FFCP PHASE1:Hg19::chr3:156535207..156535218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:156535207..156535218,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr3:156535207..156535218,+ | |description=CAGE_peak_at_chr3:156535207..156535218,+ | ||
|id=chr3:156535207..156535218,+ | |id=chr3:156535207..156535218,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.72e-25!42;CL:0000860!3.27e-24!45;CL:0002009!5.13e-15!65;CL:0000557!7.92e-15!71;CL:0000766!4.06e-14!76;CL:0002194!2.01e-13!63;CL:0000576!2.01e-13!63;CL:0000040!2.01e-13!63;CL:0000559!2.01e-13!63;CL:0000839!6.20e-13!70;CL:0002371!1.01e-09!591;CL:0000723!6.42e-09!436;CL:0002320!8.10e-09!365;CL:0000134!1.08e-08!358;CL:0000034!1.21e-08!444;CL:0000048!1.76e-08!430;CL:0000763!3.44e-08!112;CL:0000049!3.44e-08!112;CL:0000144!3.47e-08!625;CL:0000012!4.02e-08!682;CL:0000548!7.26e-08!679;CL:0000004!7.26e-08!679;CL:0000255!7.26e-08!679;CL:0000063!1.19e-07!578;CL:0000738!3.80e-07!140 | |ontology_enrichment_celltype=CL:0002057!1.72e-25!42;CL:0000860!3.27e-24!45;CL:0002009!5.13e-15!65;CL:0000557!7.92e-15!71;CL:0000766!4.06e-14!76;CL:0002194!2.01e-13!63;CL:0000576!2.01e-13!63;CL:0000040!2.01e-13!63;CL:0000559!2.01e-13!63;CL:0000839!6.20e-13!70;CL:0002371!1.01e-09!591;CL:0000723!6.42e-09!436;CL:0002320!8.10e-09!365;CL:0000134!1.08e-08!358;CL:0000034!1.21e-08!444;CL:0000048!1.76e-08!430;CL:0000763!3.44e-08!112;CL:0000049!3.44e-08!112;CL:0000144!3.47e-08!625;CL:0000012!4.02e-08!682;CL:0000548!7.26e-08!679;CL:0000004!7.26e-08!679;CL:0000255!7.26e-08!679;CL:0000063!1.19e-07!578;CL:0000738!3.80e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.74e-41;33!CL:0002057;8.74e-41;33!CL:0000473;2.21e-30;39!CL:0000234;2.21e-30;39!CL:0000576;4.03e-20;48!CL:0000766;9.70e-16;69!CL:0000767;2.35e-10;3!CL:0000569;5.00e-08;4!CL:0001014;1.58e-07;2!CL:0001016;1.58e-07;2!CL:0000763;3.86e-07;100!CL:0002195;5.22e-07;2!CL:0002571;5.22e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.75e-41,42;CL:0002057,7.75e-41,42;CL:0000473,7.27e-35,48;CL:0000234,7.27e-35,48;CL:0002009,2.32e-30,61;CL:0000557,2.34e-29,67;CL:0000766,4.32e-29,72;CL:0002194,1.61e-26,59;CL:0000576,1.61e-26,59;CL:0000040,1.61e-26,59;CL:0000559,1.61e-26,59;CL:0000839,3.38e-25,66;CL:0000763,5.43e-20,108;CL:0000049,5.43e-20,108;CL:0000134,2.85e-14,354;CL:0000738,2.89e-14,136;CL:0002320,9.48e-14,361;CL:0002031,2.88e-13,120;CL:0000219,6.49e-12,386;CL:0000048,8.94e-12,427;CL:0000034,1.10e-11,441;CL:0000723,1.98e-11,433;CL:0002032,7.15e-11,161;CL:0000837,7.15e-11,161;CL:0002087,1.37e-10,115;CL:0000767,1.58e-10,3;CL:0000037,4.13e-10,168;CL:0000988,3.18e-09,177;CL:0000569,4.78e-08,4;CL:0000011,4.78e-08,4;CL:0001014,1.33e-07,2;CL:0001016,1.33e-07,2;CL:0002195,4.28e-07,2;CL:0002571,4.28e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.95e-30;42!CL:0000011;5.00e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!1.69e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.85e-13!80;UBERON:0004765!2.11e-12!101;UBERON:0001434!2.11e-12!101;UBERON:0001474!5.18e-12!86;UBERON:0002204!4.59e-10!167;UBERON:0002390!3.75e-09!102;UBERON:0003061!3.75e-09!102;UBERON:0002405!4.75e-09!115;UBERON:0003081!4.50e-08!216;UBERON:0002384!6.84e-08!375;UBERON:0002193!2.54e-07!112;UBERON:0000926!2.87e-07!448;UBERON:0004120!2.87e-07!448;UBERON:0006603!2.87e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!7.85e-13!80;UBERON:0004765!2.11e-12!101;UBERON:0001434!2.11e-12!101;UBERON:0001474!5.18e-12!86;UBERON:0002204!4.59e-10!167;UBERON:0002390!3.75e-09!102;UBERON:0003061!3.75e-09!102;UBERON:0002405!4.75e-09!115;UBERON:0003081!4.50e-08!216;UBERON:0002384!6.84e-08!375;UBERON:0002193!2.54e-07!112;UBERON:0000926!2.87e-07!448;UBERON:0004120!2.87e-07!448;UBERON:0006603!2.87e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.82e-27,76;UBERON:0001474,9.10e-27,82;UBERON:0004765,1.05e-23,90;UBERON:0002405,6.22e-21,93;UBERON:0001434,1.45e-20,100;UBERON:0002390,1.74e-19,98;UBERON:0003061,1.74e-19,98;UBERON:0002193,5.32e-17,108;UBERON:0003081,9.54e-14,203;UBERON:0002384,4.88e-13,371;UBERON:0002204,5.24e-12,167;UBERON:0000926,1.36e-08,315;UBERON:0004120,1.36e-08,315;UBERON:0006603,1.36e-08,315 | |||
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| ||
|short_description=p@chr3:156535207..156535218,+ | |short_description=p@chr3:156535207..156535218,+ | ||
}} | }} |
Latest revision as of 17:29, 29 July 2015
Short description: | p@chr3:156535207..156535218, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:156535207..156535218, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.82e-27 | 76 |
bone element | 9.10e-27 | 82 |
skeletal element | 1.05e-23 | 90 |
immune system | 6.22e-21 | 93 |
skeletal system | 1.45e-20 | 100 |
hematopoietic system | 1.74e-19 | 98 |
blood island | 1.74e-19 | 98 |
hemolymphoid system | 5.32e-17 | 108 |
lateral plate mesoderm | 9.54e-14 | 203 |
connective tissue | 4.88e-13 | 371 |
musculoskeletal system | 5.24e-12 | 167 |
mesoderm | 1.36e-08 | 315 |
mesoderm-derived structure | 1.36e-08 | 315 |
presumptive mesoderm | 1.36e-08 | 315 |