FFCP PHASE1:Hg19::chr4:119951459..119951470,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:119951459..119951470,+
|short_description=p@chr4:119951459..119951470,+
|description=CAGE_peak_at_chr4:119951459..119951470,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:119951459..119951470,+ | |||
|coexpression_cluster_id=C669 | |||
|description=CAGE_peak_at_chr4:119951459..119951470,+ | |||
|id=chr4:119951459..119951470,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.07e-11;1!CL:0002625;1.07e-11;1!CL:0000216;1.07e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,6.97e-12,1;CL:0002625,6.97e-12,1;CL:0000216,6.97e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.27e-12;1!UBERON:0009143;4.53e-12;1!UBERON:0004874;4.53e-12;1!UBERON:0001045;1.07e-11;1!UBERON:0006242;1.07e-11;1!UBERON:0007297;9.96e-07;2 | |||
|ontology_enrichment_disease=DOID:0060084!2.76e-07!3;DOID:127!2.76e-07!3 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.77e-16!115;UBERON:0005904!4.87e-09!4;UBERON:0003135!2.70e-08!11;UBERON:0003133!1.17e-07!48;UBERON:0005156!4.05e-07!59;UBERON:0000990!4.05e-07!59;UBERON:0006947!4.99e-07!3;UBERON:0004054!4.99e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;3.35e-24;4!UBERON:0003135;1.34e-15;11!UBERON:0006947;4.28e-15;3!UBERON:0004054;4.28e-15;3!UBERON:0001723;5.29e-15;3!UBERON:0001033;5.29e-15;3!UBERON:0001389;2.63e-12;1!UBERON:0000026;2.63e-12;1!UBERON:0008784;2.63e-12;1!UBERON:0006058;2.63e-12;1!UBERON:0003663;2.63e-12;1!UBERON:0004256;2.63e-12;1!UBERON:0004708;2.63e-12;1!UBERON:0002101;2.63e-12;1!UBERON:0004709;2.63e-12;1!UBERON:0002529;2.63e-12;1!UBERON:0010538;2.63e-12;1!UBERON:0003661;2.63e-12;1!UBERON:0010890;2.63e-12;1!UBERON:0002471;2.63e-12;1!UBERON:0001383;2.63e-12;1!UBERON:0010758;2.63e-12;1!UBERON:0010707;2.63e-12;1!UBERON:0000978;2.63e-12;1!UBERON:0002103;2.63e-12;1!UBERON:0001665;2.63e-12;1!UBERON:0003823;2.63e-12;1!UBERON:0000154;2.63e-12;1!UBERON:0010709;2.63e-12;1!UBERON:0000998;3.27e-12;1!UBERON:0006868;3.27e-12;1!UBERON:0000989;4.53e-12;1!UBERON:0008811;4.53e-12;1!UBERON:0001154;1.07e-11;1!UBERON:0001000;1.07e-11;1!UBERON:0001136;1.07e-11;1!UBERON:0001153;1.07e-11;1!UBERON:0001343;1.07e-11;1!UBERON:0009854;1.07e-11;1!UBERON:0004910;1.07e-11;1!UBERON:0004813;1.07e-11;1!UBERON:0005352;1.07e-11;1!UBERON:0000058;4.81e-10;10!UBERON:0003101;6.66e-08;22!UBERON:0000079;6.66e-08;22!UBERON:0005090;8.93e-07;2!UBERON:0001630;8.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.92e-24,4;UBERON:0003135,9.53e-16,11;UBERON:0006947,3.46e-15,3;UBERON:0004054,3.46e-15,3;UBERON:0001723,3.72e-15,3;UBERON:0001033,3.72e-15,3;UBERON:0010056,3.72e-15,3;UBERON:0005418,2.63e-12,1;UBERON:0001389,2.63e-12,1;UBERON:0000026,2.63e-12,1;UBERON:0008784,2.63e-12,1;UBERON:0006058,2.63e-12,1;UBERON:0003663,2.63e-12,1;UBERON:0004256,2.63e-12,1;UBERON:0004708,2.63e-12,1;UBERON:0002101,2.63e-12,1;UBERON:0004709,2.63e-12,1;UBERON:0002529,2.63e-12,1;UBERON:0010538,2.63e-12,1;UBERON:0003661,2.63e-12,1;UBERON:0010890,2.63e-12,1;UBERON:0002471,2.63e-12,1;UBERON:0001383,2.63e-12,1;UBERON:0004357,2.63e-12,1;UBERON:0004347,2.63e-12,1;UBERON:0005420,2.63e-12,1;UBERON:0005732,2.63e-12,1;UBERON:0010758,2.63e-12,1;UBERON:0010707,2.63e-12,1;UBERON:0000978,2.63e-12,1;UBERON:0002103,2.63e-12,1;UBERON:0001665,2.63e-12,1;UBERON:0003823,2.63e-12,1;UBERON:0000154,2.63e-12,1;UBERON:0010709,2.63e-12,1;UBERON:0005733,2.63e-12,1;UBERON:0005730,2.63e-12,1;UBERON:0000998,3.27e-12,1;UBERON:0006868,3.27e-12,1;UBERON:0000989,3.65e-12