-15!112;CL:0002031!1.91e-12!124;CL:0002087!3.27e-12!119;CL:0000738!5.55e-10!140;CL:0002032!2.35e-09!165;CL:0000837!2.35e-09!165;CL:0000037!7.10e-09!172;CL:0000566!7.10e-09!172;CL:0000988!5.46e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.07e-93;33!CL:0002057;6.07e-93;33!CL:0000473;1.77e-63;39!CL:0000234;1.77e-63;39!CL:0000576;1.61e-42;48!CL:0000766;2.24e-24;69!CL:0000763;8.39e-15;100!CL:0002087;2.00e-14;104!CL:0000738;1.62e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.30e-80,42;CL:0002057,1.30e-80,42;CL:0000473,3.97e-70,48;CL:0000234,3.97e-70,48;CL:0002194,1.93e-55,59;CL:0000576,1.93e-55,59;CL:0000040,1.93e-55,59;CL:0000559,1.93e-55,59;CL:0002009,1.52e-53,61;CL:0000839,2.68e-49,66;CL:0000557,1.59e-48,67;CL:0000766,5.71e-45,72;CL:0000763,5.53e-29,108;CL:0000049,5.53e-29,108;CL:0002087,5.03e-27,115;CL:0002031,9.19e-26,120;CL:0000738,2.42e-22,136;CL:0002032,2.40e-18,161;CL:0000837,2.40e-18,161;CL:0000037,1.95e-17,168;CL:0000988,2.25e-16,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-57;42!CL:0000049;7.05e-10;108!UBERON:0005425;3.12e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.12e-19!80;UBERON:0002390!7.47e-19!102;UBERON:0003061!7.47e-19!102;UBERON:0001474!2.67e-17!86;UBERON:0002193!1.05e-16!112;UBERON:0004765!2.30e-14!101;UBERON:0001434!2.30e-14!101;UBERON:0002405!6.48e-11!115;UBERON:0002204!1.34e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;3.12e-09;1!UBERON:0000941;3.12e-09;1!UBERON:0001785;3.12e-09;1!UBERON:0002464;3.12e-09;1!UBERON:0004904;3.12e-09;1!UBERON:0001021;3.12e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.86e-42,76;UBERON:0001474,3.84e-39,82;UBERON:0002390,1.03e-35,98;UBERON:0003061,1.03e-35,98;UBERON:0004765,2.12e-35,90;UBERON:0002405,3.68e-34,93;UBERON:0002193,4.08e-32,108;UBERON:0001434,1.49e-31,100;UBERON:0002204,1.46e-17,167;UBERON:0003081,1.81e-15,203;UBERON:0000926,1.03e-09,315;UBERON:0004120,1.03e-09,315;UBERON:0006603,1.03e-09,315;UBERON:0000941,3.25e-09,1;UBERON:0001785,3.25e-09,1;UBERON:0002464,3.25e-09,1;UBERON:0004904,3.25e-09,1;UBERON:0001021,3.25e-09,1;UBERON:0003902,3.25e-09,1;UBERON:0005425,3.25e-09,1;UBERON:0000996,4.15e-09,1 | |||
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| ||
|short_description=p@chr3:146227893..146227896,- | |short_description=p@chr3:146227893..146227896,- | ||
}} | }} |
Latest revision as of 16:39, 29 July 2015
Short description: | p@chr3:146227893..146227896, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:146227893..146227896, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.30e-80 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-80 | 42 |
defensive cell | 3.97e-70 | 48 |
phagocyte | 3.97e-70 | 48 |
monopoietic cell | 1.93e-55 | 59 |
monocyte | 1.93e-55 | 59 |
monoblast | 1.93e-55 | 59 |
promonocyte | 1.93e-55 | 59 |
macrophage dendritic cell progenitor | 1.52e-53 | 61 |
myeloid lineage restricted progenitor cell | 2.68e-49 | 66 |
granulocyte monocyte progenitor cell | 1.59e-48 | 67 |
myeloid leukocyte | 5.71e-45 | 72 |
myeloid cell | 5.53e-29 | 108 |
common myeloid progenitor | 5.53e-29 | 108 |
nongranular leukocyte | 5.03e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 9.19e-26 | 120 |
leukocyte | 2.42e-22 | 136 |
hematopoietic oligopotent progenitor cell | 2.40e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.40e-18 | 161 |
hematopoietic stem cell | 1.95e-17 | 168 |
hematopoietic cell | 2.25e-16 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.86e-42 | 76 |
bone element | 3.84e-39 | 82 |
hematopoietic system | 1.03e-35 | 98 |
blood island | 1.03e-35 | 98 |
skeletal element | 2.12e-35 | 90 |
immune system | 3.68e-34 | 93 |
hemolymphoid system | 4.08e-32 | 108 |
skeletal system | 1.49e-31 | 100 |
musculoskeletal system | 1.46e-17 | 167 |
lateral plate mesoderm | 1.81e-15 | 203 |
mesoderm | 1.03e-09 | 315 |
mesoderm-derived structure | 1.03e-09 | 315 |
presumptive mesoderm | 1.03e-09 | 315 |
cranial nerve II | 3.25e-09 | 1 |
cranial nerve | 3.25e-09 | 1 |
nerve trunk | 3.25e-09 | 1 |
nerve connecting eye with brain | 3.25e-09 | 1 |
nerve | 3.25e-09 | 1 |
retinal neural layer | 3.25e-09 | 1 |
presumptive neural retina | 3.25e-09 | 1 |
vagina | 4.15e-09 | 1 |