FFCP PHASE1:Hg19::chr4:106394656..106394684,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:106394656..106394684,+ | |||
|coexpression_cluster_id=C686 | |||
|description=CAGE_peak_at_chr4:106394656..106394684,+ | |description=CAGE_peak_at_chr4:106394656..106394684,+ | ||
|id=chr4:106394656..106394684,+ | |id=chr4:106394656..106394684,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.51e-31!140;CL:0000037!8.71e-30!172;CL:0000566!8.71e-30!172;CL:0000988!2.42e-29!182;CL:0002057!4.57e-29!42;CL:0000860!4.75e-27!45;CL:0000766!8.49e-27!76;CL:0002032!1.64e-26!165;CL:0000837!1.64e-26!165;CL:0000763!4.76e-24!112;CL:0000049!4.76e-24!112;CL:0000557!7.19e-24!71;CL:0002087!2.39e-23!119;CL:0002009!3.18e-23!65;CL:0002031!1.04e-22!124;CL:0002194!6.93e-22!63;CL:0000576!6.93e-22!63;CL:0000040!6.93e-22!63;CL:0000559!6.93e-22!63;CL:0000839!1.48e-20!70;CL:0000219!6.89e-17!390;CL:0000134!2.19e-16!358;CL:0002320!1.22e-15!365;CL:0000034!2.50e-14!444;CL:0000048!2.80e-14!430;CL:0000723!5.28e-14!436;CL:0000003!1.74e-13!722;CL:0000144!1.65e-09!625;CL:0002371!4.48e-09!591;CL:0000012!7.89e-09!682;CL:0000548!4.78e-08!679;CL:0000004!4.78e-08!679;CL:0000255!4.78e-08!679;CL:0000063!6.40e-08!578;CL:0002393!3.24e-07!9;CL:0002397!3.24e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.51e-31!140;CL:0000037!8.71e-30!172;CL:0000566!8.71e-30!172;CL:0000988!2.42e-29!182;CL:0002057!4.57e-29!42;CL:0000860!4.75e-27!45;CL:0000766!8.49e-27!76;CL:0002032!1.64e-26!165;CL:0000837!1.64e-26!165;CL:0000763!4.76e-24!112;CL:0000049!4.76e-24!112;CL:0000557!7.19e-24!71;CL:0002087!2.39e-23!119;CL:0002009!3.18e-23!65;CL:0002031!1.04e-22!124;CL:0002194!6.93e-22!63;CL:0000576!6.93e-22!63;CL:0000040!6.93e-22!63;CL:0000559!6.93e-22!63;CL:0000839!1.48e-20!70;CL:0000219!6.89e-17!390;CL:0000134!2.19e-16!358;CL:0002320!1.22e-15!365;CL:0000034!2.50e-14!444;CL:0000048!2.80e-14!430;CL:0000723!5.28e-14!436;CL:0000003!1.74e-13!722;CL:0000144!1.65e-09!625;CL:0002371!4.48e-09!591;CL:0000012!7.89e-09!682;CL:0000548!4.78e-08!679;CL:0000004!4.78e-08!679;CL:0000255!4.78e-08!679;CL:0000063!6.40e-08!578;CL:0002393!3.24e-07!9;CL:0002397!3.24e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.70e-52;33!CL:0002057;5.70e-52;33!CL:0000473;8.36e-40;39!CL:0000234;8.36e-40;39!CL:0000576;4.07e-38;48!CL:0000766;3.02e-32;69!CL:0002087;1.94e-17;104!CL:0000763;8.85e-15;100!CL:0000738;2.26e-14;136!CL:0000624;6.92e-12;6!CL:0002393;7.92e-12;6!CL:0002397;7.92e-12;6!CL:0000094;1.77e-11;8!CL:0000988;7.27e-09;177!CL:0000081;5.19e-08;11!CL:0000219;5.71e-08;193!CL:0000791;2.32e-07;18!CL:0000789;2.32e-07;18!CL:0002419;2.32e-07;18!CL:0000784;8.36e-07;3!CL:0000623;8.36e-07;3!CL:0000775;9.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.33e-73,42;CL:0002057,1.33e-73,42;CL:0000473,1.05e-68,48;CL:0000234,1.05e-68,48;CL:0000766,3.72e-68,72;CL:0000738,9.11e-68,136;CL:0000557,1.93e-62,67;CL:0002009,1.65e-58,61;CL:0000037,7.76e-56,168;CL:0000839,3.16e-55,66;CL:0002194,8.03e-55,59;CL:0000576,8.03e-55,59;CL:0000040,8.03e-55,59;CL:0000559,8.03e-55,59;CL:0002031,8.62e-55,120;CL:0000988,2.12e-53,177;CL:0002087,3.71e-51,115;CL:0002032,2.84e-50,161;CL:0000837,2.84e-50,161;CL:0000763,1.44e-47,108;CL:0000049,1.44e-47,108;CL:0000134,1.70e-20,354;CL:0002320,1.14e-19,361;CL:0000219,2.65e-18,386;CL:0002393,5.97e-17,9;CL:0