FFCP PHASE1:Hg19::chr3:47032286..47032317,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:47032286..47032317,+ | |||
|coexpression_cluster_id=C817 | |||
|description=CAGE_peak_at_chr3:47032286..47032317,+ | |||
|id=chr3:47032286..47032317,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.36e-58!140;CL:0002057!1.04e-55!42;CL:0000766!2.68e-53!76;CL:0000557!3.54e-52!71;CL:0000860!2.51e-51!45;CL:0000839!1.81e-50!70;CL:0002009!8.64e-49!65;CL:0002194!5.32e-48!63;CL:0000576!5.32e-48!63;CL:0000040!5.32e-48!63;CL:0000559!5.32e-48!63;CL:0002031!5.65e-48!124;CL:0002087!8.94e-48!119;CL:0000988!7.86e-47!182;CL:0000037!1.23e-44!172;CL:0000566!1.23e-44!172;CL:0002032!3.30e-42!165;CL:0000837!3.30e-42!165;CL:0000763!9.32e-40!112;CL:0000049!9.32e-40!112;CL:0000080!1.05e-14!6;CL:0000134!1.15e-13!358;CL:0002320!4.28e-13!365;CL:0000219!4.24e-11!390;CL:0000048!2.79e-09!430;CL:0000990!4.00e-09!8;CL:0000723!6.15e-09!436;CL:0002393!8.95e-09!9;CL:0002397!8.95e-09!9;CL:0000034!1.70e-08!444;CL:0000453!2.56e-08!5;CL:0000451!2.51e-07!10;CL:0000842!3.52e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.53e-21;33!CL:0002057;5.53e-21;33!CL:0000473;1.23e-15;39!CL:0000234;1.23e-15;39!CL:0000097;1.29e-15;5!CL:0000766;1.35e-10;69!CL:0000763;6.26e-09;100!CL:0000163;6.50e-09;9!CL:0000576;1.21e-08;48!CL:0002087;1.82e-08;104!CL:0000738;4.68e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.73e-23,177;CL:0000738,2.82e-23,136;CL:0000766,1.15e-22,72;CL:0000839,1.60e-21,66;CL:0002031,1.80e-21,120;CL:0000557,3.60e-21,67;CL:0002032,3.68e-19,161;CL:0000837,3.68e-19,161;CL:0000473,9.42e-19,48;CL:0000234,9.42e-19,48;CL:0000037,3.17e-18,168;CL:0000860,6.59e-18,42;CL:0002057,6.59e-18,42;CL:0000763,1.68e-16,108;CL:0000049,1.68e-16,108;CL:0000097,1.05e-15,5;CL:0002028,1.05e-15,5;CL:0002087,2.06e-15,115;CL:0002194,1.19e-14,59;CL:0000576,1.19e-14,59;CL:0000040,1.19e-14,59;CL:0000559,1.19e-14,59;CL:0002009,4.03e-14,61;CL:0000163,5.83e-09,9;CL:0000134,8.30e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;7.83e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;9.70e-10;1!DOID:0050177;9.70e-10;1!DOID:0050427;9.70e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.15e-09,1;DOID:0050177,1.15e-09,1;DOID:0050427,1.15e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.56e-58!102;UBERON:0003061!2.56e-58!102;UBERON:0002193!2.72e-56!112;UBERON:0002371!5.50e-45!80;UBERON:0002405!1.79e-41!115;UBERON:0001474!5.05e-41!86;UBERON:0004765!6.80e-35!101;UBERON:0001434!6.80e-35!101;UBERON:0003081!5.93e-21!216;UBERON:0002204!1.97e-16!167;UBERON:0002384!2.55e-12!375;UBERON:0004177!3.68e-11!7;UBERON:0002106!1.16e-07!3;UBERON:0004854!1.16e-07!3;UBERON:0009034!1.16e-07!3;UBERON:0002095!1.16e-07!3;UBERON:0004782!1.16e-07!3;UBERON:0003281!1.16e-07!3;UBERON:0009664!1.16e-07!3;UBERON:0002296!1.16e-07!3;UBERON:0005602!1.16e-07!3;UBERON:0001179!1.16e-07!3;UBERON:0006293!1.16e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.11e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.17e-21,98;UBERON:0003061,3.17e-21,98;UBERON:0002193,5.21e-19,108;UBERON:0002371,2.05e-18,76;UBERON:0001474,6.55e-17,82;UBERON:0004765,3.28e-15,90;UBERON:0002405,1.20e-14,93;UBERON:0001434,1.83e-13,100;UBERON:0003081,9.19e-09,203;UBERON:0002331,2.06e-08,10;UBERON:0000358,2.06e-08,10;UBERON:0000307,2.06e-08,10;UBERON:0000091,2.06e-08,10;UBERON:0000087,2.06e-08,10;UBERON:0007010,2.06e-08,10;UBERON:0007806,2.06e-08,10;UBERON:0008780,2.06e-08,10;UBERON:0005728,2.06e-08,10;UBERON:0002204,3.99e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