FFCP PHASE1:Hg19::chr4:145568170..145568180,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:145568170..145568180,- | |||
|coexpression_cluster_id=C386 | |||
|description=CAGE_peak_at_chr4:145568170..145568180,- | |description=CAGE_peak_at_chr4:145568170..145568180,- | ||
|id=chr4:145568170..145568180,- | |id=chr4:145568170..145568180,- | ||
|ontology_enrichment_celltype=CL:0000115!4.88e-21!35;CL:0002139!1.34e-18!24;CL:0002078!3.70e-16!44;CL:0005020!2.79e-13!6;CL:0002138!2.79e-13!6;CL:0005022!2.79e-13!6;CL:0000666!5.71e-12!4;CL:0002188!5.71e-12!4;CL:0000213!7.71e-12!57;CL:0000215!7.71e-12!57;CL:0000071!2.51e-09!18;CL:0002546!2.51e-09!18;CL:1000612!5.14e-07!7;CL:1000746!5.14e-07!7 | |ontology_enrichment_celltype=CL:0000115!4.88e-21!35;CL:0002139!1.34e-18!24;CL:0002078!3.70e-16!44;CL:0005020!2.79e-13!6;CL:0002138!2.79e-13!6;CL:0005022!2.79e-13!6;CL:0000666!5.71e-12!4;CL:0002188!5.71e-12!4;CL:0000213!7.71e-12!57;CL:0000215!7.71e-12!57;CL:0000071!2.51e-09!18;CL:0002546!2.51e-09!18;CL:1000612!5.14e-07!7;CL:1000746!5.14e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002188;3.55e-27;5!CL:1000746;9.48e-20;7!CL:1000612;9.48e-20;7!CL:0000084;1.07e-12;25!CL:0002681;5.67e-12;12!CL:0002584;5.67e-12;12!CL:1000449;8.85e-10;15!CL:1000497;9.62e-09;17!CL:0002518;9.62e-09;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.11e-27,5;CL:1000746,8.62e-20,7;CL:1000612,8.62e-20,7;CL:0000084,1.13e-12,25;CL:0000827,1.13e-12,25;CL:0002681,5.37e-12,12;CL:0002584,5.37e-12,12;CL:1000449,8.46e-10,15;CL:1000497,9.25e-09,17;CL:0002518,9.25e-09,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1240;4.35e-12;39!DOID:2531;1.15e-08;51!DOID:0060083;1.15e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.95e-14,39;DOID:2531,6.05e-11,51;DOID:0060083,6.05e-11,51 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000074;9.48e-20;7!UBERON:0001229;9.48e-20;7!UBERON:0001225;5.67e-12;12!UBERON:0008987;5.67e-12;12!UBERON:0001851;8.85e-10;15!UBERON:0006555;8.85e-10;15!UBERON:0000353;8.85e-10;15!UBERON:0004819;8.85e-10;15!UBERON:0001285;8.85e-10;15!UBERON:0007684;8.85e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,8.62e-20,7;UBERON:0000074,8.62e-20,7;UBERON:0001229,8.62e-20,7;UBERON:0001230,8.62e-20,7;UBERON:0003220,8.62e-20,7;UBERON:0005749,8.62e-20,7;UBERON:0004199,8.62e-20,7;UBERON:0004209,8.62e-20,7;UBERON:0004198,8.62e-20,7;UBERON:0005103,1.85e-17,8;UBERON:0000083,1.85e-17,8;UBERON:0009201,1.85e-17,8;UBERON:0006553,1.85e-17,8;UBERON:0003074,1.85e-17,8;UBERON:0003060,1.85e-17,8;UBERON:0000080,1.22e-15,9;UBERON:0002120,1.22e-15,9;UBERON:0004875,1.22e-15,9;UBERON:0005721,1.22e-15,9;UBERON:0005754,1.22e-15,9;UBERON:0007297,1.22e-15,9;UBERON:0004876,5.42e-13,11;UBERON:0001225,5.37e-12,12;UBERON:0008987,5.37e-12,12;UBERON:0003887,5.37e-12,12;UBERON:0001851,8.46e-10,15;UBERON:0004211,8.46e-10,15;UBERON:0009773,8.46e-10,15;UBERON:0000353,8.46e-10,15;UBERON:0001231,8.46e-10,15;UBERON:0001285,8.46e-10,15;UBERON:0007684,8.46e-10,15;UBERON:0004208,8.46e-10,15;UBERON:0006555,3.01e-09,16;UBERON:0004819,3.01e-09,16;UBERON:0000058,6.15e-08,19 | |||
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|short_description=p@chr4:145568170..145568180,- | |short_description=p@chr4:145568170..145568180,- | ||
}} | }} |
Latest revision as of 02:00, 30 July 2015
Short description: | p@chr4:145568170..145568180, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:145568170..145568180, - |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.11e-27 | 5 |
glomerular cell | 8.62e-20 | 7 |
kidney corpuscule cell | 8.62e-20 | 7 |
T cell | 1.13e-12 | 25 |
pro-T cell | 1.13e-12 | 25 |
kidney cortical cell | 5.37e-12 | 12 |
renal cortical epithelial cell | 5.37e-12 | 12 |
epithelial cell of nephron | 8.46e-10 | 15 |
kidney cell | 9.25e-09 | 17 |
kidney epithelial cell | 9.25e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 8.62e-20 | 7 |
renal glomerulus | 8.62e-20 | 7 |
renal corpuscle | 8.62e-20 | 7 |
glomerular capsule | 8.62e-20 | 7 |
metanephric mesenchyme | 8.62e-20 | 7 |
glomerular tuft | 8.62e-20 | 7 |
S-shaped body | 8.62e-20 | 7 |
renal vesicle | 8.62e-20 | 7 |
comma-shaped body | 8.62e-20 | 7 |
mesonephric epithelium | 1.85e-17 | 8 |
mesonephric tubule | 1.85e-17 | 8 |
nephric duct | 1.85e-17 | 8 |
renal duct | 1.85e-17 | 8 |
mesonephric duct | 1.85e-17 | 8 |
pronephric duct | 1.85e-17 | 8 |
mesonephros | 1.22e-15 | 9 |
pronephros | 1.22e-15 | 9 |
nephrogenic cord | 1.22e-15 | 9 |
pronephric mesoderm | 1.22e-15 | 9 |
rostral part of nephrogenic cord | 1.22e-15 | 9 |
presumptive pronephric mesoderm | 1.22e-15 | 9 |
urogenital ridge | 5.42e-13 | 11 |
cortex of kidney | 5.37e-12 | 12 |
renal parenchyma | 5.37e-12 | 12 |
intraembryonic coelom | 5.37e-12 | 12 |
cortex | 8.46e-10 | 15 |
nephron epithelium | 8.46e-10 | 15 |
renal tubule | 8.46e-10 | 15 |
parenchyma | 8.46e-10 | 15 |
nephron tubule | 8.46e-10 | 15 |
nephron | 8.46e-10 | 15 |
uriniferous tubule | 8.46e-10 | 15 |
nephrogenic mesenchyme | 8.46e-10 | 15 |
excretory tube | 3.01e-09 | 16 |
kidney epithelium | 3.01e-09 | 16 |
duct | 6.15e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.95e-14 | 39 |
hematologic cancer | 6.05e-11 | 51 |
immune system cancer | 6.05e-11 | 51 |