002397,5.97e-17,9;CL:0000034,5.68e-14,441;CL:0000048,7.15e-14,427;CL:0000723,2.22e-13,433;CL:0000094,1.01e-11,8;CL:0000624,1.01e-11,6;CL:0000081,3.52e-08,11;CL:0000791,3.09e-07,18;CL:0000789,3.09e-07,18;CL:0002420,3.09e-07,18;CL:0002419,3.09e-07,18;CL:0000790,3.09e-07,18;CL:0000775,5.74e-07,3;CL:0000623,6.48e-07,3;CL:0000825,6.48e-07,3;CL:0000784,8.90e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.14e-53;42!CL:0000049;3.46e-13;108!CL:0000790;2.32e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.78e-24!102;UBERON:0003061!2.78e-24!102;UBERON:0002371!1.55e-23!80;UBERON:0001474!1.42e-21!86;UBERON:0002193!1.90e-20!112;UBERON:0004765!3.51e-18!101;UBERON:0001434!3.51e-18!101;UBERON:0002384!1.32e-14!375;UBERON:0002405!1.85e-13!115;UBERON:0003081!4.72e-10!216;UBERON:0002204!4.34e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.03e-58,76;UBERON:0001474,9.67e-53,82;UBERON:0002390,1.95e-49,98;UBERON:0003061,1.95e-49,98;UBERON:0002405,6.07e-47,93;UBERON:0004765,1.11e-46,90;UBERON:0002193,2.46e-43,108;UBERON:0001434,1.80e-40,100;UBERON:0003081,8.45e-20,203;UBERON:0002384,2.88e-19,371;UBERON:0002204,3.16e-18,167;UBERON:0000926,2.97e-08,315;UBERON:0004120,2.97e-08,315;UBERON:0006603,2.97e-08,315 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0,0.872338524100369,0,0,0.522371256399677,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0.369363174230364,0.816002764977012,0.313454721478088,0.286235987131057,0.410623275218653,0.251085279189606,0.382067028739756,0.246301768349837,0.393553906568396,1.96682138424452,0.767658796194425,2.01260960310899,1.83884244895785,1.50602959389125,1.10926203050036,0.0774672005803016,0,3.81680571135301,3.87796785972314,3.40925560699241,3.68918480216948,0.447830948479849,0.32389366601898,0,1.59938062657521,1.51150377475524,1.69808842831471,4.41615170120801,4.11167888021826,4.64559556342655,7.19230980805376,5.89169625016932,4.96612682766029,10.3423704220986,3.87290810150296,5.41705946377367,3.20011977222428,3.27487380069415,2.24723484445085,8.57034898638527,7.06043859567406,5.11469700639233,2.30895910130701,3.59034583718937,0.852449501065388,4.93355705668593,6.24123747160254,3.73693349397345,5.02497330513487,2.60741459210101,3.04064382587163,4.23779651843358,5.15588690382591,3.48108626184973,2.5350634357433,4.889898899196,2.93522103711726,7.18903239337569,5.55654503513573,1.28580469357664,5.41524213108372,2.78483348078726,1.64397738388171,1.75996244461323,0.546138611262131,0,0.853460445133014,0,0,0,0,2.84606484554724,3.52342313622563,5.73409842187843,1.32171328579026,2.24203425192614,0.263384084775077,2.16380747125216,4.32311839024081,3.08402248499264,0.167186495390678,2.60737813306872,2.36723902867367,0,0.111410456885174,2.3568472597987,0.886135578334485,0.541607727530031,0.25618263945135,0.390178042679635,0.164437904603676,0,0,3.11401782640327,2.40786745280742,2.09071047609954,0.113309342697566,6.13152789763074,3.77990190030893,1.01207876807801,0.637130828648193,0.651083453856419,0,0.451725357233318,0,0,0,0,3.22570789159572,2.13952156626806,2.46201486600758,0,0,0,0,0.50133791063589,0,0.795285947051099,0,0.283604451492204,0,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,2.38490624305342,3.43196946468077,4.45749001595478,0.596287222100115,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