FFCP PHASE1:Hg19::chr4:24053554..24053559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:24053554..24053559,- | |||
|coexpression_cluster_id=C449 | |coexpression_cluster_id=C449 | ||
|description=CAGE_peak_at_chr4:24053554..24053559,- | |description=CAGE_peak_at_chr4:24053554..24053559,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.64e-26;1!UBERON:0003056;1.60e-09;3 | |ontology_enrichment_development_v019=UBERON:0005425;8.64e-26;1!UBERON:0003056;1.60e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;3.83e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;3.83e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,3.90e-08,14 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.16e-26,1;UBERON:0005056,2.16e-26,1;UBERON:0000941,7.62e-26,1;UBERON:0001785,7.62e-26,1;UBERON:0002464,7.62e-26,1;UBERON:0004904,7.62e-26,1;UBERON:0001021,7.62e-26,1;UBERON:0003902,7.62e-26,1;UBERON:0005425,7.62e-26,1;UBERON:0001905,1.07e-13,2;UBERON:0002757,1.07e-13,2;UBERON:0010134,1.07e-13,2;UBERON:0005408,1.07e-13,2;UBERON:0001899,1.07e-13,2;UBERON:0003714,1.21e-13,2;UBERON:0005162,1.21e-13,2;UBERON:0000122,1.21e-13,2;UBERON:0003296,1.69e-07,4;UBERON:0010133,1.69e-07,4;UBERON:0002784,1.69e-07,4;UBERON:0001781,1.80e-07,4;UBERON:0002368,5.08e-07,35 | |||
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| ||
|short_description=p@chr4:24053554..24053559,- | |short_description=p@chr4:24053554..24053559,- | ||
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Latest revision as of 04:27, 30 July 2015
Short description: | p@chr4:24053554..24053559, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:24053554..24053559, - |
Coexpression cluster: | C449_epidermoid_anaplastic_occipital_oral_middle_Wilms_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mammalian vulva | 2.16e-26 | 1 |
external female genitalia | 2.16e-26 | 1 |
cranial nerve II | 7.62e-26 | 1 |
cranial nerve | 7.62e-26 | 1 |
nerve trunk | 7.62e-26 | 1 |
nerve connecting eye with brain | 7.62e-26 | 1 |
nerve | 7.62e-26 | 1 |
retinal neural layer | 7.62e-26 | 1 |
presumptive neural retina | 7.62e-26 | 1 |
pineal body | 1.07e-13 | 2 |
regional part of epithalamus | 1.07e-13 | 2 |
secretory circumventricular organ | 1.07e-13 | 2 |
circumventricular organ | 1.07e-13 | 2 |
epithalamus | 1.07e-13 | 2 |
neural tissue | 1.21e-13 | 2 |
multi cell component structure | 1.21e-13 | 2 |
neuron projection bundle | 1.21e-13 | 2 |
gland of diencephalon | 1.69e-07 | 4 |
neuroendocrine gland | 1.69e-07 | 4 |
regional part of diencephalon | 1.69e-07 | 4 |
layer of retina | 1.80e-07 | 4 |
endocrine gland | 5.08e-07 | 35 |
Ontology term | p-value | n |
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squamous cell carcinoma | 3.90e-08 | 14 |