,1;UBERON:0008811,3.65e-12,1;UBERON:0006258,3.65e-12,1;UBERON:0005876,3.65e-12,1;UBERON:0004874,3.65e-12,1;UBERON:0001136,6.97e-12,1;UBERON:0001343,6.97e-12,1;UBERON:0004910,6.97e-12,1;UBERON:0005154,6.97e-12,1;UBERON:0005295,6.97e-12,1;UBERON:0004813,6.97e-12,1;UBERON:0005297,6.97e-12,1;UBERON:0005294,6.97e-12,1;UBERON:0010141,6.97e-12,1;UBERON:0005891,6.97e-12,1;UBERON:0001000,7.76e-12,1;UBERON:0005352,7.76e-12,1;UBERON:0001154,1.19e-11,1;UBERON:0001153,1.19e-11,1;UBERON:0001045,1.19e-11,1;UBERON:0007023,1.04e-09,114;UBERON:0004876,2.38e-09,11;UBERON:0003101,5.65e-08,22;UBERON:0000079,5.65e-08,22;UBERON:0005090,8.93e-07,2;UBERON:0001630,8.93e-07,2 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.422863212287913,0,1.34088328328186,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,1.27867425159808,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0.605399502633369,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.515281080091258,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.841980283299221,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,1.10513566212459,0,0.102268682502155,0,0.622079175323615,0,0,0,2.46608514092334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,2.23074737923365,0,0.451961481561065,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.798716001995964,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.796191777397232,0.800055529326307,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,11.6537190693821,2.66923297826242,0,0,0,0,0,0,0,0,0.308696632431779,0.437119121007915,0,6.61900468735545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.852935927603924,0,0,0,0,0.0636471582781649,0.202117188958219,2.61260097476354,1.71116650542641,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0.488965776731466,0.813792356631477,0,0.805095174364105,0 | |phase1_expression=0.181678379270557,1.07050261945492,0.422863212287913,0,1.34088328328186,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,1.27867425159808,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0.605399502633369,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.515281080091258,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.841980283299221,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,1.10513566212459,0,0.102268682502155,0,0.622079175323615,0,0,0,2.46608514092334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,2.23074737923365,0,0.451961481561065,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.798716001995964,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.796191777397232,0.800055529326307,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,11.6537190693821,2.66923297826242,0,0,0,0,0,0,0,0,0.308696632431779,0.437119121007915,0,6.61900468735545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.852935927603924,0,0,0,0,0.0636471582781649,0.202117188958219,2.61260097476354,1.71116650542641,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0.488965776731466,0.813792356631477,0,0.805095174364105,0 | ||
|short_description=p@chr4:119951459..119951470,+ | |||
}} | }} |
Latest revision as of 01:15, 30 July 2015
Short description: | p@chr4:119951459..119951470, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:119951459..119951470, + |
Coexpression cluster: | C669_skeletal_smooth_bladder_esophagus_prostate_penis_ductus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 6.97e-12 | 1 |
seminiferous tubule epithelial cell | 6.97e-12 | 1 |
Sertoli cell | 6.97e-12 | 1 |