0.760272105718513,0,0.367663080345869,0,0.17859945656816,0.44905874525234,0,1.53316637465883,0,0.366403487860815,5.27121669744253,3.87780264148325,0.436094052142534,0,0,0.264818361626438,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0.468642863667593,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0.646584227275248,0.355009592516614,0.201504196455281,0,0.386521706326594,0,0,0,0.265059536642971,0,0.10366105501537,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0,0.505754070234305,0,0.220587945464788,0,0,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0.491953754172454,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0.325808305310325,1.03993478527958,0,0.115930404975077,0,0,0.462985512576611,0,2.37061319387782,0.858486162094873,1.23108503043699,0.468008530278475,0.297262324577456,0,0.335964256397719,0.141775097242386,0,0,0,0,0,2.90259361757081,2.01767934783746,3.7872730027914,0.063497894292169,0.763976851116555,2.34434894420094,3.4214489204541,0,0.300343057843917,0.285826432630578,0.224262168690721,0.43596006883328,0,0.129271715757778,3.57656445851882,0.845302752556,0,0,0,0,0.532844358032199,0,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0,0,1.00451418286425,0,0,0,0,0.868687840005475,0.410952645100767,0,0,2.75843064282698,4.09692392233083,3.9786341246722,0,1.30139853857622,0,0.167516265334349,0.637938751653163,2.99602809578873,2.99161459204025,8.28831026872071,0,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0.368738337083406,0.347534457872331,0.587403472388222,0.343143423810856,0.413536052245775,1.50999940573032,1.28073069364133,0.303127571446259,1.66435439510497,1.20956117331872,0,0.153461973288062,0,0.512556597022804,0.511707249066704,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.232420756919918,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0.680374821106063,0,1.54227252690289,0,1.00337954770971,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0.290012154876366,0.308097234229289,0.307007349452259,0,0.107420244868274,0.145016693914229,0.426133137080504,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,0,0.62962469366128,0,0,0.532306030317022,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0.636406495851874,0,0.359744915166629,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0,0,0.545999645631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| ||
|short_description=p@chr4:106394656..106394684,+ | |short_description=p@chr4:106394656..106394684,+ | ||
}} | }} |
Latest revision as of 00:40, 30 July 2015
Short description: | p@chr4:106394656..106394684, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:106394656..106394684, + |
Coexpression cluster: | C686_CD14_immature_CD19_Eosinophils_migratory_Mast_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.03e-58 | 76 |
bone element | 9.67e-53 | 82 |
hematopoietic system | 1.95e-49 | 98 |
blood island | 1.95e-49 | 98 |
immune system | 6.07e-47 | 93 |
skeletal element | 1.11e-46 | 90 |
hemolymphoid system | 2.46e-43 | 108 |
skeletal system | 1.80e-40 | 100 |
lateral plate mesoderm | 8.45e-20 | 203 |
connective tissue | 2.88e-19 | 371 |
musculoskeletal system | 3.16e-18 | 167 |
mesoderm | 2.97e-08 | 315 |
mesoderm-derived structure | 2.97e-08 | 315 |
presumptive mesoderm | 2.97e-08 | 315 |