20936304141395,4.10502947249729,2.75487734597877,0,0,0.154816123316076,0,0,0,0,0.568676929949686,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0.755751887377619,0.242584061187816,0,0.822335776043652,0.619412741790207,0.28769239232215,0.512321413058201,0.47296445977717,0.689491361473237,0.645484683583826,1.35426486594342,0.941211697713023,0.545812300115692,1.12361742222542,1.53041946185451,3.85114832491312,1.27867425159808,0.329851300186716,0,0,0.870627715885752,1.70215567407342,3.11411124497787,0,0.521482918420201,0.434377689410233,1.81619850790011,1.47311054395026,1.58231193720442,0,0.212604299965044,0.419317291016752,0.22465726229299,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,3.52457796419313,1.58531948758658,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0,0,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41302821701555,6.42532482521815,4.9078316267564,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30929650270355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677386656526276,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,2.5244319659539,0.654261577023377,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0.999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0.193766729508018,0.372448285775147,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,2.24397944612263 | |||
|short_description=p@chr3:47032286..47032317,+ | |||
}} |
Latest revision as of 21:30, 29 July 2015
Short description: | p@chr3:47032286..47032317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:47032286..47032317, + |
Coexpression cluster: | C817_cord_CD14_mycosis_xeroderma_migratory_B_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.73e-23 | 177 |
leukocyte | 2.82e-23 | 136 |
myeloid leukocyte | 1.15e-22 | 72 |
myeloid lineage restricted progenitor cell | 1.60e-21 | 66 |
hematopoietic lineage restricted progenitor cell | 1.80e-21 | 120 |
granulocyte monocyte progenitor cell | 3.60e-21 | 67 |
hematopoietic oligopotent progenitor cell | 3.68e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.68e-19 | 161 |
defensive cell | 9.42e-19 | 48 |
phagocyte | 9.42e-19 | 48 |
hematopoietic stem cell | 3.17e-18 | 168 |
classical monocyte | 6.59e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.59e-18 | 42 |
myeloid cell | 1.68e-16 | 108 |
common myeloid progenitor | 1.68e-16 | 108 |
mast cell | 1.05e-15 | 5 |
basophil mast progenitor cell | 1.05e-15 | 5 |
nongranular leukocyte | 2.06e-15 | 115 |
monopoietic cell | 1.19e-14 | 59 |
monocyte | 1.19e-14 | 59 |
monoblast | 1.19e-14 | 59 |
promonocyte | 1.19e-14 | 59 |
macrophage dendritic cell progenitor | 4.03e-14 | 61 |
endocrine cell | 5.83e-09 | 9 |
mesenchymal cell | 8.30e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.17e-21 | 98 |
blood island | 3.17e-21 | 98 |
hemolymphoid system | 5.21e-19 | 108 |
bone marrow | 2.05e-18 | 76 |
bone element | 6.55e-17 | 82 |
skeletal element | 3.28e-15 | 90 |
immune system | 1.20e-14 | 93 |
skeletal system | 1.83e-13 | 100 |
lateral plate mesoderm | 9.19e-09 | 203 |
umbilical cord | 2.06e-08 | 10 |
blastocyst | 2.06e-08 | 10 |
blastula | 2.06e-08 | 10 |
bilaminar disc | 2.06e-08 | 10 |
inner cell mass | 2.06e-08 | 10 |
cleaving embryo | 2.06e-08 | 10 |
connecting stalk | 2.06e-08 | 10 |
inner cell mass derived epiblast | 2.06e-08 | 10 |
extraembryonic mesoderm | 2.06e-08 | 10 |
musculoskeletal system | 3.99e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.15e-09 | 1 |
monogenic disease | 1.15e-09 | 1 |
xeroderma pigmentosum | 1.15e-09 | 1 |