FFCP PHASE1:Hg19::chr3:163246025..163246029,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:163246025..163246029,+ | |||
|coexpression_cluster_id=C217 | |||
|description=CAGE_peak_at_chr3:163246025..163246029,+ | |description=CAGE_peak_at_chr3:163246025..163246029,+ | ||
|id=chr3:163246025..163246029,+ | |id=chr3:163246025..163246029,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.22e-29!3;CL:0000861!1.22e-29!3;CL:0000946!1.21e-10!1;CL:0000786!1.21e-10!1;CL:0000980!1.21e-10!1;CL:0000235!2.64e-09!10 | |ontology_enrichment_celltype=CL:0002150!1.22e-29!3;CL:0000861!1.22e-29!3;CL:0000946!1.21e-10!1;CL:0000786!1.21e-10!1;CL:0000980!1.21e-10!1;CL:0000235!2.64e-09!10 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.55e-98;1!UBERON:0003056;5.96e-34;3 | |||
|ontology_enrichment_disease=DOID:1036!2.08e-11!8;DOID:3371!1.77e-10!1;DOID:4549!1.77e-10!1;DOID:5861!1.77e-10!1;DOID:6496!1.77e-10!1;DOID:1240!2.17e-08!39;DOID:162!9.11e-08!235;DOID:8692!1.25e-07!31;DOID:14566!1.50e-07!239;DOID:3119!9.05e-07!14 | |ontology_enrichment_disease=DOID:1036!2.08e-11!8;DOID:3371!1.77e-10!1;DOID:4549!1.77e-10!1;DOID:5861!1.77e-10!1;DOID:6496!1.77e-10!1;DOID:1240!2.17e-08!39;DOID:162!9.11e-08!235;DOID:8692!1.25e-07!31;DOID:14566!1.50e-07!239;DOID:3119!9.05e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000941!2.79e-11!1;UBERON:0004904!2.79e-11!1;UBERON:0002464!2.79e-11!1;UBERON:0001021!2.79e-11!1;UBERON:0001785!2.79e-11!1;UBERON:0000997!1.61e-10!1;UBERON:0005056!1.61e-10!1 | |ontology_enrichment_uberon=UBERON:0000941!2.79e-11!1;UBERON:0004904!2.79e-11!1;UBERON:0002464!2.79e-11!1;UBERON:0001021!2.79e-11!1;UBERON:0001785!2.79e-11!1;UBERON:0000997!1.61e-10!1;UBERON:0005056!1.61e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.55e-98;1!UBERON:0001785;2.55e-98;1!UBERON:0002464;2.55e-98;1!UBERON:0004904;2.55e-98;1!UBERON:0001021;2.55e-98;1!UBERON:0003714;4.52e-50;2!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0000010;2.45e-12;8!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-98,1;UBERON:0001785,2.55e-98,1;UBERON:0002464,2.55e-98,1;UBERON:0004904,2.55e-98,1;UBERON:0001021,2.55e-98,1;UBERON:0003902,2.55e-98,1;UBERON:0005425,2.55e-98,1;UBERON:0003714,4.52e-50,2;UBERON:0005162,4.52e-50,2;UBERON:0000122,4.52e-50,2;UBERON:0001781,7.14e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0000010,2.45e-12,8;UBERON:0004732,5.70e-09,13 | |||
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|short_description=p@chr3:163246025..163246029,+ | |short_description=p@chr3:163246025..163246029,+ | ||
}} | }} |
Latest revision as of 17:52, 29 July 2015
Short description: | p@chr3:163246025..163246029, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:163246025..163246029, + |
Coexpression cluster: | C217_carcinoid_neuroectodermal_mature_mesodermal_colon_acute_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
peripheral nervous system | 2.45e-12 | 8 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |